RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 TMEM161BQ8NDZ6 487 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 ASAP3Q8TDY4 903 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 SH3TC2Q8TF17 1288 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 LMBR1Q8WVP7 490 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 TRAPPC12Q8WVT3 735 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 PSPC1Q8WXF1 523 aaKnown RBP18.2■□□□□ 0.5
PMF1-206ENST00000606952 IFT74Q96LB3 600 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 SEMA6BQ9H3T3 888 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 POLD4Q9HCU8 107 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 TBC1D7Q9P0N9 293 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 TRAF3IP3Q9Y228 551 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 TRIP12Q14669 1992 aaPredicted RBP18.19■□□□□ 0.5
PMF1-206ENST00000606952 BECN2A8MW95 431 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 K7ENM7 598 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 ASAP2O43150 1006 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 ASGR1P07306 291 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 KLRC1P26715 233 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 PMS1P54277 932 aaKnown RBP18.19■□□□□ 0.5
PMF1-206ENST00000606952 KCNA10Q16322 511 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 KNOP1Q1ED39 458 aaKnown RBP18.19■□□□□ 0.5
PMF1-206ENST00000606952 EDRF1Q3B7T1 1238 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 L1TD1Q5T7N2 865 aaKnown RBP18.19■□□□□ 0.5
PMF1-206ENST00000606952 CDCA2Q69YH5 1023 aaPredicted RBP18.19■□□□□ 0.5
PMF1-206ENST00000606952 HAUS6Q7Z4H7 955 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 IFNLR1Q8IU57 520 aaPredicted RBP18.19■□□□□ 0.5
PMF1-206ENST00000606952 TMEM143Q96AN5 459 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 NFKBIZQ9BYH8 718 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 MAPK8IP1Q9UQF2 711 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 PHLPP2Q6ZVD8 1323 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 ADGRA3Q8IWK6 1321 aa18.19■□□□□ 0.5
PMF1-206ENST00000606952 SMIM35A0A1B0GVV1 85 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 GOLGA6L19H0YKK7 550 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 PDXKO00764 312 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 SOX10P56693 466 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 SNRPFP62306 86 aaKnown RBP18.18■□□□□ 0.5
PMF1-206ENST00000606952 DRP2Q13474 957 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 CAPSQ13938 189 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 SLC9C1Q4G0N8 1177 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 CDKAL1Q5VV42 579 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 EFCAB12Q6NXP0 572 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 CXCL17Q6UXB2 119 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 MAP4K3Q8IVH8 894 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 NOC3LQ8WTT2 800 aaKnown RBP18.18■□□□□ 0.5
PMF1-206ENST00000606952 ARMC5Q96C12 935 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 DUSP9Q99956 384 aaKnown RBP18.18■□□□□ 0.5
PMF1-206ENST00000606952 TMEM134Q9H6X4 195 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 TMEM206Q9H813 350 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 KMT5AQ9NQR1 393 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 TYW1Q9NV66 732 aaKnown RBP18.18■□□□□ 0.5
PMF1-206ENST00000606952 NFE2L3Q9Y4A8 694 aa18.18■□□□□ 0.5
PMF1-206ENST00000606952 PRPF6O94906 941 aaKnown RBP18.17■□□□□ 0.5
PMF1-206ENST00000606952 GNAT1P11488 350 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 TMOD1P28289 359 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 DNM2P50570 870 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 STX17P56962 302 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 PTPN11Q06124 597 aaPredicted RBP18.17■□□□□ 0.5
PMF1-206ENST00000606952 LAMTOR4Q0VGL1 99 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 ANKRD40Q6AI12 368 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 NFRKBQ6P4R8 1299 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 SARM1Q6SZW1 724 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 ZNF710Q8N1W2 664 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 PRPF31Q8WWY3 499 aaKnown RBP18.17■□□□□ 0.5
PMF1-206ENST00000606952 UNC93B1Q9H1C4 597 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 SETD4Q9NVD3 440 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 CGNQ9P2M7 1197 aaKnown RBP18.17■□□□□ 0.5
PMF1-206ENST00000606952 SUCLA2Q9P2R7 463 aaPredicted RBP18.17■□□□□ 0.5
PMF1-206ENST00000606952 HDAC6Q9UBN7 1215 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 GTF2IRD1Q9UHL9 959 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 PHF24Q9UPV7 400 aa18.17■□□□□ 0.5
PMF1-206ENST00000606952 C17orf102A2RUQ5 167 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 TRIM49BA6NDI0 452 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 SLC16A4O15374 487 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 PIGRP01833 764 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 ACLYP53396 1101 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 TPM4P67936 248 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 IGBP1P78318 339 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 MYBPC2Q14324 1141 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 HIC1Q14526 733 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 ZC2HC1CQ53FD0 456 aaPredicted RBP18.16■□□□□ 0.5
PMF1-206ENST00000606952 LRRC55Q6ZSA7 311 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 C12orf56Q8IXR9 622 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 LRRC71Q8N4P6 559 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 ARRDC4Q8NCT1 418 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 ACCSQ96QU6 501 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 TSG101Q99816 390 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 SEZ6LQ9BYH1 1024 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 THAP9Q9H5L6 903 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 SUGCTQ9HAC7 445 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 OGDHLQ9ULD0 1010 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 TBX20Q9UMR3 447 aa18.16■□□□□ 0.5
PMF1-206ENST00000606952 TGFB1I1O43294 461 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 CLCN3P51790 818 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 CDC42EP1Q00587 391 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 TFDP1Q14186 410 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 NBPF20Q3BBV1 942 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 TAS1R3Q7RTX0 852 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 ZNF410Q86VK4 478 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 SLC9A9Q8IVB4 645 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 KIAA0319LQ8IZA0 1049 aa18.15■□□□□ 0.5
PMF1-206ENST00000606952 C7orf31Q8N865 590 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms