RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 CLIC4Q9Y696 253 aa28.16■■■□□ 2.1
SURF1-205ENST00000615505 C9IYK1 514 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 DGKIO75912 1065 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 FOSL2P15408 326 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 PHKA2P46019 1235 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 ZRSR1Q15695 479 aaKnown RBP28.15■■■□□ 2.1
SURF1-205ENST00000615505 FAM173BQ6P4H8 233 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 MAEAQ7L5Y9 396 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 CATSPER4Q7RTX7 472 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 CRIPAKQ8N1N5 446 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 KCTD17Q8N5Z5 321 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 ARNTL2Q8WYA1 636 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 CDK5RAP3Q96JB5 506 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 NT5C3AQ9H0P0 336 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 POLR3FQ9H1D9 316 aaPredicted RBP28.15■■■□□ 2.1
SURF1-205ENST00000615505 DACT1Q9NYF0 836 aa28.15■■■□□ 2.1
SURF1-205ENST00000615505 CYP11B2P19099 503 aa28.14■■■□□ 2.1
SURF1-205ENST00000615505 IBSPP21815 317 aaPredicted RBP28.14■■■□□ 2.1
SURF1-205ENST00000615505 LONP1P36776 959 aaKnown RBP28.14■■■□□ 2.1
SURF1-205ENST00000615505 FAM189BP81408 668 aa28.14■■■□□ 2.1
SURF1-205ENST00000615505 POU5F1BQ06416 359 aa28.14■■■□□ 2.1
SURF1-205ENST00000615505 EYA4O95677 639 aa28.13■■■□□ 2.09
SURF1-205ENST00000615505 ERVK-21P61565 698 aa28.13■■■□□ 2.09
SURF1-205ENST00000615505 FAM102BQ5T8I3 360 aa28.13■■■□□ 2.09
SURF1-205ENST00000615505 FIBCD1Q8N539 461 aa28.13■■■□□ 2.09
SURF1-205ENST00000615505 ASAP3Q8TDY4 903 aa28.13■■■□□ 2.09
SURF1-205ENST00000615505 ZNF689Q96CS4 500 aaPredicted RBP28.13■■■□□ 2.09
SURF1-205ENST00000615505 ELAC1Q9H777 363 aaKnown RBP28.13■■■□□ 2.09
SURF1-205ENST00000615505 E9PMD0 336 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 SLC26A4O43511 780 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 GLRA2P23416 452 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 UBA7P41226 1012 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 PTENP60484 403 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 PTPAQ15257 358 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 PCBP1Q15365 356 aaKnown RBP eCLIP28.12■■■□□ 2.09
SURF1-205ENST00000615505 HYIQ5T013 277 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 CABP7Q86V35 215 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 SAMD11Q96NU1 681 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 GPRC5CQ9NQ84 441 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 TMEM161AQ9NX61 479 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 ADGRA3Q8IWK6 1321 aa28.12■■■□□ 2.09
SURF1-205ENST00000615505 MYO9BQ13459 2157 aa28.11■■■□□ 2.09
SURF1-205ENST00000615505 CEBPZQ03701 1054 aaKnown RBP28.11■■■□□ 2.09
SURF1-205ENST00000615505 CAPSQ13938 189 aa28.11■■■□□ 2.09
SURF1-205ENST00000615505 BTG3Q14201 252 aaPredicted RBP28.11■■■□□ 2.09
SURF1-205ENST00000615505 CALML4Q96GE6 196 aa28.11■■■□□ 2.09
SURF1-205ENST00000615505 RC3H2Q9HBD1 1191 aaKnown RBP28.11■■■□□ 2.09
SURF1-205ENST00000615505 MTUS1Q9ULD2 1270 aa28.11■■■□□ 2.09
SURF1-205ENST00000615505 PIN4Q9Y237 131 aaKnown RBP28.11■■■□□ 2.09
SURF1-205ENST00000615505 CHD9Q3L8U1 2897 aa28.11■■■□□ 2.09
SURF1-205ENST00000615505 ZSCAN22P10073 491 aaPredicted RBP28.1■■■□□ 2.09
SURF1-205ENST00000615505 TWF2Q6IBS0 349 aaKnown RBP28.1■■■□□ 2.09
SURF1-205ENST00000615505 SPRED2Q7Z698 418 aa28.1■■■□□ 2.09
SURF1-205ENST00000615505 IFNLR1Q8IU57 520 aaPredicted RBP28.1■■■□□ 2.09
SURF1-205ENST00000615505 ZNF396Q96N95 335 aaPredicted RBP28.1■■■□□ 2.09
SURF1-205ENST00000615505 USP28Q96RU2 1077 aa28.1■■■□□ 2.09
SURF1-205ENST00000615505 NFKBIZQ9BYH8 718 aa28.1■■■□□ 2.09
SURF1-205ENST00000615505 MINDY3Q9H8M7 445 aa28.1■■■□□ 2.09
SURF1-205ENST00000615505 COL4A6Q14031 1691 aa28.1■■■□□ 2.09
SURF1-205ENST00000615505 A0A0U1RQF3 1178 aa28.09■■■□□ 2.09
SURF1-205ENST00000615505 ERLIN2O94905 339 aa28.09■■■□□ 2.09
SURF1-205ENST00000615505 IGFBP4P22692 258 aa28.09■■■□□ 2.09
SURF1-205ENST00000615505 MARCKSP29966 332 aaPredicted RBP28.09■■■□□ 2.09
SURF1-205ENST00000615505 NCBP1Q09161 790 aaKnown RBP28.09■■■□□ 2.09
SURF1-205ENST00000615505 GRB10Q13322 594 aa28.09■■■□□ 2.09
SURF1-205ENST00000615505 ECHDC2Q86YB7 292 aa28.09■■■□□ 2.09
SURF1-205ENST00000615505 CMTR2Q8IYT2 770 aaKnown RBP28.09■■■□□ 2.09
SURF1-205ENST00000615505 PNMA5Q96PV4 448 aa28.09■■■□□ 2.09
SURF1-205ENST00000615505 PLIN2Q99541 437 aa28.09■■■□□ 2.09
SURF1-205ENST00000615505 C17orf80Q9BSJ5 609 aa28.09■■■□□ 2.09
SURF1-205ENST00000615505 AGPAT5Q9NUQ2 364 aa28.09■■■□□ 2.09
SURF1-205ENST00000615505 LRRIQ4A6NIV6 560 aa28.08■■■□□ 2.09
SURF1-205ENST00000615505 INO80B-WBP1J3KQ70 363 aa28.08■■■□□ 2.09
SURF1-205ENST00000615505 RFXAPO00287 272 aa28.08■■■□□ 2.09
SURF1-205ENST00000615505 HOXA2O43364 376 aa28.08■■■□□ 2.09
SURF1-205ENST00000615505 GRIN1Q05586 938 aa28.08■■■□□ 2.09
SURF1-205ENST00000615505 BECN1Q14457 450 aa28.08■■■□□ 2.09
SURF1-205ENST00000615505 FOXD4L5Q5VV16 416 aaPredicted RBP28.08■■■□□ 2.09
SURF1-205ENST00000615505 KCNK18Q7Z418 384 aa28.08■■■□□ 2.09
SURF1-205ENST00000615505 FOXD4L4Q8WXT5 416 aaPredicted RBP28.08■■■□□ 2.09
SURF1-205ENST00000615505 KIFAP3Q92845 792 aa28.08■■■□□ 2.09
SURF1-205ENST00000615505 TRAIPQ9BWF2 469 aa28.08■■■□□ 2.09
SURF1-205ENST00000615505 RWDD3Q9Y3V2 267 aa28.08■■■□□ 2.09
SURF1-205ENST00000615505 SRPRBQ9Y5M8 271 aaKnown RBP28.08■■■□□ 2.09
SURF1-205ENST00000615505 EPOPA6NHQ4 379 aa28.07■■■□□ 2.08
SURF1-205ENST00000615505 EOMESO95936 686 aa28.07■■■□□ 2.08
SURF1-205ENST00000615505 SKIP12755 728 aa28.07■■■□□ 2.08
SURF1-205ENST00000615505 ADGRE1Q14246 886 aa28.07■■■□□ 2.08
SURF1-205ENST00000615505 SLC39A14Q15043 492 aa28.07■■■□□ 2.08
SURF1-205ENST00000615505 PPP2R5AQ15172 486 aa28.07■■■□□ 2.08
SURF1-205ENST00000615505 TMEM119Q4V9L6 283 aa28.07■■■□□ 2.08
SURF1-205ENST00000615505 FBXO22Q8NEZ5 403 aa28.07■■■□□ 2.08
SURF1-205ENST00000615505 RASSF8Q8NHQ8 419 aa28.07■■■□□ 2.08
SURF1-205ENST00000615505 IFT74Q96LB3 600 aa28.07■■■□□ 2.08
SURF1-205ENST00000615505 MORC2Q9Y6X9 1032 aaPredicted RBP28.07■■■□□ 2.08
SURF1-205ENST00000615505 F13A1P00488 732 aa28.06■■■□□ 2.08
SURF1-205ENST00000615505 RAB27AP51159 221 aa28.06■■■□□ 2.08
SURF1-205ENST00000615505 PAN2Q504Q3 1202 aaKnown RBP28.06■■■□□ 2.08
SURF1-205ENST00000615505 EPC2Q52LR7 807 aa28.06■■■□□ 2.08
SURF1-205ENST00000615505 ZBTB8OSQ8IWT0 167 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms