RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 TMEM57Q8N5G2 664 aa16.55■□□□□ 0.24
NOP56-220ENST00000616692 SEC16BQ96JE7 1060 aa16.55■□□□□ 0.24
NOP56-220ENST00000616692 LUC7L2Q9Y383 392 aaKnown RBP16.55■□□□□ 0.24
NOP56-220ENST00000616692 ACADSP16219 412 aa16.55■□□□□ 0.24
NOP56-220ENST00000616692 MDH1P40925 334 aaKnown RBP16.55■□□□□ 0.24
NOP56-220ENST00000616692 CCNFP41002 786 aa16.55■□□□□ 0.24
NOP56-220ENST00000616692 FBXO33Q7Z6M2 555 aa16.55■□□□□ 0.24
NOP56-220ENST00000616692 FAM83AQ86UY5 434 aa16.55■□□□□ 0.24
NOP56-220ENST00000616692 LONP2Q86WA8 852 aa16.55■□□□□ 0.24
NOP56-220ENST00000616692 PDCD7Q8N8D1 485 aaKnown RBP16.55■□□□□ 0.24
NOP56-220ENST00000616692 TCF12Q99081 682 aa16.55■□□□□ 0.24
NOP56-220ENST00000616692 MUC3BQ9H195 1237 aa16.55■□□□□ 0.24
NOP56-220ENST00000616692 STK39Q9UEW8 545 aa16.55■□□□□ 0.24
NOP56-220ENST00000616692 SLC12A4Q9UP95 1085 aa16.55■□□□□ 0.24
NOP56-220ENST00000616692 CLRN2A0PK11 232 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 SPECC1L-ADORA2AF8WAN1 911 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 MYCP01106 439 aaPredicted RBP16.54■□□□□ 0.24
NOP56-220ENST00000616692 KARSQ15046 597 aaKnown RBP16.54■□□□□ 0.24
NOP56-220ENST00000616692 SH3D19Q5HYK7 790 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 MFSD14BQ5SR56 506 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 NLRP9Q7RTR0 991 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 TBC1D1Q86TI0 1168 aaPredicted RBP16.54■□□□□ 0.24
NOP56-220ENST00000616692 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.54■□□□□ 0.242e-19■■■□□ 18.1
NOP56-220ENST00000616692 CD99L2Q8TCZ2 262 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 PARVBQ9HBI1 364 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 CTNNAL1Q9UBT7 734 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 SEC63Q9UGP8 760 aaKnown RBP16.54■□□□□ 0.24
NOP56-220ENST00000616692 NOX1Q9Y5S8 564 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 LOC105371267A0A1B0GV96 52 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 DGKIO75912 1065 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 BIRC3Q13489 604 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 E2F2Q14209 437 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 WDR45BQ5MNZ6 344 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 PTPN18Q99952 460 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 TMEM106CQ9BVX2 250 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 PLCB1Q9NQ66 1216 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 TTF2Q9UNY4 1162 aaKnown RBP16.54■□□□□ 0.24
NOP56-220ENST00000616692 CSADQ9Y600 493 aa16.54■□□□□ 0.24
NOP56-220ENST00000616692 TSPAN1O60635 241 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 SERPINB7O75635 380 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 TKTP29401 623 aaKnown RBP16.53■□□□□ 0.24
NOP56-220ENST00000616692 ZNF131P52739 623 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 TMTC4Q5T4D3 741 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 RASIP1Q5U651 963 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 PCNX4Q63HM2 1172 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 MLKLQ8NB16 471 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 GSDMBQ8TAX9 411 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 ZNF333Q96JL9 665 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 FAM84BQ96KN1 310 aaPredicted RBP16.53■□□□□ 0.24
NOP56-220ENST00000616692 PRPF18Q99633 342 aaKnown RBP16.53■□□□□ 0.24
NOP56-220ENST00000616692 SPATA16Q9BXB7 569 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 TYW1Q9NV66 732 aaKnown RBP16.53■□□□□ 0.24
NOP56-220ENST00000616692 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.53■□□□□ 0.24
NOP56-220ENST00000616692 USH1CQ9Y6N9 552 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 TNRC18O15417 2968 aaPredicted RBP16.53■□□□□ 0.24
NOP56-220ENST00000616692 MAP3K7O43318 606 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 CETPP11597 493 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 CRKP46108 304 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 PEX5P50542 639 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 HABP4Q5JVS0 413 aaKnown RBP16.53■□□□□ 0.24
NOP56-220ENST00000616692 DEPDC1Q5TB30 811 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 PHLDB3Q6NSJ2 640 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 TMEM214Q6NUQ4 689 aaKnown RBP16.53■□□□□ 0.24
NOP56-220ENST00000616692 CCDC127Q96BQ5 260 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 KANSL1LA0AUZ9 987 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 CTAGE9A4FU28 777 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 C5orf60A6NFR6 353 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 APOEP02649 317 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 SDSP20132 328 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 COX10Q12887 443 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 KIF22Q14807 665 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 TOGARAM2Q6ZUX3 1019 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 ANKRD44Q8N8A2 993 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 PPFIBP2Q8ND30 876 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 GLT8D2Q9H1C3 349 aa16.53■□□□□ 0.24
NOP56-220ENST00000616692 C9orf78Q9NZ63 289 aaPredicted RBP16.53■□□□□ 0.24
NOP56-220ENST00000616692 EXOSC9Q06265 439 aaKnown RBP16.52■□□□□ 0.24
NOP56-220ENST00000616692 FNBP1Q96RU3 617 aa16.52■□□□□ 0.24
NOP56-220ENST00000616692 DCAF16Q9NXF7 216 aa16.52■□□□□ 0.24
NOP56-220ENST00000616692 PCSK1NQ9UHG2 260 aa16.52■□□□□ 0.24
NOP56-220ENST00000616692 INTUQ9ULD6 942 aa16.52■□□□□ 0.24
NOP56-220ENST00000616692 E7ENQ6 273 aa16.52■□□□□ 0.23
NOP56-220ENST00000616692 F8W031 263 aaPredicted RBP16.52■□□□□ 0.23
NOP56-220ENST00000616692 ETV3P41162 512 aa16.52■□□□□ 0.23
NOP56-220ENST00000616692 ACADSBP45954 432 aa16.52■□□□□ 0.23
NOP56-220ENST00000616692 SERPINB8P50452 374 aa16.52■□□□□ 0.23
NOP56-220ENST00000616692 GUCY2DQ02846 1103 aa16.52■□□□□ 0.23
NOP56-220ENST00000616692 ERO1BQ86YB8 467 aa16.52■□□□□ 0.23
NOP56-220ENST00000616692 SH2D3CQ8N5H7 860 aa16.52■□□□□ 0.23
NOP56-220ENST00000616692 BRI3BPQ8WY22 251 aa16.52■□□□□ 0.23
NOP56-220ENST00000616692 SENP7Q9BQF6 1050 aa16.52■□□□□ 0.23
NOP56-220ENST00000616692 SCAND2PQ9GZW5 306 aaPredicted RBP16.52■□□□□ 0.23
NOP56-220ENST00000616692 ELP3Q9H9T3 547 aa16.52■□□□□ 0.23
NOP56-220ENST00000616692 PDP2Q9P2J9 529 aa16.52■□□□□ 0.23
NOP56-220ENST00000616692 GMNCA6NCL1 334 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 NQO1P15559 274 aaKnown RBP16.51■□□□□ 0.23
NOP56-220ENST00000616692 NNTQ13423 1086 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 MUM1Q2TAK8 710 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 EPHA10Q5JZY3 1008 aa16.51■□□□□ 0.23
NOP56-220ENST00000616692 DAB2IPQ5VWQ8 1189 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms