RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SART1O43290 800 aaKnown RBP18.71■□□□□ 0.59
NEK3-206ENST00000611833 INPP5BP32019 993 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 PTGER2P43116 358 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 ERVK-9P63128 1117 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 CUL1Q13616 776 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 ARHGAP44Q17R89 818 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 TTC19Q6DKK2 380 aaPredicted RBP18.71■□□□□ 0.59
NEK3-206ENST00000611833 MAEAQ7L5Y9 396 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 RTKN2Q8IZC4 609 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 SH2D3CQ8N5H7 860 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 CTNNBL1Q8WYA6 563 aaPredicted RBP18.71■□□□□ 0.59
NEK3-206ENST00000611833 RIT2Q99578 217 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 STRA6Q9BX79 667 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 SEPT11Q9NVA2 429 aaKnown RBP18.71■□□□□ 0.59
NEK3-206ENST00000611833 APEX2Q9UBZ4 518 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 PGAP2Q9UHJ9 254 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 CCPG1Q9ULG6 757 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 RGPD3A6NKT7 1758 aaPredicted RBP18.71■□□□□ 0.59
NEK3-206ENST00000611833 RGPD4Q7Z3J3 1758 aa18.71■□□□□ 0.59
NEK3-206ENST00000611833 PPP1R37O75864 691 aa18.71■□□□□ 0.58
NEK3-206ENST00000611833 ABCB4P21439 1286 aa18.71■□□□□ 0.58
NEK3-206ENST00000611833 GRIPAP1Q4V328 841 aa18.71■□□□□ 0.58
NEK3-206ENST00000611833 FAM83AQ86UY5 434 aa18.71■□□□□ 0.58
NEK3-206ENST00000611833 IL31RAQ8NI17 732 aa18.71■□□□□ 0.58
NEK3-206ENST00000611833 SLC35G2Q8TBE7 412 aa18.71■□□□□ 0.58
NEK3-206ENST00000611833 PIK3R5Q8WYR1 880 aa18.71■□□□□ 0.58
NEK3-206ENST00000611833 HOOK2Q96ED9 719 aa18.71■□□□□ 0.58
NEK3-206ENST00000611833 PDGFDQ9GZP0 370 aaPredicted RBP18.71■□□□□ 0.58
NEK3-206ENST00000611833 DDX47Q9H0S4 455 aaKnown RBP18.71■□□□□ 0.58
NEK3-206ENST00000611833 RASSF4Q9H2L5 321 aa18.71■□□□□ 0.58
NEK3-206ENST00000611833 OSGEPQ9NPF4 335 aa18.71■□□□□ 0.58
NEK3-206ENST00000611833 K7ENM7 598 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 NFIBO00712 420 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 EIF3HO15372 352 aaKnown RBP eCLIP18.7■□□□□ 0.58
NEK3-206ENST00000611833 ICAM1P05362 532 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 TMEM253P0C7T8 217 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 KRT13P13646 458 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 TNFAIP3P21580 790 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 BFSP1Q12934 665 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 PADI6Q6TGC4 694 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 MIER3Q7Z3K6 550 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 MAATS1Q7Z4T9 603 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 EIF1ADQ8N9N8 165 aaKnown RBP18.7■□□□□ 0.58
NEK3-206ENST00000611833 PROCA1Q8NCQ7 364 aaPredicted RBP18.7■□□□□ 0.58
NEK3-206ENST00000611833 RFFLQ8WZ73 363 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 KCNH7Q9NS40 1196 aa18.7■□□□□ 0.58
NEK3-206ENST00000611833 LOXHD1Q8IVV2 1947 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 A6NNZ2 444 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 ASNSP08243 561 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 ZBTB48P10074 688 aaPredicted RBP18.69■□□□□ 0.58
NEK3-206ENST00000611833 SKOR1P84550 965 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 SF3B2Q13435 895 aaKnown RBP18.69■□□□□ 0.58
NEK3-206ENST00000611833 TUBB8Q3ZCM7 444 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 RASGEF1CQ8N431 466 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 BCAS4Q8TDM0 211 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 HES6Q96HZ4 224 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 GPR88Q9GZN0 384 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 SCAF8Q9UPN6 1271 aaKnown RBP18.69■□□□□ 0.58
NEK3-206ENST00000611833 RPTORQ8N122 1335 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 BUB1BO60566 1050 aaPredicted RBP18.69■□□□□ 0.58
NEK3-206ENST00000611833 HSPA9P38646 679 aaKnown RBP18.69■□□□□ 0.58
NEK3-206ENST00000611833 TNIP1Q15025 636 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 CD302Q8IX05 232 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 CCDC26Q8TAB7 109 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 NEK9Q8TD19 979 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 ZNF341Q9BYN7 854 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 RABEP2Q9H5N1 569 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 PLAAQ9Y263 795 aa18.69■□□□□ 0.58
NEK3-206ENST00000611833 FAM170AA1A519 330 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 DHX15O43143 795 aaKnown RBP18.68■□□□□ 0.58
NEK3-206ENST00000611833 BCRP11274 1271 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 ITGA4P13612 1032 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 ATP1A2P50993 1020 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 NBPF9Q3BBW0 867 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 DDX42Q86XP3 938 aaKnown RBP eCLIP18.68■□□□□ 0.58
NEK3-206ENST00000611833 SLC9A9Q8IVB4 645 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 MTMR14Q8NCE2 650 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 CLEC4DQ8WXI8 215 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 LARSQ9P2J5 1176 aaKnown RBP18.68■□□□□ 0.58
NEK3-206ENST00000611833 NCANO14594 1321 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 LRRN2O75325 713 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 CCT5P48643 541 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 PHLDB3Q6NSJ2 640 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 PCIF1Q9H4Z3 704 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 STK32BQ9NY57 414 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 AMACRQ9UHK6 382 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 SAMM50Q9Y512 469 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 GRIN2DO15399 1336 aa18.68■□□□□ 0.58
NEK3-206ENST00000611833 GOLGA6L10A6NI86 522 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 WNT10BO00744 389 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 MAP3K10Q02779 954 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 EN1Q05925 392 aaPredicted RBP18.67■□□□□ 0.58
NEK3-206ENST00000611833 CETN1Q12798 172 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 ITGB3BPQ13352 177 aaPredicted RBP18.67■□□□□ 0.58
NEK3-206ENST00000611833 CEP85LQ5SZL2 805 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 LRRC45Q96CN5 670 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 SYT11Q9BT88 431 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 SLITRK6Q9H5Y7 841 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 DAAM1Q9Y4D1 1078 aa18.67■□□□□ 0.58
NEK3-206ENST00000611833 ZHX2Q9Y6X8 837 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms