RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 RAB11FIP4Q86YS3 637 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 TMEM87AQ8NBN3 555 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 IGSF21Q96ID5 467 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 ZNF577Q9BSK1 485 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 NRBP2Q9NSY0 501 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 STK39Q9UEW8 545 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 EP300Q09472 2414 aaPredicted RBP16.96■□□□□ 0.3
SSBP4-214ENST00000607020 SETQ01105 290 aaPredicted RBP16.95■□□□□ 0.3
SSBP4-214ENST00000607020 MICU3Q86XE3 530 aa16.95■□□□□ 0.3
SSBP4-214ENST00000607020 RNF169Q8NCN4 708 aa16.95■□□□□ 0.3
SSBP4-214ENST00000607020 SFXN1Q9H9B4 322 aa16.95■□□□□ 0.3
SSBP4-214ENST00000607020 KCNK12Q9HB15 430 aa16.95■□□□□ 0.3
SSBP4-214ENST00000607020 IGSF9Q9P2J2 1179 aa16.95■□□□□ 0.3
SSBP4-214ENST00000607020 GABBR1Q9UBS5 961 aa16.95■□□□□ 0.3
SSBP4-214ENST00000607020 SLC27A2O14975 620 aa16.94■□□□□ 0.3
SSBP4-214ENST00000607020 GALTP07902 379 aa16.94■□□□□ 0.3
SSBP4-214ENST00000607020 NECTIN1Q15223 517 aa16.94■□□□□ 0.3
SSBP4-214ENST00000607020 APOA5Q6Q788 366 aa16.94■□□□□ 0.3
SSBP4-214ENST00000607020 TMC5Q6UXY8 1006 aa16.94■□□□□ 0.3
SSBP4-214ENST00000607020 C15orf39Q6ZRI6 1047 aa16.94■□□□□ 0.3
SSBP4-214ENST00000607020 CCDC149Q6ZUS6 474 aa16.94■□□□□ 0.3
SSBP4-214ENST00000607020 TMEM173Q86WV6 379 aaPredicted RBP16.94■□□□□ 0.3
SSBP4-214ENST00000607020 LRRC71Q8N4P6 559 aa16.94■□□□□ 0.3
SSBP4-214ENST00000607020 RHOBTB2Q9BYZ6 727 aa16.94■□□□□ 0.3
SSBP4-214ENST00000607020 LSG1Q9H089 658 aaKnown RBP16.94■□□□□ 0.3
SSBP4-214ENST00000607020 WNT16Q9UBV4 365 aa16.94■□□□□ 0.3
SSBP4-214ENST00000607020 ZNF862O60290 1169 aa16.93■□□□□ 0.3
SSBP4-214ENST00000607020 ZNF623O75123 536 aa16.93■□□□□ 0.3
SSBP4-214ENST00000607020 SKIP12755 728 aa16.93■□□□□ 0.3
SSBP4-214ENST00000607020 CIITAP33076 1130 aa16.93■□□□□ 0.3
SSBP4-214ENST00000607020 PHKA2P46019 1235 aa16.93■□□□□ 0.3
SSBP4-214ENST00000607020 CMASQ8NFW8 434 aaPredicted RBP16.93■□□□□ 0.3
SSBP4-214ENST00000607020 AUTS2Q8WXX7 1259 aa16.93■□□□□ 0.3
SSBP4-214ENST00000607020 NRDE2Q9H7Z3 1164 aa16.93■□□□□ 0.3
SSBP4-214ENST00000607020 ZNF292O60281 2723 aa16.93■□□□□ 0.3
SSBP4-214ENST00000607020 DMDP11532 3685 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 ESYT2A0FGR8 921 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 WDR64B1ANS9 1081 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 LILRB3O75022 631 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 ZC3H11AO75152 810 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSBP4-214ENST00000607020 LMNAP02545 664 aaKnown RBP16.92■□□□□ 0.3
SSBP4-214ENST00000607020 OATP04181 439 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 NEFLP07196 543 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 CA8P35219 290 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 CLCN4P51793 760 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 TARBP2Q15633 366 aaKnown RBP16.92■□□□□ 0.3
SSBP4-214ENST00000607020 PTPN14Q15678 1187 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 RTN1Q16799 776 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 LETM2Q2VYF4 491 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 NOMO2Q5JPE7 1267 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 JAKMIP3Q5VZ66 844 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 CYP26C1Q6V0L0 522 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 TRMT1LQ7Z2T5 733 aaKnown RBP16.92■□□□□ 0.3
SSBP4-214ENST00000607020 SIX5Q8N196 739 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 FEZF2Q8TBJ5 459 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 BCL7CQ8WUZ0 217 aaPredicted RBP16.92■□□□□ 0.3
SSBP4-214ENST00000607020 KLHL5Q96PQ7 755 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 EMILIN2Q9BXX0 1053 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 LRRC2Q9BYS8 371 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 GCOM2Q9BZD3 368 aaPredicted RBP16.92■□□□□ 0.3
SSBP4-214ENST00000607020 TBC1D13Q9NVG8 400 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 TCEAL9Q9UHQ7 104 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 FBXL21Q9UKT6 434 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 MYO10Q9HD67 2058 aa16.92■□□□□ 0.3
SSBP4-214ENST00000607020 OFD1O75665 1012 aa16.91■□□□□ 0.3
SSBP4-214ENST00000607020 FGFR4P22455 802 aa16.91■□□□□ 0.3
SSBP4-214ENST00000607020 CREB3L3Q68CJ9 461 aa16.91■□□□□ 0.3
SSBP4-214ENST00000607020 GLB1LQ6UWU2 654 aa16.91■□□□□ 0.3
SSBP4-214ENST00000607020 NLRP7Q8WX94 980 aa16.91■□□□□ 0.3
SSBP4-214ENST00000607020 RMDN1Q96DB5 314 aa16.91■□□□□ 0.3
SSBP4-214ENST00000607020 ZNF668Q96K58 619 aaPredicted RBP16.91■□□□□ 0.3
SSBP4-214ENST00000607020 VN1R3Q9BXE9 311 aa16.91■□□□□ 0.3
SSBP4-214ENST00000607020 ZMYND12Q9H0C1 365 aa16.91■□□□□ 0.3
SSBP4-214ENST00000607020 FAM217BQ9NTX9 383 aaPredicted RBP16.91■□□□□ 0.3
SSBP4-214ENST00000607020 IGKV6-21A0A0C4DH24 114 aa16.9■□□□□ 0.3
SSBP4-214ENST00000607020 PAPLNO95428 1278 aa16.9■□□□□ 0.3
SSBP4-214ENST00000607020 RCAN1P53805 252 aa16.9■□□□□ 0.3
SSBP4-214ENST00000607020 EXOSC10Q01780 885 aaKnown RBP16.9■□□□□ 0.3
SSBP4-214ENST00000607020 PFKFB3Q16875 520 aaPredicted RBP16.9■□□□□ 0.3
SSBP4-214ENST00000607020 NXPE3Q969Y0 559 aa16.9■□□□□ 0.3
SSBP4-214ENST00000607020 LENG9Q96B70 501 aa16.9■□□□□ 0.3
SSBP4-214ENST00000607020 SCLT1Q96NL6 688 aa16.9■□□□□ 0.3
SSBP4-214ENST00000607020 NIFKQ9BYG3 293 aaKnown RBP16.9■□□□□ 0.3
SSBP4-214ENST00000607020 INO80BQ9C086 356 aaPredicted RBP16.9■□□□□ 0.3
SSBP4-214ENST00000607020 DISC1Q9NRI5 854 aa16.9■□□□□ 0.3
SSBP4-214ENST00000607020 BRPF3Q9ULD4 1205 aa16.9■□□□□ 0.3
SSBP4-214ENST00000607020 WDR87Q6ZQQ6 2873 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 ZBTB43O43298 467 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 CNPP09543 421 aaKnown RBP16.89■□□□□ 0.29
SSBP4-214ENST00000607020 KLRC2P26717 231 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 SLC11A1P49279 550 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 RAB27AP51159 221 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 PRKCEQ02156 737 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 TBC1D8BQ0IIM8 1120 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 NONOQ15233 471 aaKnown RBP eCLIP16.89■□□□□ 0.291e-6■■■■□ 20.3
SSBP4-214ENST00000607020 PRR16Q569H4 304 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 CEP89Q96ST8 783 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 RIT2Q99578 217 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 FAM105AQ9NUU6 356 aa16.89■□□□□ 0.29
SSBP4-214ENST00000607020 EPS15L1Q9UBC2 864 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms