RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 HIBCHQ6NVY1 386 aaPredicted RBP24.18■■□□□ 1.46
SHANK2-220ENST00000608988 DPP8Q6V1X1 898 aaPredicted RBP24.18■■□□□ 1.46
SHANK2-220ENST00000608988 POLR3CQ9BUI4 534 aaPredicted RBP24.18■■□□□ 1.46
SHANK2-220ENST00000608988 TRIM31Q9BZY9 425 aa24.18■■□□□ 1.46
SHANK2-220ENST00000608988 GOPCQ9HD26 462 aa24.18■■□□□ 1.46
SHANK2-220ENST00000608988 OSGEPQ9NPF4 335 aa24.18■■□□□ 1.46
SHANK2-220ENST00000608988 GRHL1Q9NZI5 618 aa24.18■■□□□ 1.46
SHANK2-220ENST00000608988 BACH1O14867 736 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 ALAS1P13196 640 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 PDE6CP51160 858 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 ZNF131P52739 623 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 FAM186BQ8IYM0 893 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 LRRC34Q8IZ02 419 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 CRYGNQ8WXF5 182 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 AZI2Q9H6S1 392 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 EBF2Q9HAK2 575 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 NR2E1Q9Y466 385 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 EYA4O95677 639 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 SPATA31C1P0DKV0 1188 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 TNFAIP3P21580 790 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 CTNNA2P26232 953 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 RFC4P35249 363 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 PLTPP55058 493 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 PRPF4BQ13523 1007 aaKnown RBP24.17■■□□□ 1.46
SHANK2-220ENST00000608988 KIF22Q14807 665 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 PPP2R5AQ15172 486 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 GLYCTKQ8IVS8 523 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 RSRC1Q96IZ7 334 aaKnown RBP24.17■■□□□ 1.46
SHANK2-220ENST00000608988 BATF3Q9NR55 127 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 DNAJC12Q9UKB3 198 aa24.17■■□□□ 1.46
SHANK2-220ENST00000608988 RPTORQ8N122 1335 aa24.16■■□□□ 1.46
SHANK2-220ENST00000608988 GREB1LQ9C091 1923 aaPredicted RBP24.16■■□□□ 1.46
SHANK2-220ENST00000608988 USP17L10C9JJH3 530 aa24.16■■□□□ 1.46
SHANK2-220ENST00000608988 RARGP13631 454 aa24.16■■□□□ 1.46
SHANK2-220ENST00000608988 STAT3P40763 770 aa24.16■■□□□ 1.46
SHANK2-220ENST00000608988 FMO5P49326 533 aa24.16■■□□□ 1.46
SHANK2-220ENST00000608988 PABPC4Q13310 644 aaKnown RBP eCLIP24.16■■□□□ 1.46
SHANK2-220ENST00000608988 DRAP1Q14919 205 aaPredicted RBP24.16■■□□□ 1.46
SHANK2-220ENST00000608988 BARGINQ6ZT62 677 aa24.16■■□□□ 1.46
SHANK2-220ENST00000608988 CYFIP1Q7L576 1253 aa24.16■■□□□ 1.46
SHANK2-220ENST00000608988 DNAAF5Q86Y56 855 aa24.16■■□□□ 1.46
SHANK2-220ENST00000608988 RPS6KC1Q96S38 1066 aa24.16■■□□□ 1.46
SHANK2-220ENST00000608988 MOV10L1Q9BXT6 1211 aaKnown RBP24.16■■□□□ 1.46
SHANK2-220ENST00000608988 HOMER3Q9NSC5 361 aa24.16■■□□□ 1.46
SHANK2-220ENST00000608988 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.16■■□□□ 1.46
SHANK2-220ENST00000608988 ATP2C2O75185 946 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 GCNT3O95395 438 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 CASP4P49662 377 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 ZNF268Q14587 947 aaPredicted RBP24.15■■□□□ 1.46
SHANK2-220ENST00000608988 MAB21L3Q8N8X9 362 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 FBXO25Q8TCJ0 367 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 LRRC4CQ9HCJ2 640 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 OAS1P00973 400 aaKnown RBP24.15■■□□□ 1.46
SHANK2-220ENST00000608988 ALADP13716 330 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 SLC29A2Q14542 456 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 CYP1B1Q16678 543 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 TTBK2Q6IQ55 1244 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 GJB7Q6PEY0 223 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 ERVK-5Q9HDB9 667 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 SNX24Q9Y343 169 aa24.15■■□□□ 1.46
SHANK2-220ENST00000608988 TGFB1I1O43294 461 aa24.14■■□□□ 1.45
SHANK2-220ENST00000608988 FOSP01100 380 aaPredicted RBP24.14■■□□□ 1.45
SHANK2-220ENST00000608988 ATP5DP30049 168 aa24.14■■□□□ 1.45
SHANK2-220ENST00000608988 ARHGAP4P98171 946 aa24.14■■□□□ 1.45
SHANK2-220ENST00000608988 LMNB2Q03252 620 aa24.14■■□□□ 1.45
SHANK2-220ENST00000608988 STXBP4Q6ZWJ1 553 aa24.14■■□□□ 1.45
SHANK2-220ENST00000608988 TRMT10CQ7L0Y3 403 aaKnown RBP24.14■■□□□ 1.45
SHANK2-220ENST00000608988 SEL1LQ9UBV2 794 aa24.14■■□□□ 1.45
SHANK2-220ENST00000608988 IGSF9BQ9UPX0 1349 aa24.14■■□□□ 1.45
SHANK2-220ENST00000608988 OPLAHO14841 1288 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 CLNS1AP54105 237 aaKnown RBP24.13■■□□□ 1.45
SHANK2-220ENST00000608988 PSMC6P62333 389 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 CNGA2Q16280 664 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 GLG1Q92896 1179 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 ELAC2Q9BQ52 826 aaKnown RBP24.13■■□□□ 1.45
SHANK2-220ENST00000608988 APEX2Q9UBZ4 518 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 SRP68Q9UHB9 627 aaKnown RBP24.13■■□□□ 1.45
SHANK2-220ENST00000608988 BAIAP2L1Q9UHR4 511 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 SUGT1Q9Y2Z0 365 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 PCDHB13Q9Y5F0 798 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 RASGRF2O14827 1237 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 MTA2O94776 668 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 VIMP08670 466 aaKnown RBP24.13■■□□□ 1.45
SHANK2-220ENST00000608988 KRT13P13646 458 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 GBP2P32456 591 aaPredicted RBP24.13■■□□□ 1.45
SHANK2-220ENST00000608988 MFSD14BQ5SR56 506 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 DCAF4Q8WV16 495 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 GPR88Q9GZN0 384 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 INTS2Q9H0H0 1204 aaKnown RBP24.13■■□□□ 1.45
SHANK2-220ENST00000608988 MTUS1Q9ULD2 1270 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 PCDHA3Q9Y5H8 950 aa24.13■■□□□ 1.45
SHANK2-220ENST00000608988 TLDC2A0PJX2 215 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 O00370 1275 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 RIPK2O43353 540 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 SNX3O60493 162 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 CIITAP33076 1130 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 E2F5Q15329 346 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 QRICH1Q2TAL8 776 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 SEL1L2Q5TEA6 688 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 PRELID2Q8N945 189 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms