RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 STK33Q9BYT3 514 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 COG5Q9UP83 839 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 L3MBTL1Q9Y468 752 aa16.5■□□□□ 0.23
LYSMD4-211ENST00000604213 SBF2Q86WG5 1849 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 MEIS1O00470 390 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 CLIC2O15247 247 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 PHF2O75151 1096 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 KCNJ2P63252 427 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 SPIRE1Q08AE8 756 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 DRAP1Q14919 205 aaPredicted RBP16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 GALNTL6Q49A17 601 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 PRELID2Q8N945 189 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 MARCH10Q8NA82 808 aaPredicted RBP16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 AGAP11Q8TF27 550 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 GPR101Q96P66 508 aaPredicted RBP16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 GPR88Q9GZN0 384 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 BCAS3Q9H6U6 928 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 TAS2R14Q9NYV8 317 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 TMOD4Q9NZQ9 345 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 PCDHB13Q9Y5F0 798 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 PCDHA3Q9Y5H8 950 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 WNK3Q9BYP7 1800 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 CYP3A7-CYP3A51PA0A087WV96 503 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 KRT13P13646 458 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 AKR1B1P15121 316 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 CYP3A7P24462 503 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 SLCO1A2P46721 670 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 KCNA1Q09470 495 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 AUHQ13825 339 aaKnown RBP16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 DDB1Q16531 1140 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 THOC1Q96FV9 657 aaKnown RBP16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 MBOAT7Q96N66 472 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 THAP2Q9H0W7 228 aa16.49■□□□□ 0.23
LYSMD4-211ENST00000604213 RSPH10B2B2RC85 870 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP17L15C9J2P7 530 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP17L10C9JJH3 530 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP17L13C9JLJ4 530 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP17L11C9JVI0 530 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP17L18D6R9N7 530 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP17L22D6RA61 530 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP17L17D6RBQ6 530 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP17L19D6RCP7 530 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP17L20D6RJB6 530 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 RIPK2O43353 540 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 RSPH10BP0C881 870 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 SPATA31C1P0DKV0 1188 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 PLCG2P16885 1265 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 FGFR4P22455 802 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 CHRNA3P32297 505 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 SLC16A2P36021 539 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 PDE6CP51160 858 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP17L24Q0WX57 530 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP17L6PQ6QN14 398 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 ZNF804AQ7Z570 1209 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 SETDB2Q96T68 719 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 STMN4Q9H169 189 aaPredicted RBP16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 PCYOX1Q9UHG3 505 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 DBR1Q9UK59 544 aaKnown RBP16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 DNAJC12Q9UKB3 198 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 DNM3Q9UQ16 869 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 MYO3BQ8WXR4 1341 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 FAM170AA1A519 330 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 RASGRF2O14827 1237 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 ZBTB5O15062 677 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 RGL2O15211 777 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 NEBLO76041 1014 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 GBP1P32455 592 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 ALDH5A1P51649 535 aaPredicted RBP16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 TTC27Q6P3X3 843 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 FMNL3Q8IVF7 1028 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 SLFN12Q8IYM2 578 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 ZDHHC14Q8IZN3 488 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 TRIM6Q9C030 488 aaPredicted RBP16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 ECT2Q9H8V3 914 aa16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 MTRF1LQ9UGC7 380 aaKnown RBP16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 RTCBQ9Y3I0 505 aaKnown RBP16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 USP15Q9Y4E8 981 aaPredicted RBP16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
LYSMD4-211ENST00000604213 SPATA31A1Q5TZJ5 1347 aa16.47■□□□□ 0.23
LYSMD4-211ENST00000604213 TNRC6CQ9HCJ0 1690 aaKnown RBP16.47■□□□□ 0.23
LYSMD4-211ENST00000604213 TGFB1I1O43294 461 aa16.47■□□□□ 0.23
LYSMD4-211ENST00000604213 ALAS1P13196 640 aa16.47■□□□□ 0.23
LYSMD4-211ENST00000604213 CTNNA2P26232 953 aa16.47■□□□□ 0.23
LYSMD4-211ENST00000604213 MFSD5Q6N075 450 aa16.47■□□□□ 0.23
LYSMD4-211ENST00000604213 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
LYSMD4-211ENST00000604213 PALB2Q86YC2 1186 aa16.47■□□□□ 0.23
LYSMD4-211ENST00000604213 PARP2Q9UGN5 583 aa16.47■□□□□ 0.23
LYSMD4-211ENST00000604213 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
LYSMD4-211ENST00000604213 ALG6Q9Y672 507 aa16.47■□□□□ 0.23
LYSMD4-211ENST00000604213 ANKRD62A6NC57 917 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 PODXLO00592 558 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 HSPA6P17066 643 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 RPA1P27694 616 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 CCDC38Q502W7 563 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 EXOC3L1Q86VI1 746 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 ETNPPLQ8TBG4 499 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 TBC1D22AQ8WUA7 517 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 KRT35Q92764 455 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms