RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 INTS7Q9NVH2 962 aaKnown RBP7.4□□□□□ -1.22
LINC00458-206ENST00000607494 CEP72Q9P209 647 aa7.4□□□□□ -1.22
LINC00458-206ENST00000607494 GOLGA6L22H0YM25 854 aa7.39□□□□□ -1.23
LINC00458-206ENST00000607494 SDHAP31040 664 aa7.39□□□□□ -1.23
LINC00458-206ENST00000607494 MCM7P33993 719 aa7.39□□□□□ -1.23
LINC00458-206ENST00000607494 TUBA3CQ13748 450 aa7.39□□□□□ -1.23
LINC00458-206ENST00000607494 TUBA3EQ6PEY2 450 aa7.39□□□□□ -1.23
LINC00458-206ENST00000607494 CALML6Q8TD86 181 aa7.39□□□□□ -1.23
LINC00458-206ENST00000607494 FOXRED1Q96CU9 486 aaPredicted RBP7.39□□□□□ -1.23
LINC00458-206ENST00000607494 MAGEC2Q9UBF1 373 aaPredicted RBP7.39□□□□□ -1.23
LINC00458-206ENST00000607494 THRAP3Q9Y2W1 955 aaKnown RBP7.39□□□□□ -1.23
LINC00458-206ENST00000607494 M0R2C6 588 aa7.38□□□□□ -1.23
LINC00458-206ENST00000607494 ZBTB48P10074 688 aaPredicted RBP7.38□□□□□ -1.23
LINC00458-206ENST00000607494 APEX1P27695 318 aaKnown RBP7.38□□□□□ -1.23
LINC00458-206ENST00000607494 ATP2C1P98194 919 aaPredicted RBP7.38□□□□□ -1.23
LINC00458-206ENST00000607494 DDX53Q86TM3 631 aaKnown RBP7.38□□□□□ -1.23
LINC00458-206ENST00000607494 LRRTM3Q86VH5 581 aa7.38□□□□□ -1.23
LINC00458-206ENST00000607494 AFAP1L2Q8N4X5 818 aa7.38□□□□□ -1.23
LINC00458-206ENST00000607494 TARS2Q9BW92 718 aaKnown RBP7.38□□□□□ -1.23
LINC00458-206ENST00000607494 BOCQ9BWV1 1114 aa7.38□□□□□ -1.23
LINC00458-206ENST00000607494 NELFAQ9H3P2 528 aa7.38□□□□□ -1.23
LINC00458-206ENST00000607494 C11orf21Q9P2W6 132 aa7.38□□□□□ -1.23
LINC00458-206ENST00000607494 TCEAL9Q9UHQ7 104 aa7.38□□□□□ -1.23
LINC00458-206ENST00000607494 SH3BP1Q9Y3L3 701 aa7.38□□□□□ -1.23
LINC00458-206ENST00000607494 CTDP1Q9Y5B0 961 aaPredicted RBP7.38□□□□□ -1.23
LINC00458-206ENST00000607494 EID1Q9Y6B2 187 aa7.38□□□□□ -1.23
LINC00458-206ENST00000607494 NPTXRO95502 500 aa7.37□□□□□ -1.23
LINC00458-206ENST00000607494 SDSP20132 328 aa7.37□□□□□ -1.23
LINC00458-206ENST00000607494 ALDH6A1Q02252 535 aaKnown RBP7.37□□□□□ -1.23
LINC00458-206ENST00000607494 CNNM4Q6P4Q7 775 aa7.37□□□□□ -1.23
LINC00458-206ENST00000607494 LARP4BQ92615 738 aaKnown RBP7.37□□□□□ -1.23
LINC00458-206ENST00000607494 SAMD15Q9P1V8 674 aa7.37□□□□□ -1.23
LINC00458-206ENST00000607494 GIT1Q9Y2X7 761 aa7.37□□□□□ -1.23
LINC00458-206ENST00000607494 CCDC194A0A1B0GVG4 234 aa7.36□□□□□ -1.23
LINC00458-206ENST00000607494 A0A1W2PRX2 142 aa7.36□□□□□ -1.23
LINC00458-206ENST00000607494 RGS3P49796 1198 aa7.36□□□□□ -1.23
LINC00458-206ENST00000607494 KIF11P52732 1056 aa7.36□□□□□ -1.23
LINC00458-206ENST00000607494 ANTXR2P58335 489 aa7.36□□□□□ -1.23
LINC00458-206ENST00000607494 HHEXQ03014 270 aa7.36□□□□□ -1.23
LINC00458-206ENST00000607494 CRHR2Q13324 411 aa7.36□□□□□ -1.23
LINC00458-206ENST00000607494 FAM50AQ14320 339 aaKnown RBP7.36□□□□□ -1.23
LINC00458-206ENST00000607494 ZNF627Q7L945 461 aa7.36□□□□□ -1.23
LINC00458-206ENST00000607494 ATL2Q8NHH9 583 aa7.36□□□□□ -1.23
LINC00458-206ENST00000607494 ZNF483Q8TF39 744 aaPredicted RBP7.36□□□□□ -1.23
LINC00458-206ENST00000607494 CCDC136Q96JN2 1154 aa7.36□□□□□ -1.23
LINC00458-206ENST00000607494 SLC2A4RGQ9NR83 387 aa7.36□□□□□ -1.23
LINC00458-206ENST00000607494 GEMIN8Q9NWZ8 242 aaKnown RBP7.36□□□□□ -1.23
LINC00458-206ENST00000607494 WDR33Q9C0J8 1336 aaKnown RBP7.35□□□□□ -1.23
LINC00458-206ENST00000607494 WASHC2CQ9Y4E1 1318 aa7.35□□□□□ -1.23
LINC00458-206ENST00000607494 OPA1O60313 960 aa7.35□□□□□ -1.23
LINC00458-206ENST00000607494 GLRX3O76003 335 aaKnown RBP7.35□□□□□ -1.23
LINC00458-206ENST00000607494 CPEP16870 476 aa7.35□□□□□ -1.23
LINC00458-206ENST00000607494 RRP1BQ14684 758 aaKnown RBP7.35□□□□□ -1.23
LINC00458-206ENST00000607494 CC2D1AQ6P1N0 951 aaPredicted RBP7.35□□□□□ -1.23
LINC00458-206ENST00000607494 Q6ZRM9 215 aa7.35□□□□□ -1.23
LINC00458-206ENST00000607494 DDX46Q7L014 1031 aaKnown RBP7.35□□□□□ -1.23
LINC00458-206ENST00000607494 ADGRE4PQ86SQ3 457 aa7.35□□□□□ -1.23
LINC00458-206ENST00000607494 LDLRAD3Q86YD5 345 aa7.35□□□□□ -1.23
LINC00458-206ENST00000607494 CERS3Q8IU89 383 aa7.35□□□□□ -1.23
LINC00458-206ENST00000607494 PPM1KQ8N3J5 372 aa7.35□□□□□ -1.23
LINC00458-206ENST00000607494 AMER2Q8N7J2 671 aa7.35□□□□□ -1.23
LINC00458-206ENST00000607494 RPL10LQ96L21 214 aaKnown RBP7.35□□□□□ -1.23
LINC00458-206ENST00000607494 MSL2Q9HCI7 577 aa7.35□□□□□ -1.23
LINC00458-206ENST00000607494 C2orf78A6NCI8 922 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 DVL2O14641 736 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 MAP4K4O95819 1239 aaPredicted RBP7.34□□□□□ -1.23
LINC00458-206ENST00000607494 PRLP01236 227 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 SLC6A3Q01959 620 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 DPTQ07507 201 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 MAP3K12Q12852 859 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 ARHGAP44Q17R89 818 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 ZCCHC8Q6NZY4 707 aaKnown RBP7.34□□□□□ -1.23
LINC00458-206ENST00000607494 OTOP1Q7RTM1 612 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 TMPRSS6Q8IU80 811 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 AHI1Q8N157 1196 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 OR5AN1Q8NGI8 311 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 CLIP3Q96DZ5 547 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 GPHA2Q96T91 129 aa7.34□□□□□ -1.23
LINC00458-206ENST00000607494 REXO2Q9Y3B8 237 aaKnown RBP7.34□□□□□ -1.23
LINC00458-206ENST00000607494 TNPO3Q9Y5L0 923 aaKnown RBP7.34□□□□□ -1.23
LINC00458-206ENST00000607494 RBM8AQ9Y5S9 174 aaKnown RBP7.34□□□□□ -1.23
LINC00458-206ENST00000607494 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 PTPDC1A2A3K4 754 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 B4E1Z4 1266 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 ALDH1L1O75891 902 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 DNAJC8O75937 253 aaPredicted RBP7.33□□□□□ -1.24
LINC00458-206ENST00000607494 EYA4O95677 639 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 ADH4P08319 380 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 IGFALSP35858 605 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 SCNN1GP51170 649 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 ADCY7P51828 1080 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 GUCY2FP51841 1108 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 EPHB1P54762 984 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 ADAM8P78325 824 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 SLC25A3Q00325 362 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 ZNF460Q14592 562 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 KLHDC10Q6PID8 442 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 GAREM2Q75VX8 874 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 STRA8Q7Z7C7 330 aa7.33□□□□□ -1.24
LINC00458-206ENST00000607494 RABGGTAQ92696 567 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms