RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PCDHB6Q9Y5E3 794 aa12.86□□□□□ -0.35
CCDC12-209ENST00000604164 A0A0U1RQF3 1178 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 CARNS1A5YM72 827 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 RFXAPO00287 272 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 SRGAP2CP0DJJ0 459 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 SPATA31C1P0DKV0 1188 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 CCT6AP40227 531 aaKnown RBP12.85□□□□□ -0.35
CCDC12-209ENST00000604164 TOB1P50616 345 aaPredicted RBP12.85□□□□□ -0.35
CCDC12-209ENST00000604164 RAB27AP51159 221 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 GPM6BQ13491 265 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 CCDC85BQ15834 202 aaPredicted RBP12.85□□□□□ -0.35
CCDC12-209ENST00000604164 CSPP1Q1MSJ5 1256 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 AAK1Q2M2I8 961 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 KRT79Q5XKE5 535 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 ARL6IP4Q66PJ3 421 aaKnown RBP12.85□□□□□ -0.35
CCDC12-209ENST00000604164 KCTD17Q8N5Z5 321 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 C4orf32Q8N8J7 132 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
CCDC12-209ENST00000604164 MRPL38Q96DV4 380 aaKnown RBP12.85□□□□□ -0.35
CCDC12-209ENST00000604164 ZNF668Q96K58 619 aaPredicted RBP12.85□□□□□ -0.35
CCDC12-209ENST00000604164 TRAIPQ9BWF2 469 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 LMAN2LQ9H0V9 348 aa12.85□□□□□ -0.35
CCDC12-209ENST00000604164 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
CCDC12-209ENST00000604164 DAXXQ9UER7 740 aaPredicted RBP12.85□□□□□ -0.35
CCDC12-209ENST00000604164 ARHGEF35A5YM69 484 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 K7ELQ4 463 aaPredicted RBP12.84□□□□□ -0.35
CCDC12-209ENST00000604164 ZBTB39O15060 712 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 LPXNO60711 386 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 ERLIN2O94905 339 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 PDIA4P13667 645 aaKnown RBP12.84□□□□□ -0.35
CCDC12-209ENST00000604164 IBSPP21815 317 aaPredicted RBP12.84□□□□□ -0.35
CCDC12-209ENST00000604164 AXLP30530 894 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 SKIV2LQ15477 1246 aaKnown RBP12.84□□□□□ -0.35
CCDC12-209ENST00000604164 TIGD5Q53EQ6 642 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 SPOUT1Q5T280 376 aaKnown RBP12.84□□□□□ -0.35
CCDC12-209ENST00000604164 TWF2Q6IBS0 349 aaKnown RBP12.84□□□□□ -0.35
CCDC12-209ENST00000604164 ECHDC2Q86YB7 292 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 IGSF22Q8N9C0 903 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 RNF149Q8NC42 400 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 PIGOQ8TEQ8 1089 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 ATXN2LQ8WWM7 1075 aaKnown RBP12.84□□□□□ -0.35
CCDC12-209ENST00000604164 P2RX5Q93086 422 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 TMEM117Q9H0C3 514 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 IFT122Q9HBG6 1241 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 THEGQ9P2T0 379 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 COG5Q9UP83 839 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 PIN4Q9Y237 131 aaKnown RBP12.84□□□□□ -0.35
CCDC12-209ENST00000604164 PCDHB12Q9Y5F1 795 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 MYO9BQ13459 2157 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 LOXHD1Q8IVV2 1947 aa12.84□□□□□ -0.35
CCDC12-209ENST00000604164 TBKBP1A7MCY6 615 aa12.83□□□□□ -0.36
CCDC12-209ENST00000604164 SLC26A4O43511 780 aa12.83□□□□□ -0.36
CCDC12-209ENST00000604164 USO1O60763 962 aaKnown RBP12.83□□□□□ -0.36
CCDC12-209ENST00000604164 MED24O75448 989 aa12.83□□□□□ -0.36
CCDC12-209ENST00000604164 ATP2C1P98194 919 aaPredicted RBP12.83□□□□□ -0.36
CCDC12-209ENST00000604164 NBR1Q14596 966 aa12.83□□□□□ -0.36
CCDC12-209ENST00000604164 PAN2Q504Q3 1202 aaKnown RBP12.83□□□□□ -0.36
CCDC12-209ENST00000604164 KSR1Q8IVT5 923 aa12.83□□□□□ -0.36
CCDC12-209ENST00000604164 SNX29Q8TEQ0 813 aa12.83□□□□□ -0.36
CCDC12-209ENST00000604164 SYMPKQ92797 1274 aaKnown RBP12.83□□□□□ -0.36
CCDC12-209ENST00000604164 SNX21Q969T3 373 aa12.83□□□□□ -0.36
CCDC12-209ENST00000604164 PGBD4Q96DM1 585 aa12.83□□□□□ -0.36
CCDC12-209ENST00000604164 MRPL9Q9BYD2 267 aaKnown RBP12.83□□□□□ -0.36
CCDC12-209ENST00000604164 NFKBIZQ9BYH8 718 aa12.83□□□□□ -0.36
CCDC12-209ENST00000604164 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
CCDC12-209ENST00000604164 AGPAT5Q9NUQ2 364 aa12.83□□□□□ -0.36
CCDC12-209ENST00000604164 DNM3Q9UQ16 869 aa12.83□□□□□ -0.36
CCDC12-209ENST00000604164 MRPL42Q9Y6G3 142 aaKnown RBP12.83□□□□□ -0.36
CCDC12-209ENST00000604164 VPS37CA5D8V6 355 aaPredicted RBP12.82□□□□□ -0.36
CCDC12-209ENST00000604164 NCK2O43639 380 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 CSDE1O75534 798 aaKnown RBP12.82□□□□□ -0.36
CCDC12-209ENST00000604164 LAG3P18627 525 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 FGFR4P22455 802 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 ARL2P36404 184 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 PTENP60484 403 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 MRPS5P82675 430 aaKnown RBP12.82□□□□□ -0.36
CCDC12-209ENST00000604164 PPP2R5AQ15172 486 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 POTEGQ6S5H5 508 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 SPRED2Q7Z698 418 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 IFNLR1Q8IU57 520 aaPredicted RBP12.82□□□□□ -0.36
CCDC12-209ENST00000604164 HSCBQ8IWL3 235 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 HACE1Q8IYU2 909 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 LRRC43Q8N309 656 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 RNF169Q8NCN4 708 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 CNNM3Q8NE01 707 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 PPP2R3CQ969Q6 453 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 CCDC51Q96ER9 411 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 AK8Q96MA6 479 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 NT5C3AQ9H0P0 336 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 POLR3FQ9H1D9 316 aaPredicted RBP12.82□□□□□ -0.36
CCDC12-209ENST00000604164 C2orf40Q9H1Z8 148 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 XPNPEP1Q9NQW7 623 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 RALGAPA2Q2PPJ7 1873 aa12.82□□□□□ -0.36
CCDC12-209ENST00000604164 INO80B-WBP1J3KQ70 363 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 ZNF623O75123 536 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 HSP90AA1P07900 732 aaKnown RBP12.81□□□□□ -0.36
CCDC12-209ENST00000604164 CYP11B2P19099 503 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 PPM1AP35813 382 aa12.81□□□□□ -0.36
CCDC12-209ENST00000604164 UBE3AQ05086 875 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms