RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 NEMFO60524 1076 aa25.42■■□□□ 1.66
FAM228B-208ENST00000613899 CSDE1O75534 798 aaKnown RBP25.42■■□□□ 1.66
FAM228B-208ENST00000613899 EOMESO95936 686 aa25.42■■□□□ 1.66
FAM228B-208ENST00000613899 DNAJB1P25685 340 aa25.42■■□□□ 1.66
FAM228B-208ENST00000613899 THNSL1Q8IYQ7 743 aa25.42■■□□□ 1.66
FAM228B-208ENST00000613899 DYDC2Q96IM9 177 aa25.42■■□□□ 1.66
FAM228B-208ENST00000613899 CASD1Q96PB1 797 aa25.42■■□□□ 1.66
FAM228B-208ENST00000613899 LLPHQ9BRT6 129 aaKnown RBP25.42■■□□□ 1.66
FAM228B-208ENST00000613899 DHX33Q9H6R0 707 aaKnown RBP25.42■■□□□ 1.66
FAM228B-208ENST00000613899 RGL1Q9NZL6 768 aa25.42■■□□□ 1.66
FAM228B-208ENST00000613899 PCDHA12Q9UN75 941 aa25.42■■□□□ 1.66
FAM228B-208ENST00000613899 COL4A3BPQ9Y5P4 624 aa25.42■■□□□ 1.66
FAM228B-208ENST00000613899 GRXCR2A6NFK2 248 aa25.41■■□□□ 1.66
FAM228B-208ENST00000613899 IL9P15248 144 aa25.41■■□□□ 1.66
FAM228B-208ENST00000613899 CYP4A11Q02928 519 aa25.41■■□□□ 1.66
FAM228B-208ENST00000613899 CCDC83Q8IWF9 413 aa25.41■■□□□ 1.66
FAM228B-208ENST00000613899 RNF169Q8NCN4 708 aa25.41■■□□□ 1.66
FAM228B-208ENST00000613899 PSPC1Q8WXF1 523 aaKnown RBP25.41■■□□□ 1.66
FAM228B-208ENST00000613899 CWH43Q9H720 699 aa25.41■■□□□ 1.66
FAM228B-208ENST00000613899 RNF19AQ9NV58 838 aa25.41■■□□□ 1.66
FAM228B-208ENST00000613899 HCSTQ9UBK5 93 aa25.41■■□□□ 1.66
FAM228B-208ENST00000613899 FGF18O76093 207 aa25.4■■□□□ 1.66
FAM228B-208ENST00000613899 CTTNQ14247 550 aaKnown RBP25.4■■□□□ 1.66
FAM228B-208ENST00000613899 C8orf34Q49A92 452 aa25.4■■□□□ 1.66
FAM228B-208ENST00000613899 ZNF598Q86UK7 904 aaKnown RBP25.4■■□□□ 1.66
FAM228B-208ENST00000613899 FAM178BQ8IXR5 827 aa25.4■■□□□ 1.66
FAM228B-208ENST00000613899 TCP11Q8WWU5 503 aa25.4■■□□□ 1.66
FAM228B-208ENST00000613899 RSPH1Q8WYR4 309 aa25.4■■□□□ 1.66
FAM228B-208ENST00000613899 ZSCAN31Q96LW9 406 aaPredicted RBP25.4■■□□□ 1.66
FAM228B-208ENST00000613899 TRAIPQ9BWF2 469 aa25.4■■□□□ 1.66
FAM228B-208ENST00000613899 IGFLR1Q9H665 355 aa25.4■■□□□ 1.66
FAM228B-208ENST00000613899 TTC12Q9H892 705 aaPredicted RBP25.4■■□□□ 1.66
FAM228B-208ENST00000613899 TLR9Q9NR96 1032 aa25.4■■□□□ 1.66
FAM228B-208ENST00000613899 PIN4Q9Y237 131 aaKnown RBP25.4■■□□□ 1.66
FAM228B-208ENST00000613899 SKIP12755 728 aa25.39■■□□□ 1.66
FAM228B-208ENST00000613899 IRS1P35568 1242 aa25.39■■□□□ 1.66
FAM228B-208ENST00000613899 PPM1AP35813 382 aa25.39■■□□□ 1.66
FAM228B-208ENST00000613899 LTBRP36941 435 aa25.39■■□□□ 1.66
FAM228B-208ENST00000613899 EMC2Q15006 297 aa25.39■■□□□ 1.66
FAM228B-208ENST00000613899 XKR9Q5GH70 373 aa25.39■■□□□ 1.66
FAM228B-208ENST00000613899 TWF2Q6IBS0 349 aaKnown RBP25.39■■□□□ 1.66
FAM228B-208ENST00000613899 CATSPER4Q7RTX7 472 aa25.39■■□□□ 1.66
FAM228B-208ENST00000613899 KSR1Q8IVT5 923 aa25.39■■□□□ 1.66
FAM228B-208ENST00000613899 TPH2Q8IWU9 490 aa25.39■■□□□ 1.66
FAM228B-208ENST00000613899 ZNF579Q8NAF0 562 aaKnown RBP25.39■■□□□ 1.66
FAM228B-208ENST00000613899 C8orf76Q96K31 380 aa25.39■■□□□ 1.66
FAM228B-208ENST00000613899 EIF2AK1Q9BQI3 630 aaKnown RBP25.39■■□□□ 1.66
FAM228B-208ENST00000613899 MRPL9Q9BYD2 267 aaKnown RBP25.39■■□□□ 1.66
FAM228B-208ENST00000613899 SH2B1Q9NRF2 756 aaPredicted RBP25.39■■□□□ 1.66
FAM228B-208ENST00000613899 ATF7P17544 494 aaPredicted RBP25.38■■□□□ 1.65
FAM228B-208ENST00000613899 RAB27AP51159 221 aa25.38■■□□□ 1.65
FAM228B-208ENST00000613899 HMGN5P82970 282 aaKnown RBP25.38■■□□□ 1.65
FAM228B-208ENST00000613899 CLLU1OSQ5K130 101 aa25.38■■□□□ 1.65
FAM228B-208ENST00000613899 PDE12Q6L8Q7 609 aaKnown RBP25.38■■□□□ 1.65
FAM228B-208ENST00000613899 IFT122Q9HBG6 1241 aa25.38■■□□□ 1.65
FAM228B-208ENST00000613899 LZTS1Q9Y250 596 aa25.38■■□□□ 1.65
FAM228B-208ENST00000613899 FSD2A1L4K1 749 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 WNT7AO00755 349 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 SLITRK3O94933 977 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 LYPLA2O95372 231 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 GTF2F1P35269 517 aaKnown RBP eCLIP25.37■■□□□ 1.655e-6■■■■□ 24.4
FAM228B-208ENST00000613899 TXKP42681 527 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 PHKA2P46019 1235 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 GUCY1B3Q02153 619 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 LRRC55Q6ZSA7 311 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 SRGAP1Q7Z6B7 1085 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 ADGRD2Q7Z7M1 963 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 HELQQ8TDG4 1101 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 MICAL1Q8TDZ2 1067 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 PRPF31Q8WWY3 499 aaKnown RBP25.37■■□□□ 1.65
FAM228B-208ENST00000613899 TMEM143Q96AN5 459 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 ZNF558Q96NG5 402 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 MTMR9Q96QG7 549 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 MTRQ99707 1265 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 C1QTNF1Q9BXJ1 281 aa25.37■■□□□ 1.65
FAM228B-208ENST00000613899 BMP2KQ9NSY1 1161 aaPredicted RBP25.37■■□□□ 1.65
FAM228B-208ENST00000613899 ASAP2O43150 1006 aa25.36■■□□□ 1.65
FAM228B-208ENST00000613899 TBX10O75333 385 aa25.36■■□□□ 1.65
FAM228B-208ENST00000613899 NDUFV1P49821 464 aa25.36■■□□□ 1.65
FAM228B-208ENST00000613899 PLCB3Q01970 1234 aa25.36■■□□□ 1.65
FAM228B-208ENST00000613899 ADAM15Q13444 863 aa25.36■■□□□ 1.65
FAM228B-208ENST00000613899 KCNT2Q6UVM3 1135 aa25.36■■□□□ 1.65
FAM228B-208ENST00000613899 EFHBQ8N7U6 833 aa25.36■■□□□ 1.65
FAM228B-208ENST00000613899 CCDC43Q96MW1 224 aaKnown RBP25.36■■□□□ 1.65
FAM228B-208ENST00000613899 HSD17B14Q9BPX1 270 aa25.36■■□□□ 1.65
FAM228B-208ENST00000613899 AGPAT5Q9NUQ2 364 aa25.36■■□□□ 1.65
FAM228B-208ENST00000613899 PUF60Q9UHX1 559 aaKnown RBP25.36■■□□□ 1.65
FAM228B-208ENST00000613899 LINC01565O15544 149 aa25.35■■□□□ 1.65
FAM228B-208ENST00000613899 NRIP1P48552 1158 aa25.35■■□□□ 1.65
FAM228B-208ENST00000613899 DLX2Q07687 328 aaPredicted RBP25.35■■□□□ 1.65
FAM228B-208ENST00000613899 LAMTOR4Q0VGL1 99 aa25.35■■□□□ 1.65
FAM228B-208ENST00000613899 GJD3Q8N144 294 aa25.35■■□□□ 1.65
FAM228B-208ENST00000613899 MRPS27Q92552 414 aaKnown RBP25.35■■□□□ 1.65
FAM228B-208ENST00000613899 KIF2CQ99661 725 aa25.35■■□□□ 1.65
FAM228B-208ENST00000613899 FOXP1Q9H334 677 aaPredicted RBP25.35■■□□□ 1.65
FAM228B-208ENST00000613899 ANKEF1Q9NU02 776 aa25.35■■□□□ 1.65
FAM228B-208ENST00000613899 FAM105AQ9NUU6 356 aa25.35■■□□□ 1.65
FAM228B-208ENST00000613899 PRKAG3Q9UGI9 489 aa25.35■■□□□ 1.65
FAM228B-208ENST00000613899 SRGAP2CP0DJJ0 459 aa25.34■■□□□ 1.65
FAM228B-208ENST00000613899 SSTR3P32745 418 aaPredicted RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms