RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 FTLP02792 175 aaPredicted RBP22.08■■□□□ 1.12
SSBP3-216ENST00000610401 SCP2P22307 547 aa22.08■■□□□ 1.12
SSBP3-216ENST00000610401 SOX5P35711 763 aa22.08■■□□□ 1.12
SSBP3-216ENST00000610401 GJC1P36383 396 aa22.08■■□□□ 1.12
SSBP3-216ENST00000610401 SNCBQ16143 134 aa22.08■■□□□ 1.12
SSBP3-216ENST00000610401 XPO6Q96QU8 1125 aaKnown RBP22.08■■□□□ 1.12
SSBP3-216ENST00000610401 TACO1Q9BSH4 297 aaKnown RBP22.08■■□□□ 1.12
SSBP3-216ENST00000610401 TMEM150BA6NC51 233 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 A6NNZ2 444 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 HLA-DOAP06340 250 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 TUBB8Q3ZCM7 444 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 SYT2Q8N9I0 419 aaPredicted RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 CHMP6Q96FZ7 201 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 TYW1Q9NV66 732 aaKnown RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 INTS9Q9NV88 658 aaKnown RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 CTNNAL1Q9UBT7 734 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 SCAF8Q9UPN6 1271 aaKnown RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 SERPINB2P05120 415 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 CERKLQ49MI3 558 aaPredicted RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 RINT1Q6NUQ1 792 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 FAM178BQ8IXR5 827 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 PAIP2Q9BPZ3 127 aaKnown RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 ODF2LQ9ULJ1 636 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 BZW2Q9Y6E2 419 aaKnown RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 DLEC1Q9Y238 1755 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 GOLGA6L10A0A0M3HER8 536 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 SKAP2O75563 359 aaPredicted RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 GCFC2P16383 781 aaKnown RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 FMO5P49326 533 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 HP1BP3Q5SSJ5 553 aaPredicted RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 GPATCH4Q5T3I0 446 aaKnown RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 C6orf89Q6UWU4 347 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 SLC30A5Q8TAD4 765 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 C1orf54Q8WWF1 131 aa22.07■■□□□ 1.12
SSBP3-216ENST00000610401 DDX23Q9BUQ8 820 aaKnown RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 SUCLA2Q9P2R7 463 aaPredicted RBP22.07■■□□□ 1.12
SSBP3-216ENST00000610401 NF2P35240 595 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 SMTNP53814 917 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 GABPAQ06546 454 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 SPIRE1Q08AE8 756 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 BIRC3Q13489 604 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 PHLDB3Q6NSJ2 640 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 FAM228AQ86W67 206 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 SLF2Q8IX21 1173 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 SYCE1Q8N0S2 351 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 ERP44Q9BS26 406 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 DNAJC18Q9H819 358 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 F5H6K3 240 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 CHUKO15111 745 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 SNHG28P0DPA3 235 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 RPL21P46778 160 aaKnown RBP22.06■■□□□ 1.12
SSBP3-216ENST00000610401 KLRC3Q07444 240 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 MTMR3Q13615 1198 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 CAPN12Q6ZSI9 719 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 ETNPPLQ8TBG4 499 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 NEK9Q8TD19 979 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 CCDC127Q96BQ5 260 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 HES6Q96HZ4 224 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 TRAF3IP3Q9Y228 551 aa22.06■■□□□ 1.12
SSBP3-216ENST00000610401 ATF5Q9Y2D1 282 aaPredicted RBP22.06■■□□□ 1.12
SSBP3-216ENST00000610401 MYH7BA7E2Y1 1941 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 CCDC188H7C350 402 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 PDXKO00764 312 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 CCDC172P0C7W6 258 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 RPA1P27694 616 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 PSMC2P35998 433 aaKnown RBP22.05■■□□□ 1.12
SSBP3-216ENST00000610401 ICA1Q05084 483 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 ACCSLQ4AC99 568 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 LRIG3Q6UXM1 1119 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 FBXO11Q86XK2 927 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 ZNF622Q969S3 477 aaKnown RBP eCLIP22.05■■□□□ 1.12
SSBP3-216ENST00000610401 INTS2Q9H0H0 1204 aaKnown RBP22.05■■□□□ 1.12
SSBP3-216ENST00000610401 FRMD4BQ9Y2L6 1034 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 SPOPO43791 374 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 FERP16591 822 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 DRD4P21917 467 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 ATP2B4P23634 1241 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 KIAA1755Q5JYT7 1200 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 SLFN12Q8IYM2 578 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 ZDHHC14Q8IZN3 488 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 ATG4AQ8WYN0 398 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 RFFLQ8WZ73 363 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 TATDN2Q93075 761 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 ABCF3Q9NUQ8 709 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 XIRP1Q702N8 1843 aaKnown RBP22.05■■□□□ 1.12
SSBP3-216ENST00000610401 RASSF9O75901 435 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 DLATP10515 647 aaKnown RBP22.05■■□□□ 1.12
SSBP3-216ENST00000610401 TTC27Q6P3X3 843 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 PRUNE1Q86TP1 453 aa22.05■■□□□ 1.12
SSBP3-216ENST00000610401 LBHD1Q9BQE6 289 aaPredicted RBP22.05■■□□□ 1.12
SSBP3-216ENST00000610401 DDX3YO15523 660 aaKnown RBP22.04■■□□□ 1.12
SSBP3-216ENST00000610401 MARSP56192 900 aaKnown RBP22.04■■□□□ 1.12
SSBP3-216ENST00000610401 MYL7Q01449 175 aa22.04■■□□□ 1.12
SSBP3-216ENST00000610401 HS2ST1Q7LGA3 356 aa22.04■■□□□ 1.12
SSBP3-216ENST00000610401 CCDC197Q8NCU1 140 aa22.04■■□□□ 1.12
SSBP3-216ENST00000610401 FAM114A2Q9NRY5 505 aa22.04■■□□□ 1.12
SSBP3-216ENST00000610401 STXBP5LQ9Y2K9 1186 aa22.04■■□□□ 1.12
SSBP3-216ENST00000610401 LLGL2Q6P1M3 1020 aa22.04■■□□□ 1.12
SSBP3-216ENST00000610401 CCDC137Q6PK04 289 aaKnown RBP22.04■■□□□ 1.12
SSBP3-216ENST00000610401 PPM1KQ8N3J5 372 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms