RNA–Protein interactions for RNA: ENST00000606826.5

CSNK1A1-211, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-211ENST00000606826 SURF1Q15526 300 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 GLB1LQ6UWU2 654 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 HHIPL2Q6UWX4 724 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 OSTM1Q86WC4 334 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 KBTBD2Q8IY47 623 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 KLHL36Q8N4N3 616 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 TCP11L2Q8N4U5 519 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 STPG3Q8N7X2 389 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 NUDT10Q8NFP7 164 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 NUDT11Q96G61 164 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 DNAJC2Q99543 621 aaKnown RBP6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 CBLCQ9ULV8 474 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 SPATA31A1Q5TZJ5 1347 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 CRB1P82279 1406 aa6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 COL5A2P05997 1499 aaPredicted RBP6.91□□□□□ -1.3
CSNK1A1-211ENST00000606826 CCDC66A2RUB6 948 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 WNT9AO14904 365 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 NFATC3Q12968 1075 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 ARHGEF18Q6ZSZ5 1173 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 C16orf59Q7L2K0 433 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 ZSWIM2Q8NEG5 633 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 MBD6Q96DN6 1003 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 TACO1Q9BSH4 297 aaKnown RBP6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 PDGFDQ9GZP0 370 aaPredicted RBP6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 SLC52A2Q9HAB3 445 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 SLC39A2Q9NP94 309 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 SMPD4Q9NXE4 827 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 ARHGAP28Q9P2N2 729 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 SFMBT1Q9UHJ3 866 aa6.9□□□□□ -1.3
CSNK1A1-211ENST00000606826 A0A1W2PP64 1363 aa6.9□□□□□ -1.31
CSNK1A1-211ENST00000606826 ANKRD36BQ8N2N9 1353 aa6.9□□□□□ -1.31
CSNK1A1-211ENST00000606826 CCDC7Q96M83 1385 aa6.9□□□□□ -1.31
CSNK1A1-211ENST00000606826 FAM208AQ9UK61 1670 aaKnown RBP6.9□□□□□ -1.31
CSNK1A1-211ENST00000606826 BRWD3Q6RI45 1802 aa6.9□□□□□ -1.31
CSNK1A1-211ENST00000606826 MAN2B1O00754 1011 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 KCNK3O14649 394 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 EFCAB14O75071 495 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 COL6A1P12109 1028 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 NFKB2Q00653 900 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 FIGNQ5HY92 759 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 TOM1L2Q6ZVM7 507 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 LIMS2Q7Z4I7 341 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 CISD2Q8N5K1 135 aaKnown RBP6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 IGDCC4Q8TDY8 1250 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 KISS1RQ969F8 398 aaPredicted RBP6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 MKL1Q969V6 931 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 BORCS6Q96GS4 357 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 COG3Q96JB2 828 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 KCND1Q9NSA2 647 aa6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 PARP4Q9UKK3 1724 aaKnown RBP6.89□□□□□ -1.31
CSNK1A1-211ENST00000606826 CAMTA1Q9Y6Y1 1673 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 NFAT5O94916 1531 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 SMG6Q86US8 1419 aaKnown RBP6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 PARD3Q8TEW0 1356 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 WDR17Q8IZU2 1322 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 PRAMEF25A6NGN4 478 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 FAM90A27PA6NNH2 459 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 B4GALT4O60513 344 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 KNG1P01042 644 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 AMY2AP04746 511 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 CHGBP05060 677 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 AMY2BP19961 511 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 GJA4P35212 333 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 MAGEA10P43363 369 aaPredicted RBP6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 JAM2P57087 298 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 DBPQ10586 325 aaPredicted RBP6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 DBX2Q6ZNG2 339 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 RALYLQ86SE5 291 aaKnown RBP6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 CHST13Q8NET6 341 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 THAP3Q8WTV1 239 aaPredicted RBP6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 MAGEB10Q96LZ2 347 aaPredicted RBP6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 TESK2Q96S53 571 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 RBM15Q96T37 977 aaKnown RBP eCLIP6.88□□□□□ -1.314e-8■□□□□ 10.5
CSNK1A1-211ENST00000606826 GPR20Q99678 358 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 KRTAP9-3Q9BYQ3 159 aa6.88□□□□□ -1.31
CSNK1A1-211ENST00000606826 KIF20BQ96Q89 1820 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 LTN1O94822 1766 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 CD163L1Q9NR16 1453 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 OVOS2A0A0G2JMS6 1433 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 OVOS2A0A0J9YW53 1432 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 OVOS2Q6IE36 1432 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 RTL1A6NKG5 1358 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 NPEPPSL1A6NEC2 478 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 H0Y858 1186 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 KLHL18O94889 574 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 RASGRP1O95267 797 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 PKN3Q6P5Z2 889 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 GPR155Q7Z3F1 870 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 ARHGEF25Q86VW2 580 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 SREK1Q8WXA9 508 aaKnown RBP6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 OSBPL2Q9H1P3 480 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 SLC12A5Q9H2X9 1139 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 USP35Q9P2H5 1018 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 ADAM29Q9UKF5 820 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 PTCH2Q9Y6C5 1203 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 WNK3Q9BYP7 1800 aa6.87□□□□□ -1.31
CSNK1A1-211ENST00000606826 KIF24Q5T7B8 1368 aa6.86□□□□□ -1.31
CSNK1A1-211ENST00000606826 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms