RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ALCAMQ13740 583 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 TTLL4Q14679 1199 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 PTPN21Q16825 1174 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 CELF3Q5SZQ8 465 aaKnown RBP9.81□□□□□ -0.84
CCDC47-207ENST00000612558 FAM160B1Q5W0V3 765 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 PLA2G4FQ68DD2 849 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 CCDC62Q6P9F0 684 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 ARMCX2Q7L311 632 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 MAEAQ7L5Y9 396 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 TRMT1LQ7Z2T5 733 aaKnown RBP9.81□□□□□ -0.84
CCDC47-207ENST00000612558 PLEKHH3Q7Z736 793 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 DPP9Q86TI2 863 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 PPFIBP1Q86W92 1011 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 FBXO16Q8IX29 292 aaPredicted RBP9.81□□□□□ -0.84
CCDC47-207ENST00000612558 SLC17A8Q8NDX2 589 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 KIAA1524Q8TCG1 905 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 AFAP1L1Q8TED9 768 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 SCFD2Q8WU76 684 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 CCDC102AQ96A19 550 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 SH2D3AQ9BRG2 576 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 NOC4LQ9BVI4 516 aaKnown RBP9.81□□□□□ -0.84
CCDC47-207ENST00000612558 C17orf75Q9HAS0 396 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 RRAGDQ9NQL2 400 aaPredicted RBP9.81□□□□□ -0.84
CCDC47-207ENST00000612558 CYP26B1Q9NR63 512 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 DIS3Q9Y2L1 958 aaKnown RBP9.81□□□□□ -0.84
CCDC47-207ENST00000612558 PLXNA1Q9UIW2 1896 aa9.81□□□□□ -0.84
CCDC47-207ENST00000612558 SLC15A5A6NIM6 579 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 ARIH2O95376 493 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 TXNP10599 105 aaKnown RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 SKILP12757 684 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 ATP4AP20648 1035 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 NR2F2P24468 414 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 TCF7P36402 384 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 STAT5BP51692 787 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 MARSP56192 900 aaKnown RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 TBC1D8BQ0IIM8 1120 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 TRIM14Q14142 442 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 TAF1CQ15572 869 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 NFIL3Q16649 462 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 MAN2A1Q16706 1144 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 ZC2HC1CQ53FD0 456 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 MIIPQ5JXC2 388 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 MAMDC4Q6UXC1 1216 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 DHX37Q8IY37 1157 aaKnown RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 SMC1BQ8NDV3 1235 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 MCPH1Q8NEM0 835 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 KCNV2Q8TDN2 545 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 KIFAP3Q92845 792 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 STRA6Q9BX79 667 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 AZI2Q9H6S1 392 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 VTA1Q9NP79 307 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 PDLIM7Q9NR12 457 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 NRBP2Q9NSY0 501 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 SLC5A4Q9NY91 659 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 CPA4Q9UI42 421 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 KCNG1Q9UIX4 513 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 PYCARDQ9ULZ3 195 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 ADGRA2Q96PE1 1338 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 RBM47A0AV96 593 aaKnown RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 FAM155AB1AL88 458 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 AKR1B15C9JRZ8 316 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 K7ENM7 598 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 PES1O00541 588 aaKnown RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 NOP56O00567 594 aaKnown RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 TLR2O60603 784 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 TPM1P09493 284 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 CLCN1P35523 988 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 RPIAP49247 311 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 SMTNP53814 917 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 RTP1P59025 263 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 CCZ1BP86790 482 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 CCZ1P86791 482 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 KCNA1Q09470 495 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 SREBF2Q12772 1141 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 CCDC40Q4G0X9 1142 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 VWA3BQ502W6 1294 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 FKBP15Q5T1M5 1219 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 FAM102BQ5T8I3 360 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 CCDC112Q8NEF3 446 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 GOLGA5Q8TBA6 731 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 HHIPL1Q96JK4 782 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 PCYT2Q99447 389 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 GPR20Q99678 358 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 NIFKQ9BYG3 293 aaKnown RBP9.8□□□□□ -0.84
CCDC47-207ENST00000612558 GBP3Q9H0R5 595 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 ST6GALNAC4Q9H4F1 302 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 TMEM206Q9H813 350 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 ATP6V0A4Q9HBG4 840 aa9.8□□□□□ -0.84
CCDC47-207ENST00000612558 TGFB1I1O43294 461 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 LGR5O75473 907 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 NR3C1P04150 777 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 PEX3P56589 373 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 GTF2BQ00403 316 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 RBL2Q08999 1139 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 FOXC1Q12948 553 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 DMP1Q13316 513 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-207ENST00000612558 HSDL1Q3SXM5 330 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 MTERF2Q49AM1 385 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 TAPT1Q6NXT6 567 aa9.79□□□□□ -0.84
CCDC47-207ENST00000612558 C17orf99Q6UX52 265 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms