RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 TMEM150BA6NC51 233 aa26.49■■□□□ 1.83
MMP28-203ENST00000612672 PRR23AA6NEV1 266 aa26.49■■□□□ 1.83
MMP28-203ENST00000612672 CPA1P15085 419 aa26.49■■□□□ 1.83
MMP28-203ENST00000612672 CA8P35219 290 aa26.49■■□□□ 1.83
MMP28-203ENST00000612672 LONRF3Q496Y0 759 aa26.49■■□□□ 1.83
MMP28-203ENST00000612672 CES5AQ6NT32 575 aa26.49■■□□□ 1.83
MMP28-203ENST00000612672 LPPQ93052 612 aa26.49■■□□□ 1.83
MMP28-203ENST00000612672 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.48■■□□□ 1.83
MMP28-203ENST00000612672 CXCL14O95715 111 aa26.48■■□□□ 1.83
MMP28-203ENST00000612672 CIITAP33076 1130 aa26.48■■□□□ 1.83
MMP28-203ENST00000612672 KIAA1841Q6NSI8 718 aa26.48■■□□□ 1.83
MMP28-203ENST00000612672 VPS52Q8N1B4 723 aa26.48■■□□□ 1.83
MMP28-203ENST00000612672 REXO1Q8N1G1 1221 aaKnown RBP26.48■■□□□ 1.83
MMP28-203ENST00000612672 SLC22A17Q8WUG5 538 aa26.48■■□□□ 1.83
MMP28-203ENST00000612672 FAM167AQ96KS9 214 aa26.48■■□□□ 1.83
MMP28-203ENST00000612672 CEP89Q96ST8 783 aa26.48■■□□□ 1.83
MMP28-203ENST00000612672 LIMD1Q9UGP4 676 aa26.48■■□□□ 1.83
MMP28-203ENST00000612672 SAMM50Q9Y512 469 aa26.48■■□□□ 1.83
MMP28-203ENST00000612672 WDR64B1ANS9 1081 aa26.47■■□□□ 1.83
MMP28-203ENST00000612672 MSH4O15457 936 aa26.47■■□□□ 1.83
MMP28-203ENST00000612672 NBL1P41271 181 aa26.47■■□□□ 1.83
MMP28-203ENST00000612672 MTHFRP42898 656 aa26.47■■□□□ 1.83
MMP28-203ENST00000612672 NUBP1P53384 320 aa26.47■■□□□ 1.83
MMP28-203ENST00000612672 TARBP2Q15633 366 aaKnown RBP26.47■■□□□ 1.83
MMP28-203ENST00000612672 CWF19L1Q69YN2 538 aaKnown RBP26.47■■□□□ 1.83
MMP28-203ENST00000612672 SH2D3AQ9BRG2 576 aa26.47■■□□□ 1.83
MMP28-203ENST00000612672 IRF2BPLQ9H1B7 796 aa26.47■■□□□ 1.83
MMP28-203ENST00000612672 DISC1Q9NRI5 854 aa26.47■■□□□ 1.83
MMP28-203ENST00000612672 CHMP2AO43633 222 aa26.46■■□□□ 1.83
MMP28-203ENST00000612672 ZC3H11AO75152 810 aaKnown RBP eCLIP26.46■■□□□ 1.83
MMP28-203ENST00000612672 EOMESO95936 686 aa26.46■■□□□ 1.83
MMP28-203ENST00000612672 ZDHHC14Q8IZN3 488 aa26.46■■□□□ 1.83
MMP28-203ENST00000612672 TDRD5Q8NAT2 981 aaKnown RBP26.46■■□□□ 1.83
MMP28-203ENST00000612672 NLRP7Q8WX94 980 aa26.46■■□□□ 1.83
MMP28-203ENST00000612672 UNC45AQ9H3U1 944 aa26.46■■□□□ 1.83
MMP28-203ENST00000612672 STBD1O95210 358 aa26.45■■□□□ 1.82
MMP28-203ENST00000612672 TMOD1P28289 359 aa26.45■■□□□ 1.82
MMP28-203ENST00000612672 PHKA2P46019 1235 aa26.45■■□□□ 1.82
MMP28-203ENST00000612672 ASTLQ6HA08 431 aaPredicted RBP26.45■■□□□ 1.82
MMP28-203ENST00000612672 TMEM169Q96HH4 297 aa26.45■■□□□ 1.82
MMP28-203ENST00000612672 SCLT1Q96NL6 688 aa26.45■■□□□ 1.82
MMP28-203ENST00000612672 MRPL9Q9BYD2 267 aaKnown RBP26.45■■□□□ 1.82
MMP28-203ENST00000612672 NRDE2Q9H7Z3 1164 aa26.45■■□□□ 1.82
MMP28-203ENST00000612672 DNAJB4Q9UDY4 337 aa26.45■■□□□ 1.82
MMP28-203ENST00000612672 TCEAL9Q9UHQ7 104 aa26.45■■□□□ 1.82
MMP28-203ENST00000612672 NAP1L2Q9ULW6 460 aaPredicted RBP26.45■■□□□ 1.82
MMP28-203ENST00000612672 TSGA10IPQ3SY00 556 aa26.44■■□□□ 1.82
MMP28-203ENST00000612672 TMC5Q6UXY8 1006 aa26.44■■□□□ 1.82
MMP28-203ENST00000612672 FRMD5Q7Z6J6 570 aa26.44■■□□□ 1.82
MMP28-203ENST00000612672 PHKBQ93100 1093 aa26.44■■□□□ 1.82
MMP28-203ENST00000612672 IGSF21Q96ID5 467 aa26.44■■□□□ 1.82
MMP28-203ENST00000612672 C6orf50Q9HD87 102 aa26.44■■□□□ 1.82
MMP28-203ENST00000612672 TBC1D13Q9NVG8 400 aa26.44■■□□□ 1.82
MMP28-203ENST00000612672 IRAK3Q9Y616 596 aa26.44■■□□□ 1.82
MMP28-203ENST00000612672 NID2Q14112 1375 aa26.44■■□□□ 1.82
MMP28-203ENST00000612672 CACNA1AO00555 2505 aa26.43■■□□□ 1.82
MMP28-203ENST00000612672 CTSAP10619 480 aa26.43■■□□□ 1.82
MMP28-203ENST00000612672 ALDH7A1P49419 539 aaKnown RBP26.43■■□□□ 1.82
MMP28-203ENST00000612672 RCAN1P53805 252 aa26.43■■□□□ 1.82
MMP28-203ENST00000612672 RNF20Q5VTR2 975 aa26.43■■□□□ 1.82
MMP28-203ENST00000612672 SLC5A5Q92911 643 aa26.43■■□□□ 1.82
MMP28-203ENST00000612672 NRBP2Q9NSY0 501 aa26.43■■□□□ 1.82
MMP28-203ENST00000612672 DZANK1Q9NVP4 752 aa26.43■■□□□ 1.82
MMP28-203ENST00000612672 DBR1Q9UK59 544 aaKnown RBP26.43■■□□□ 1.82
MMP28-203ENST00000612672 A0A087WZ62 844 aa26.42■■□□□ 1.82
MMP28-203ENST00000612672 PI15O43692 258 aa26.42■■□□□ 1.82
MMP28-203ENST00000612672 GALTP07902 379 aa26.42■■□□□ 1.82
MMP28-203ENST00000612672 TBC1D8BQ0IIM8 1120 aa26.42■■□□□ 1.82
MMP28-203ENST00000612672 DDX53Q86TM3 631 aaKnown RBP26.42■■□□□ 1.82
MMP28-203ENST00000612672 FDXACB1Q9BRP7 624 aaPredicted RBP26.42■■□□□ 1.82
MMP28-203ENST00000612672 IGKV6-21A0A0C4DH24 114 aa26.41■■□□□ 1.82
MMP28-203ENST00000612672 NPR3P17342 541 aa26.41■■□□□ 1.82
MMP28-203ENST00000612672 SLC11A1P49279 550 aa26.41■■□□□ 1.82
MMP28-203ENST00000612672 AFF1P51825 1210 aaKnown RBP26.41■■□□□ 1.82
MMP28-203ENST00000612672 PTPN14Q15678 1187 aa26.41■■□□□ 1.82
MMP28-203ENST00000612672 MTERF2Q49AM1 385 aa26.41■■□□□ 1.82
MMP28-203ENST00000612672 KSR1Q8IVT5 923 aa26.41■■□□□ 1.82
MMP28-203ENST00000612672 CCDC136Q96JN2 1154 aa26.41■■□□□ 1.82
MMP28-203ENST00000612672 DACT1Q9NYF0 836 aa26.41■■□□□ 1.82
MMP28-203ENST00000612672 SEPT9Q9UHD8 586 aaPredicted RBP26.41■■□□□ 1.82
MMP28-203ENST00000612672 USTQ9Y2C2 406 aa26.41■■□□□ 1.82
MMP28-203ENST00000612672 INPP5FQ9Y2H2 1132 aa26.41■■□□□ 1.82
MMP28-203ENST00000612672 PRPF3O43395 683 aaKnown RBP26.4■■□□□ 1.82
MMP28-203ENST00000612672 GAS7O60861 476 aa26.4■■□□□ 1.82
MMP28-203ENST00000612672 NTRK3Q16288 839 aa26.4■■□□□ 1.82
MMP28-203ENST00000612672 ATAT1Q5SQI0 421 aa26.4■■□□□ 1.82
MMP28-203ENST00000612672 ZNF280BQ86YH2 543 aa26.4■■□□□ 1.82
MMP28-203ENST00000612672 ZNF710Q8N1W2 664 aa26.4■■□□□ 1.82
MMP28-203ENST00000612672 TRAIPQ9BWF2 469 aa26.4■■□□□ 1.82
MMP28-203ENST00000612672 VPS54Q9P1Q0 977 aa26.4■■□□□ 1.82
MMP28-203ENST00000612672 DOCK8Q8NF50 2099 aa26.39■■□□□ 1.82
MMP28-203ENST00000612672 OFD1O75665 1012 aa26.39■■□□□ 1.82
MMP28-203ENST00000612672 PSMD10O75832 226 aa26.39■■□□□ 1.82
MMP28-203ENST00000612672 POLGP54098 1239 aaPredicted RBP26.39■■□□□ 1.82
MMP28-203ENST00000612672 NOMO2Q5JPE7 1267 aa26.39■■□□□ 1.82
MMP28-203ENST00000612672 LRCH2Q5VUJ6 765 aa26.39■■□□□ 1.82
MMP28-203ENST00000612672 TWF2Q6IBS0 349 aaKnown RBP26.39■■□□□ 1.82
MMP28-203ENST00000612672 B3GNT9Q6UX72 402 aa26.39■■□□□ 1.82
MMP28-203ENST00000612672 Q6ZUG5 572 aa26.39■■□□□ 1.82
MMP28-203ENST00000612672 BRF1Q92994 677 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms