RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 ANKRD11Q6UB99 2663 aaPredicted RBP11.73□□□□□ -0.53
SSX3-204ENST00000612497 MYH15Q9Y2K3 1946 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 COL1A2P08123 1366 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 A0A0U1RQF3 1178 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 CNPP09543 421 aaKnown RBP11.72□□□□□ -0.53
SSX3-204ENST00000612497 MYBP10242 640 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 PDE1AP54750 535 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 STARD6P59095 220 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 WTAPQ15007 396 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 FAM160B1Q5W0V3 765 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 CYB5R4Q7L1T6 521 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 BCL7CQ8WUZ0 217 aaPredicted RBP11.72□□□□□ -0.53
SSX3-204ENST00000612497 RRP36Q96EU6 259 aaKnown RBP11.72□□□□□ -0.53
SSX3-204ENST00000612497 PSTPIP2Q9H939 334 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 MAN1C1Q9NR34 630 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 SLC2A4RGQ9NR83 387 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 KCNH7Q9NS40 1196 aa11.72□□□□□ -0.53
SSX3-204ENST00000612497 SEC63Q9UGP8 760 aaKnown RBP11.72□□□□□ -0.53
SSX3-204ENST00000612497 FRYQ5TBA9 3013 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 NFASCO94856 1347 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.71□□□□□ -0.53
SSX3-204ENST00000612497 KANSL1LA0AUZ9 987 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 CARNS1A5YM72 827 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 SPDYE3A6NKU9 549 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 SLC30A4O14863 429 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 INPPL1O15357 1258 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 TBC1D4O60343 1298 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 GALTP07902 379 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 LAMP2P13473 410 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.53
SSX3-204ENST00000612497 NLRP11P59045 1033 aaKnown RBP11.71□□□□□ -0.53
SSX3-204ENST00000612497 RNASELQ05823 741 aaKnown RBP11.71□□□□□ -0.53
SSX3-204ENST00000612497 SPEM2Q0P670 501 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 SNW1Q13573 536 aaKnown RBP11.71□□□□□ -0.53
SSX3-204ENST00000612497 UBXN2BQ14CS0 331 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 ANKRD45Q5TZF3 282 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 PDXDC2PQ6P474 469 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 ELMSAN1Q6PJG2 1045 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 TRMT1LQ7Z2T5 733 aaKnown RBP11.71□□□□□ -0.53
SSX3-204ENST00000612497 ZNF598Q86UK7 904 aaKnown RBP11.71□□□□□ -0.53
SSX3-204ENST00000612497 CKAP2LQ8IYA6 745 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 ZBTB44Q8NCP5 570 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 CMASQ8NFW8 434 aaPredicted RBP11.71□□□□□ -0.53
SSX3-204ENST00000612497 NETO1Q8TDF5 533 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 SMG7Q92540 1137 aaKnown RBP11.71□□□□□ -0.53
SSX3-204ENST00000612497 VN1R3Q9BXE9 311 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 PIDD1Q9HB75 910 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 ANGPTL2Q9UKU9 493 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 NUMBLQ9Y6R0 609 aa11.71□□□□□ -0.53
SSX3-204ENST00000612497 ERICH2A1L162 156 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 FAM170BA6NMN3 283 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 ZBTB42B2RXF5 422 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 DDX39AO00148 427 aaKnown RBP11.7□□□□□ -0.54
SSX3-204ENST00000612497 C2CD2LO14523 706 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 IFIT3O14879 490 aaKnown RBP11.7□□□□□ -0.54
SSX3-204ENST00000612497 LILRB5O75023 590 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 ATG7O95352 703 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 C22orf31O95567 290 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 SDSP20132 328 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 EIF4BP23588 611 aaKnown RBP11.7□□□□□ -0.54
SSX3-204ENST00000612497 HTR4Q13639 388 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 UBE2SQ16763 222 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 LONRF3Q496Y0 759 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 TSSK4Q6SA08 328 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 CWC27Q6UX04 472 aaKnown RBP11.7□□□□□ -0.54
SSX3-204ENST00000612497 CYP26C1Q6V0L0 522 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 GET4Q7L5D6 327 aaPredicted RBP11.7□□□□□ -0.54
SSX3-204ENST00000612497 BBXQ8WY36 941 aaPredicted RBP11.7□□□□□ -0.54
SSX3-204ENST00000612497 ZNF668Q96K58 619 aaPredicted RBP11.7□□□□□ -0.54
SSX3-204ENST00000612497 MXRA8Q9BRK3 442 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 GBP3Q9H0R5 595 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 NRDE2Q9H7Z3 1164 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 ZNF302Q9NR11 478 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 MRPL17Q9NRX2 175 aaKnown RBP11.7□□□□□ -0.54
SSX3-204ENST00000612497 DACT1Q9NYF0 836 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.7□□□□□ -0.54
SSX3-204ENST00000612497 RAB23Q9ULC3 237 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 PCDHA6Q9UN73 950 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 AKT3Q9Y243 479 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 INPP5FQ9Y2H2 1132 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 MTF2Q9Y483 593 aaPredicted RBP11.7□□□□□ -0.54
SSX3-204ENST00000612497 PCDHA8Q9Y5H6 950 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.7□□□□□ -0.54
SSX3-204ENST00000612497 DOCK6Q96HP0 2047 aa11.7□□□□□ -0.54
SSX3-204ENST00000612497 COL4A3Q01955 1670 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 MTCL1Q9Y4B5 1905 aaKnown RBP11.69□□□□□ -0.54
SSX3-204ENST00000612497 IGKV6D-21A0A0A0MT36 114 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 ANHXE9PGG2 379 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 RFPL2O75678 378 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 FGFR4P22455 802 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 KIF5BP33176 963 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 SLC11A1P49279 550 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 CLCN3P51790 818 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 GPC5P78333 572 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 TROAPQ12815 778 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 ITGB3BPQ13352 177 aaPredicted RBP11.69□□□□□ -0.54
SSX3-204ENST00000612497 LPAL2Q16609 132 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 CATIPQ7Z7H3 387 aa11.69□□□□□ -0.54
SSX3-204ENST00000612497 CCDC60Q8IWA6 550 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms