RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	CRKL	P46109	303 aa	Known RBP	12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	SCARA5	Q6ZMJ2	495 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	UCMA	Q8WVF2	138 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	H2AFY2	Q9P0M6	372 aa	Predicted RBP	12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	AFF4	Q9UHB7	1163 aa	Known RBP	12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	GOLGA4	Q13439	2230 aa	Known RBP	12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	ORC4	O43929	436 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	CYP27A1	Q02318	531 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	OCA2	Q04671	838 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	USP6NL	Q92738	828 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	DHTKD1	Q96HY7	919 aa	Predicted RBP	12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	POLE3	Q9NRF9	147 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	INTS9	Q9NV88	658 aa	Known RBP	12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	SERTAD1	Q9UHV2	236 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	HNRNPR	O43390	633 aa	Known RBP	12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	PYGM	P11217	842 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	GDA	Q9Y2T3	454 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	ERBB4	Q15303	1308 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	VAMP4	O75379	141 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	SUPT3H	O75486	399 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	KRT16	P08779	473 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	HDAC4	P56524	1084 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	EXD1	Q8NHP7	514 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	KLHDC4	Q8TBB5	520 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	DCAF4	Q8WV16	495 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	NEURL1B	A8MQ27	555 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	LRRN2	O75325	713 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	ATP5J	P18859	108 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	NPY2R	P49146	381 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	TMEM179	Q6ZVK1	233 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	ADCK2	Q7Z695	626 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	FAM32A	Q9Y421	112 aa	Known RBP	12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	PSMD3	O43242	534 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	CENPA	P49450	140 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	MTMR1	Q13613	665 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	ARMC2	Q8NEN0	867 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	BCAS4	Q8TDM0	211 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293		A0A1W2PP64	1363 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	CFLAR	O15519	480 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	HIST1H2AD	P20671	130 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	DDIT3	P35638	169 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	KRT78	Q8N1N4	520 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	HIST1H2AH	Q96KK5	128 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	HIST1H2AJ	Q99878	128 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	H2AFJ	Q9BTM1	129 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	UNC45A	Q9H3U1	944 aa		12.97	□□□□□ -0.33
ABCA2-223	ENST00000614293	TET3	O43151	1660 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	FDX1	P10109	184 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	PNOC	Q13519	176 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	EFHC2	Q5JST6	749 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	ZNF556	Q9HAH1	456 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	LAMC1	P11047	1609 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	MAP3K19	Q56UN5	1328 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	ACADM	P11310	421 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	PDIA3	P30101	505 aa	Known RBP	12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	MXI1	P50539	228 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	MRPL4	Q9BYD3	311 aa	Known RBP	12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	RUBCNL	Q9H714	662 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	AIPL1	Q9NZN9	384 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	TNKS	O95271	1327 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	LONRF3	Q496Y0	759 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	TTC17	Q96AE7	1141 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	DPH5	Q9H2P9	285 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	UBN2	Q6ZU65	1347 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	IL6ST	P40189	918 aa	Predicted RBP	12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	HSD17B4	P51659	736 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.96	□□□□□ -0.33	8e-7	■■■■■ 30.6
ABCA2-223	ENST00000614293	SLC27A3	Q5K4L6	730 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	IER5	Q5VY09	327 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	USPL1	Q5W0Q7	1092 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	CNOT6L	Q96LI5	555 aa	Known RBP	12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	FOXP3	Q9BZS1	431 aa		12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	NGRN	Q9NPE2	291 aa	Known RBP	12.96	□□□□□ -0.33
ABCA2-223	ENST00000614293	USP17L5	A8MUK1	530 aa		12.96	□□□□□ -0.34
ABCA2-223	ENST00000614293	CENPP	Q6IPU0	288 aa		12.96	□□□□□ -0.34
ABCA2-223	ENST00000614293	OR6J1	Q8NGC5	347 aa		12.96	□□□□□ -0.34
ABCA2-223	ENST00000614293	WRNIP1	Q96S55	665 aa		12.96	□□□□□ -0.34
ABCA2-223	ENST00000614293	TSC22D3	Q99576	134 aa		12.96	□□□□□ -0.34
ABCA2-223	ENST00000614293	EXOC1L	A0A1B0GW35	172 aa		12.96	□□□□□ -0.34
ABCA2-223	ENST00000614293	FBXO18	Q8NFZ0	1043 aa		12.96	□□□□□ -0.34
ABCA2-223	ENST00000614293	NDE1	Q9NXR1	346 aa		12.96	□□□□□ -0.34
ABCA2-223	ENST00000614293	KRT37	O76014	449 aa		12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	PLS3	P13797	630 aa		12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	MIGA2	Q7L4E1	593 aa		12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	PIP4K2C	Q8TBX8	421 aa		12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	RMDN1	Q96DB5	314 aa		12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	PLEKHA4	Q9H4M7	779 aa		12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	AKT1	P31749	480 aa		12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	ADK	P55263	362 aa	Known RBP	12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	ANO4	Q32M45	955 aa		12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	MRPL48	Q96GC5	212 aa	Known RBP	12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	ZHX2	Q9Y6X8	837 aa		12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	PIK3R2	O00459	728 aa		12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	LRG1	P02750	347 aa		12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	PCCA	P05165	728 aa	Predicted RBP	12.95	□□□□□ -0.34
ABCA2-223	ENST00000614293	RARB	P10826	455 aa		12.95	□□□□□ -0.34

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