RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 IL23AQ9NPF7 189 aa8.9□□□□□ -0.98
PCDH9-205ENST00000614931 NRBP2Q9NSY0 501 aa8.9□□□□□ -0.98
PCDH9-205ENST00000614931 TRMT13Q9NUP7 481 aaKnown RBP8.9□□□□□ -0.98
PCDH9-205ENST00000614931 EXOC1Q9NV70 894 aa8.9□□□□□ -0.98
PCDH9-205ENST00000614931 TBC1D7Q9P0N9 293 aa8.9□□□□□ -0.98
PCDH9-205ENST00000614931 ZNF215Q9UL58 517 aaPredicted RBP8.9□□□□□ -0.98
PCDH9-205ENST00000614931 STXBP5LQ9Y2K9 1186 aa8.9□□□□□ -0.98
PCDH9-205ENST00000614931 COL1A2P08123 1366 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 ADGRA3Q8IWK6 1321 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-205ENST00000614931 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-205ENST00000614931 PPP1R3GB7ZBB8 358 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 MAFO75444 373 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-205ENST00000614931 DGAT1O75907 488 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 FAM13AO94988 1023 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 KRT18P05783 430 aaKnown RBP8.89□□□□□ -0.99
PCDH9-205ENST00000614931 CCDC192P0DO97 292 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 MYBP10242 640 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 ACRP10323 421 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 NMT1P30419 496 aaKnown RBP8.89□□□□□ -0.99
PCDH9-205ENST00000614931 HOXC8P31273 242 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 PRCPP42785 496 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 CHMP4BP1P59074 171 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 IGBP1P78318 339 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 ZNF200P98182 395 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-205ENST00000614931 PPFIA1Q13136 1202 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 GRIK4Q16099 956 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 FAM26FQ5R3K3 315 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 ZNF697Q5TEC3 545 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 ZNF658Q5TYW1 1059 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-205ENST00000614931 SASS6Q6UVJ0 657 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 ZNF365Q70YC5 407 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 SESTD1Q86VW0 696 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 CCDC65Q8IXS2 484 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 TRIML1Q8N9V2 468 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 LMBR1Q8WVP7 490 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 TMEM143Q96AN5 459 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 CCDC34Q96HJ3 373 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 GUCD1Q96NT3 240 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 LRRC27Q9C0I9 530 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 POLR3FQ9H1D9 316 aaPredicted RBP8.89□□□□□ -0.99
PCDH9-205ENST00000614931 WNT8AQ9H1J5 351 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 RBSNQ9H1K0 784 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 SEMA6BQ9H3T3 888 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 ZHX3Q9H4I2 956 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 KCND2Q9NZV8 630 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 ODF2LQ9ULJ1 636 aa8.89□□□□□ -0.99
PCDH9-205ENST00000614931 ZMYM2Q9UBW7 1377 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 TBCAO75347 108 aaKnown RBP8.88□□□□□ -0.99
PCDH9-205ENST00000614931 FGBP02675 491 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 CYP2C9P11712 490 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 GAP43P17677 238 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 GLRA2P23416 452 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 HOXD13P35453 343 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 ARL2P36404 184 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 RFC5P40937 340 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 CLCN3P51790 818 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 POLGP54098 1239 aaPredicted RBP8.88□□□□□ -0.99
PCDH9-205ENST00000614931 PMS1P54277 932 aaKnown RBP8.88□□□□□ -0.99
PCDH9-205ENST00000614931 CCL23P55773 120 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 ADAM17P78536 824 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 TBC1D8BQ0IIM8 1120 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 HERC4Q5GLZ8 1057 aaPredicted RBP8.88□□□□□ -0.99
PCDH9-205ENST00000614931 FAM47CQ5HY64 1035 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 ZNF484Q5JVG2 852 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 FAM102BQ5T8I3 360 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 PSRC1Q6PGN9 363 aaPredicted RBP8.88□□□□□ -0.99
PCDH9-205ENST00000614931 MTHFD1LQ6UB35 978 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 RUFY4Q6ZNE9 571 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 EPM2AIP1Q7L775 607 aaPredicted RBP8.88□□□□□ -0.99
PCDH9-205ENST00000614931 KSR1Q8IVT5 923 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 ADSSL1Q8N142 457 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 MYCT1Q8N699 235 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 MCPH1Q8NEM0 835 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 HERVK_113Q902F9 699 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 VWCEQ96DN2 955 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 KIFC3Q9BVG8 833 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 STRA6Q9BX79 667 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 IKZF4Q9H2S9 585 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 TTYH1Q9H313 450 aaPredicted RBP8.88□□□□□ -0.99
PCDH9-205ENST00000614931 PARVGQ9HBI0 331 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 CBX8Q9HC52 389 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 SETD4Q9NVD3 440 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 ANO10Q9NW15 660 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 HDAC6Q9UBN7 1215 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 CTNND2Q9UQB3 1225 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 MAPK8IP1Q9UQF2 711 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 COL4A3BPQ9Y5P4 624 aa8.88□□□□□ -0.99
PCDH9-205ENST00000614931 ANK1P16157 1881 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 TMEM265A0A087WTH1 108 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 MBLAC1A4D2B0 266 aaPredicted RBP8.87□□□□□ -0.99
PCDH9-205ENST00000614931 TRIM49BA6NDI0 452 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 PITPNM1O00562 1244 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 SLC16A4O15374 487 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 PPP1R37O75864 691 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 PRPF6O94906 941 aaKnown RBP8.87□□□□□ -0.99
PCDH9-205ENST00000614931 PLS3P13797 630 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 KLRC1P26715 233 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 NCKAP1LP55160 1127 aa8.87□□□□□ -0.99
PCDH9-205ENST00000614931 PEX3P56589 373 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms