RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 RNF26Q9BY78 433 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 OLA1Q9NTK5 396 aaKnown RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 RWDD2AQ9UIY3 292 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 MAGEA2P43356 314 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 KRT40Q6A162 431 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 MIGA1Q8NAN2 632 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 ARHGEF1Q92888 912 aaKnown RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 UBE4BO95155 1302 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 B4DLN1 442 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 ECM2O94769 699 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 SETDB2Q96T68 719 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 ZNF806P0C7X5 589 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 LARP6Q9BRS8 491 aaKnown RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 SUN2Q9UH99 717 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 SAP30BPQ9UHR5 308 aaKnown RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 MAGEA13PA6NCF6 341 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 SNTNA6NMZ2 147 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 AKNAD1Q5T1N1 836 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 TBC1D9BQ66K14 1250 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 SYTL5Q8TDW5 730 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 FAM161BQ96MY7 647 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 C7orf25Q9BPX7 421 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 DBNDD2Q9BQY9 259 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 SEC31AO94979 1220 aaKnown RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 PCCAP05165 728 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 CUL1Q13616 776 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 SUCLG2Q96I99 432 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 CFAP99D6REC4 459 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 ZSCAN9O15535 394 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 PLS3P13797 630 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 ORC2Q13416 577 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 TAF12Q16514 161 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 KRT24Q2M2I5 525 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 EURLQ9NYK6 297 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 RPH3AQ9Y2J0 694 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 HMOX2P30519 316 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 AGGF1Q8N302 714 aaeCLIP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 GMNCA6NCL1 334 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 TRIQKQ629K1 86 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 ZNF285Q96NJ3 590 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 HSPA6P17066 643 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 YWHAGP61981 247 aaKnown RBP eCLIP9.85□□□□□ -0.83
COL12A1-211ENST00000615798 IYDQ6PHW0 289 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 MAGEB6Q8N7X4 407 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 TCEANC2Q96MN5 208 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 SCN3BQ9NY72 215 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 COPG2Q9UBF2 871 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 CPP00450 1065 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 TGFBR2P37173 567 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 RASSF7Q02833 373 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 RASGRF1Q13972 1273 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 CASP8Q14790 479 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 KMT5BQ4FZB7 885 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 FAM227BQ96M60 508 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 SMYD2Q9NRG4 433 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 ADA2Q9NZK5 511 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 SAC3D1A6NKF1 404 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 IFNB1P01574 187 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 COG2Q14746 738 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 ZMYM1Q5SVZ6 1142 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 CHCHD4Q8N4Q1 142 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 POTEIP0CG38 1075 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 PIK3CAP42336 1068 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 COX10Q12887 443 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 RUBCNQ92622 972 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 DMAP1Q9NPF5 467 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-211ENST00000615798 USE1Q9NZ43 259 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 PTPN22Q9Y2R2 807 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 OVOS2A0A0G2JMS6 1433 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 PEX1O43933 1283 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 ITGA6P23229 1130 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 OR8H2Q8N162 312 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 FTOQ9C0B1 505 aaKnown RBP eCLIP9.85□□□□□ -0.83
COL12A1-211ENST00000615798 PPP2R2CQ9Y2T4 447 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 VWDEQ8N2E2 1590 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 TTC38Q5R3I4 469 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 S100PBPQ96BU1 408 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 CCDC85AQ96PX6 553 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-211ENST00000615798 ELAC2Q9BQ52 826 aaKnown RBP9.85□□□□□ -0.83
COL12A1-211ENST00000615798 CENPXA8MT69 81 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 ADARP55265 1226 aaKnown RBP9.85□□□□□ -0.83
COL12A1-211ENST00000615798 VCPKMTQ9H867 229 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 HACD3Q9P035 362 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 TAF5LO75529 589 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 METTL14Q9HCE5 456 aaKnown RBP9.85□□□□□ -0.83
COL12A1-211ENST00000615798 SPTLC3Q9NUV7 552 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 FAM45AQ8TCE6 357 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 SLC10A4Q96EP9 437 aa9.85□□□□□ -0.83
COL12A1-211ENST00000615798 RABL2AQ9UBK7 228 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-211ENST00000615798 PSTPIP1O43586 416 aa9.84□□□□□ -0.83
COL12A1-211ENST00000615798 CLCN6P51797 869 aa9.84□□□□□ -0.83
COL12A1-211ENST00000615798 TCP11X2Q5H9J9 407 aa9.84□□□□□ -0.83
COL12A1-211ENST00000615798 ARMC4Q5T2S8 1044 aa9.84□□□□□ -0.83
COL12A1-211ENST00000615798 EHD1Q9H4M9 534 aa9.84□□□□□ -0.83
COL12A1-211ENST00000615798 SAT1P21673 171 aa9.84□□□□□ -0.83
COL12A1-211ENST00000615798 POLR2FP61218 127 aaKnown RBP9.84□□□□□ -0.83
COL12A1-211ENST00000615798 EMBQ6PCB8 327 aa9.84□□□□□ -0.83
COL12A1-211ENST00000615798 SLC17A8Q8NDX2 589 aa9.84□□□□□ -0.83
COL12A1-211ENST00000615798 CAPSLQ8WWF8 208 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms