RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 HSPA1AP0DMV8 641 aaKnown RBP15.17■□□□□ 0.02
TMEM254-213ENST00000613758 HSPA1BP0DMV9 641 aaKnown RBP15.17■□□□□ 0.02
TMEM254-213ENST00000613758 GLRA2P23416 452 aa15.17■□□□□ 0.02
TMEM254-213ENST00000613758 CTCFP49711 727 aaPredicted RBP15.17■□□□□ 0.02
TMEM254-213ENST00000613758 DNM2P50570 870 aa15.17■□□□□ 0.02
TMEM254-213ENST00000613758 BMT2Q1RMZ1 405 aa15.17■□□□□ 0.02
TMEM254-213ENST00000613758 HAUS6Q7Z4H7 955 aa15.17■□□□□ 0.02
TMEM254-213ENST00000613758 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.17■□□□□ 0.02
TMEM254-213ENST00000613758 SLC17A8Q8NDX2 589 aa15.17■□□□□ 0.02
TMEM254-213ENST00000613758 PRPF31Q8WWY3 499 aaKnown RBP15.17■□□□□ 0.02
TMEM254-213ENST00000613758 MRFAP1L1Q96HT8 127 aa15.17■□□□□ 0.02
TMEM254-213ENST00000613758 STRA6Q9BX79 667 aa15.17■□□□□ 0.02
TMEM254-213ENST00000613758 UNC93B1Q9H1C4 597 aa15.17■□□□□ 0.02
TMEM254-213ENST00000613758 FANCLQ9NW38 375 aa15.17■□□□□ 0.02
TMEM254-213ENST00000613758 SUCLA2Q9P2R7 463 aaPredicted RBP15.17■□□□□ 0.02
TMEM254-213ENST00000613758 NFE2L3Q9Y4A8 694 aa15.17■□□□□ 0.02
TMEM254-213ENST00000613758 MYH11P35749 1972 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 ATP1A3P13637 1013 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 CDC25BP30305 580 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 HOXD13P35453 343 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 CLCN3P51790 818 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 TPM4P67936 248 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 ALCAMQ13740 583 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 PPP2R5AQ15172 486 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 TPD52L1Q16890 204 aaPredicted RBP15.16■□□□□ 0.02
TMEM254-213ENST00000613758 KNOP1Q1ED39 458 aaKnown RBP15.16■□□□□ 0.02
TMEM254-213ENST00000613758 TTI2Q6NXR4 508 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 KSR1Q8IVT5 923 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 LMBR1Q8WVP7 490 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 PSPC1Q8WXF1 523 aaKnown RBP15.16■□□□□ 0.02
TMEM254-213ENST00000613758 ST6GALNAC4Q9H4F1 302 aa15.16■□□□□ 0.02
TMEM254-213ENST00000613758 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.16■□□□□ 0.02
TMEM254-213ENST00000613758 PPP1R37O75864 691 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 NAMPTP43490 491 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 KCNA1Q09470 495 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 MXD4Q14582 209 aaPredicted RBP15.15■□□□□ 0.02
TMEM254-213ENST00000613758 C7orf31Q8N865 590 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 SPC24Q8NBT2 197 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 TMEM161BQ8NDZ6 487 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 KIFC3Q9BVG8 833 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 KCTD10Q9H3F6 313 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 HDAC6Q9UBN7 1215 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 MYCP01106 439 aaPredicted RBP15.15■□□□□ 0.02
TMEM254-213ENST00000613758 TMOD1P28289 359 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 GTF2BQ00403 316 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 LAMTOR4Q0VGL1 99 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 NBPF20Q3BBV1 942 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 NFRKBQ6P4R8 1299 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 LINC01465Q8N7H1 131 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 TSG101Q99816 390 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 DUSP9Q99956 384 aaKnown RBP15.15■□□□□ 0.02
TMEM254-213ENST00000613758 SAMSN1Q9NSI8 373 aaKnown RBP15.15■□□□□ 0.02
TMEM254-213ENST00000613758 UBE4BO95155 1302 aa15.15■□□□□ 0.02
TMEM254-213ENST00000613758 C17orf102A2RUQ5 167 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 LRRIQ4A6NIV6 560 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 ASAP2O43150 1006 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 PTMAP06454 111 aaKnown RBP15.14■□□□□ 0.01
TMEM254-213ENST00000613758 ZNF18P17022 549 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 ADAM17P78536 824 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 FANCCQ00597 558 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 CAPSQ13938 189 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 HIC1Q14526 733 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 MTFR1Q15390 333 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 RHPN2Q8IUC4 686 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 ARRDC4Q8NCT1 418 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 DEPTORQ8TB45 409 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 ACCSQ96QU6 501 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 ADGRA3Q8IWK6 1321 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 DENND3A2RUS2 1198 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 MBLAC1A4D2B0 266 aaPredicted RBP15.14■□□□□ 0.01
TMEM254-213ENST00000613758 H0YCG3 227 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 CABYRO75952 493 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 GNAT1P11488 350 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 CCL5P13501 91 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 ACLYP53396 1101 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 LRRC63Q05C16 580 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 ZCWPW2Q504Y3 356 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 FBXO46Q6PJ61 603 aaPredicted RBP15.14■□□□□ 0.01
TMEM254-213ENST00000613758 CSGALNACT2Q8N6G5 542 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 TSEN34Q9BSV6 310 aaKnown RBP15.14■□□□□ 0.01
TMEM254-213ENST00000613758 SRRTQ9BXP5 876 aaKnown RBP15.14■□□□□ 0.01
TMEM254-213ENST00000613758 XPO4Q9C0E2 1151 aaKnown RBP15.14■□□□□ 0.01
TMEM254-213ENST00000613758 IFNKQ9P0W0 207 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 ARHGAP28Q9P2N2 729 aa15.14■□□□□ 0.01
TMEM254-213ENST00000613758 ESPNB1AK53 854 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 PDXKO00764 312 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 GJB1P08034 283 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 SRGAP2CP0DJJ0 459 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 ZNF200P98182 395 aaPredicted RBP15.13■□□□□ 0.01
TMEM254-213ENST00000613758 FOXR2Q6PJQ5 311 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 KIAA0319LQ8IZA0 1049 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 SYCP3Q8IZU3 236 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 HVCN1Q96D96 273 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 RNF208Q9H0X6 261 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 TMEM206Q9H813 350 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 RRAGDQ9NQL2 400 aaPredicted RBP15.13■□□□□ 0.01
TMEM254-213ENST00000613758 PAK6Q9NQU5 681 aaPredicted RBP15.13■□□□□ 0.01
TMEM254-213ENST00000613758 TBX20Q9UMR3 447 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 TRAF3IP3Q9Y228 551 aa15.13■□□□□ 0.01
TMEM254-213ENST00000613758 AKT3Q9Y243 479 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms