RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SAAL1Q96ER3 474 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 PSMD1Q99460 953 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 PLCD4Q9BRC7 762 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 CNOT10Q9H9A5 744 aaKnown RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 GMNCA6NCL1 334 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 FAM86B1E9PN63 330 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 PODXLO00592 558 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 ENTPD3O75355 529 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 FAM86B2P0C5J1 330 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 MDH1P40925 334 aaKnown RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 PIK3CAP42336 1068 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 ECE1P42892 770 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 BPIFB4P59827 614 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 PPP2R2AP63151 447 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 SLMAPQ14BN4 828 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 APOBEC3HQ6NTF7 200 aaKnown RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 FOXR1Q6PIV2 292 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 AENQ8WTP8 325 aaKnown RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.36□□□□□ -0.91
LIG4-204ENST00000611712 RMDN3Q96TC7 470 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 ISCUQ9H1K1 167 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 EHD4Q9H223 541 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 CNOT8Q9UFF9 292 aaKnown RBP9.36□□□□□ -0.91
LIG4-204ENST00000611712 FEM1BQ9UK73 627 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 ODF2LQ9ULJ1 636 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 MYH2Q9UKX2 1941 aa9.36□□□□□ -0.91
LIG4-204ENST00000611712 LSP1P33241 339 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 CASP5P51878 434 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 SEC24CP53992 1094 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 PPP2R5AQ15172 486 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 UAP1Q16222 522 aaPredicted RBP9.35□□□□□ -0.91
LIG4-204ENST00000611712 ACER1Q8TDN7 264 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 CALR3Q96L12 384 aaKnown RBP9.35□□□□□ -0.91
LIG4-204ENST00000611712 TTYH3Q9C0H2 523 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 VPS37BQ9H9H4 285 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 KCNG1Q9UIX4 513 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 ZNF148Q9UQR1 794 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 USP54Q70EL1 1684 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 M0R2N6 131 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 EIF3DO15371 548 aaKnown RBP eCLIP9.35□□□□□ -0.91
LIG4-204ENST00000611712 ACSL3O95573 720 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 SYF2O95926 243 aaKnown RBP9.35□□□□□ -0.91
LIG4-204ENST00000611712 PMS2P54278 862 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 DDR1Q08345 913 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 ADCY1Q08828 1119 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 CEP128Q6ZU80 1094 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 CERS5Q8N5B7 392 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 MKNK1Q9BUB5 465 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 IQCGQ9H095 443 aaKnown RBP9.35□□□□□ -0.91
LIG4-204ENST00000611712 AGPAT3Q9NRZ7 376 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 SUCLA2Q9P2R7 463 aaPredicted RBP9.35□□□□□ -0.91
LIG4-204ENST00000611712 ANAPC7Q9UJX3 599 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 PCDHB4Q9Y5E5 795 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 ROBO3Q96MS0 1386 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 H0YCG3 227 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 CYP26A1O43174 497 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 ZNF564Q8TBZ8 553 aaPredicted RBP9.35□□□□□ -0.91
LIG4-204ENST00000611712 CCT8L2Q96SF2 557 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 NUP85Q9BW27 656 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 CHORDC1Q9UHD1 332 aaPredicted RBP9.35□□□□□ -0.91
LIG4-204ENST00000611712 TRAF3IP3Q9Y228 551 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 CD2APQ9Y5K6 639 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 MYO3BQ8WXR4 1341 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 DISP2A7MBM2 1401 aa9.35□□□□□ -0.91
LIG4-204ENST00000611712 DENND3A2RUS2 1198 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 FAM153BP0C7A2 387 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 TMEM253P0C7T8 217 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 HOXA10P31260 410 aaPredicted RBP9.34□□□□□ -0.91
LIG4-204ENST00000611712 COPB2P35606 906 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 ZBTB16Q05516 673 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 FAM153CQ494X1 144 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 MTERF2Q49AM1 385 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 COBLL1Q53SF7 1204 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 RNF207Q6ZRF8 634 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 CCDC13Q8IYE1 715 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 PRPF38AQ8NAV1 312 aaKnown RBP9.34□□□□□ -0.91
LIG4-204ENST00000611712 TSEN2Q8NCE0 465 aaKnown RBP9.34□□□□□ -0.91
LIG4-204ENST00000611712 MPHOSPH6Q99547 160 aaKnown RBP9.34□□□□□ -0.91
LIG4-204ENST00000611712 EPN3Q9H201 632 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 DNAJC5Q9H3Z4 198 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 TBC1D22BQ9NU19 505 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 FBXO28Q9NVF7 368 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 RAB20Q9NX57 234 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 FAM153AQ9UHL3 310 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 SERPINA10Q9UK55 444 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 LAMB4A4D0S4 1761 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 FAM187AA6NFU0 413 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 WDR64B1ANS9 1081 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 KRT19P08727 400 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 RFX1P22670 979 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 CHRNA3P32297 505 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 HSD17B3P37058 310 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 SLC12A3P55017 1021 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 Q4G0T1 1027 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 BRDTQ58F21 947 aaPredicted RBP9.34□□□□□ -0.91
LIG4-204ENST00000611712 C6orf118Q5T5N4 469 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 CYP4F22Q6NT55 531 aa9.34□□□□□ -0.91
LIG4-204ENST00000611712 CCDC137Q6PK04 289 aaKnown RBP9.34□□□□□ -0.91
LIG4-204ENST00000611712 ARMC9Q7Z3E5 817 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms