RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 NAALADL2Q58DX5 795 aa35.33■■■■□ 3.25
FMR1-216ENST00000616614 TMCO2Q7Z6W1 182 aaPredicted RBP35.33■■■■□ 3.25
FMR1-216ENST00000616614 RNF149Q8NC42 400 aa35.33■■■■□ 3.25
FMR1-216ENST00000616614 LINC01599Q8WXQ3 324 aa35.33■■■■□ 3.25
FMR1-216ENST00000616614 BSNDQ8WZ55 320 aa35.33■■■■□ 3.25
FMR1-216ENST00000616614 RAD54LQ92698 747 aa35.33■■■■□ 3.25
FMR1-216ENST00000616614 GCOM2Q9BZD3 368 aaPredicted RBP35.33■■■■□ 3.25
FMR1-216ENST00000616614 MTIF3Q9H2K0 278 aaKnown RBP35.33■■■■□ 3.25
FMR1-216ENST00000616614 MCM6Q14566 821 aa35.32■■■■□ 3.25
FMR1-216ENST00000616614 MXD4Q14582 209 aaPredicted RBP35.32■■■■□ 3.25
FMR1-216ENST00000616614 SPATA32Q96LK8 384 aa35.32■■■■□ 3.25
FMR1-216ENST00000616614 MINDY3Q9H8M7 445 aa35.32■■■■□ 3.25
FMR1-216ENST00000616614 CIZ1Q9ULV3 898 aaPredicted RBP35.32■■■■□ 3.25
FMR1-216ENST00000616614 ARSHQ5FYA8 562 aa35.32■■■■□ 3.24
FMR1-216ENST00000616614 DAW1Q8N136 415 aa35.32■■■■□ 3.24
FMR1-216ENST00000616614 GDPD2Q9HCC8 539 aa35.32■■■■□ 3.24
FMR1-216ENST00000616614 CCDC39Q9UFE4 941 aa35.32■■■■□ 3.24
FMR1-216ENST00000616614 ENPP3O14638 875 aa35.31■■■■□ 3.24
FMR1-216ENST00000616614 GPR182O15218 404 aa35.31■■■■□ 3.24
FMR1-216ENST00000616614 MGEA5O60502 916 aa35.31■■■■□ 3.24
FMR1-216ENST00000616614 NPHP3-ACAD11A0A0J9YXS1 232 aa35.3■■■■□ 3.24
FMR1-216ENST00000616614 TXLNAP40222 546 aa35.3■■■■□ 3.24
FMR1-216ENST00000616614 MAPK7Q13164 816 aa35.3■■■■□ 3.24
FMR1-216ENST00000616614 DHX8Q14562 1220 aaKnown RBP35.3■■■■□ 3.24
FMR1-216ENST00000616614 EFCAB14O75071 495 aa35.29■■■■□ 3.24
FMR1-216ENST00000616614 ATP2A2P16615 1042 aaKnown RBP35.29■■■■□ 3.24
FMR1-216ENST00000616614 RAD51AP2Q09MP3 1159 aa35.29■■■■□ 3.24
FMR1-216ENST00000616614 RRAGBQ5VZM2 374 aa35.29■■■■□ 3.24
FMR1-216ENST00000616614 HSFX4A0A1B0GTS1 333 aaPredicted RBP35.28■■■■□ 3.24
FMR1-216ENST00000616614 HSFX3A0A1B0GWH4 333 aaPredicted RBP35.28■■■■□ 3.24
FMR1-216ENST00000616614 HIP1RO75146 1068 aa35.28■■■■□ 3.24
FMR1-216ENST00000616614 GUCY2CP25092 1073 aa35.28■■■■□ 3.24
FMR1-216ENST00000616614 KCNJ6P48051 423 aa35.28■■■■□ 3.24
FMR1-216ENST00000616614 PTENP60484 403 aa35.28■■■■□ 3.24
FMR1-216ENST00000616614 PDILTQ8N807 584 aa35.28■■■■□ 3.24
FMR1-216ENST00000616614 LARP4BQ92615 738 aaKnown RBP35.28■■■■□ 3.24
FMR1-216ENST00000616614 POU5F1BQ06416 359 aa35.27■■■■□ 3.24
FMR1-216ENST00000616614 DSC3Q14574 896 aa35.27■■■■□ 3.24
FMR1-216ENST00000616614 RESP18Q5W5W9 173 aa35.27■■■■□ 3.24
FMR1-216ENST00000616614 LRCH3Q96II8 777 aa35.27■■■■□ 3.24
FMR1-216ENST00000616614 SCAND2PQ9GZW5 306 aaPredicted RBP35.27■■■■□ 3.24
FMR1-216ENST00000616614 LOXHD1Q8IVV2 1947 aa35.27■■■■□ 3.24
FMR1-216ENST00000616614 RABGGTBP53611 331 aa35.26■■■■□ 3.24
FMR1-216ENST00000616614 TFDP1Q14186 410 aa35.26■■■■□ 3.24
FMR1-216ENST00000616614 SRGAP1Q7Z6B7 1085 aa35.26■■■■□ 3.24
FMR1-216ENST00000616614 GPBP1Q86WP2 473 aa35.26■■■■□ 3.24
FMR1-216ENST00000616614 IFNLR1Q8IU57 520 aaPredicted RBP35.26■■■■□ 3.24
FMR1-216ENST00000616614 PHOSPHO2Q8TCD6 241 aa35.26■■■■□ 3.24
FMR1-216ENST00000616614 KIFAP3Q92845 792 aa35.26■■■■□ 3.24
FMR1-216ENST00000616614 SLC9A7Q96T83 725 aa35.26■■■■□ 3.24
FMR1-216ENST00000616614 FTHL17Q9BXU8 183 aa35.26■■■■□ 3.24
FMR1-216ENST00000616614 TSPYL2Q9H2G4 693 aaPredicted RBP35.26■■■■□ 3.24
FMR1-216ENST00000616614 STK17AQ9UEE5 414 aa35.26■■■■□ 3.24
FMR1-216ENST00000616614 SFI1A8K8P3 1242 aa35.25■■■■□ 3.23
FMR1-216ENST00000616614 PBX2P40425 430 aa35.25■■■■□ 3.23
FMR1-216ENST00000616614 PHKA2P46019 1235 aa35.25■■■■□ 3.23
FMR1-216ENST00000616614 CACNB1Q02641 598 aaPredicted RBP35.25■■■■□ 3.23
FMR1-216ENST00000616614 ODR4Q5SWX8 454 aa35.25■■■■□ 3.23
FMR1-216ENST00000616614 CCDC73Q6ZRK6 1079 aa35.25■■■■□ 3.23
FMR1-216ENST00000616614 INO80BQ9C086 356 aaPredicted RBP35.25■■■■□ 3.23
FMR1-216ENST00000616614 E2F4Q16254 413 aa35.24■■■■□ 3.23
FMR1-216ENST00000616614 HERC6Q8IVU3 1022 aa35.24■■■■□ 3.23
FMR1-216ENST00000616614 MYOCDQ8IZQ8 938 aa35.24■■■■□ 3.23
FMR1-216ENST00000616614 ADAM2Q99965 735 aa35.24■■■■□ 3.23
FMR1-216ENST00000616614 NFKBIZQ9BYH8 718 aa35.24■■■■□ 3.23
FMR1-216ENST00000616614 KCND2Q9NZV8 630 aa35.24■■■■□ 3.23
FMR1-216ENST00000616614 LRRIQ4A6NIV6 560 aa35.23■■■■□ 3.23
FMR1-216ENST00000616614 AMHP03971 560 aa35.23■■■■□ 3.23
FMR1-216ENST00000616614 SMAD3P84022 425 aaKnown RBP35.23■■■■□ 3.23
FMR1-216ENST00000616614 MBTD1Q05BQ5 628 aa35.23■■■■□ 3.23
FMR1-216ENST00000616614 ADALQ6DHV7 355 aa35.23■■■■□ 3.23
FMR1-216ENST00000616614 KIFC3Q9BVG8 833 aa35.23■■■■□ 3.23
FMR1-216ENST00000616614 PBX4Q9BYU1 374 aa35.23■■■■□ 3.23
FMR1-216ENST00000616614 CHMP5Q9NZZ3 219 aa35.23■■■■□ 3.23
FMR1-216ENST00000616614 SFPQP23246 707 aaKnown RBP eCLIP35.23■■■■□ 3.23
FMR1-216ENST00000616614 STAT6P42226 847 aa35.23■■■■□ 3.23
FMR1-216ENST00000616614 FXR1P51114 621 aaKnown RBP eCLIP35.23■■■■□ 3.23
FMR1-216ENST00000616614 CATSPER4Q7RTX7 472 aa35.23■■■■□ 3.23
FMR1-216ENST00000616614 TOP1MTQ969P6 601 aa35.23■■■■□ 3.23
FMR1-216ENST00000616614 RGS18Q9NS28 235 aa35.23■■■■□ 3.23
FMR1-216ENST00000616614 ADGRA3Q8IWK6 1321 aa35.22■■■■□ 3.23
FMR1-216ENST00000616614 MYOGP15173 224 aa35.22■■■■□ 3.23
FMR1-216ENST00000616614 NAMPTP43490 491 aa35.22■■■■□ 3.23
FMR1-216ENST00000616614 CDCA2Q69YH5 1023 aaPredicted RBP35.22■■■■□ 3.23
FMR1-216ENST00000616614 FAM117BQ6P1L5 589 aa35.22■■■■□ 3.23
FMR1-216ENST00000616614 CRIPAKQ8N1N5 446 aa35.22■■■■□ 3.23
FMR1-216ENST00000616614 REEP2Q9BRK0 252 aa35.22■■■■□ 3.23
FMR1-216ENST00000616614 TIPINQ9BVW5 301 aa35.22■■■■□ 3.23
FMR1-216ENST00000616614 GIT2Q14161 759 aa35.21■■■■□ 3.23
FMR1-216ENST00000616614 AMHR2Q16671 573 aa35.21■■■■□ 3.23
FMR1-216ENST00000616614 DRC1Q96MC2 740 aa35.21■■■■□ 3.23
FMR1-216ENST00000616614 IPO9Q96P70 1041 aaKnown RBP35.21■■■■□ 3.23
FMR1-216ENST00000616614 YBX2Q9Y2T7 364 aaKnown RBP35.21■■■■□ 3.23
FMR1-216ENST00000616614 MICAL3Q7RTP6 2002 aa35.2■■■■□ 3.23
FMR1-216ENST00000616614 DENND3A2RUS2 1198 aa35.2■■■■□ 3.23
FMR1-216ENST00000616614 INO80B-WBP1J3KQ70 363 aa35.2■■■■□ 3.23
FMR1-216ENST00000616614 UPP2O95045 317 aa35.2■■■■□ 3.23
FMR1-216ENST00000616614 GJB5O95377 273 aa35.2■■■■□ 3.23
FMR1-216ENST00000616614 CMA1P23946 247 aa35.2■■■■□ 3.23
FMR1-216ENST00000616614 HOXA11P31270 313 aaPredicted RBP35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms