RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 TTC12Q9H892 705 aaPredicted RBP18.31■□□□□ 0.52
TUBE1-206ENST00000603722 DACT1Q9NYF0 836 aa18.31■□□□□ 0.52
TUBE1-206ENST00000603722 PCDHA12Q9UN75 941 aa18.31■□□□□ 0.52
TUBE1-206ENST00000603722 PIN4Q9Y237 131 aaKnown RBP18.31■□□□□ 0.52
TUBE1-206ENST00000603722 PPME1Q9Y570 386 aa18.31■□□□□ 0.52
TUBE1-206ENST00000603722 COL4A3BPQ9Y5P4 624 aa18.31■□□□□ 0.52
TUBE1-206ENST00000603722 RALGAPA2Q2PPJ7 1873 aa18.31■□□□□ 0.52
TUBE1-206ENST00000603722 A0A0U1RQF3 1178 aa18.3■□□□□ 0.52
TUBE1-206ENST00000603722 ZBTB39O15060 712 aa18.3■□□□□ 0.52
TUBE1-206ENST00000603722 SLITRK3O94933 977 aa18.3■□□□□ 0.52
TUBE1-206ENST00000603722 LAG3P18627 525 aa18.3■□□□□ 0.52
TUBE1-206ENST00000603722 TXKP42681 527 aa18.3■□□□□ 0.52
TUBE1-206ENST00000603722 EMC2Q15006 297 aa18.3■□□□□ 0.52
TUBE1-206ENST00000603722 XKR9Q5GH70 373 aa18.3■□□□□ 0.52
TUBE1-206ENST00000603722 CLLU1OSQ5K130 101 aa18.3■□□□□ 0.52
TUBE1-206ENST00000603722 THNSL1Q8IYQ7 743 aa18.3■□□□□ 0.52
TUBE1-206ENST00000603722 PSPC1Q8WXF1 523 aaKnown RBP18.3■□□□□ 0.52
TUBE1-206ENST00000603722 ZSCAN31Q96LW9 406 aaPredicted RBP18.3■□□□□ 0.52
TUBE1-206ENST00000603722 INO80BQ9C086 356 aaPredicted RBP18.3■□□□□ 0.52
TUBE1-206ENST00000603722 PCDHGC5Q9Y5F6 944 aa18.3■□□□□ 0.52
TUBE1-206ENST00000603722 NCK2O43639 380 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 FGF18O76093 207 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 ATF7P17544 494 aaPredicted RBP18.29■□□□□ 0.52
TUBE1-206ENST00000603722 MCM7P33993 719 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 CTC1Q2NKJ3 1217 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 TWF2Q6IBS0 349 aaKnown RBP18.29■□□□□ 0.52
TUBE1-206ENST00000603722 LRRC55Q6ZSA7 311 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 CATSPER4Q7RTX7 472 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 ADGRD2Q7Z7M1 963 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 ZNF598Q86UK7 904 aaKnown RBP18.29■□□□□ 0.52
TUBE1-206ENST00000603722 EXOC8Q8IYI6 725 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 FAM184AQ8NB25 1140 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 PRPF31Q8WWY3 499 aaKnown RBP18.29■□□□□ 0.52
TUBE1-206ENST00000603722 PPP2R3CQ969Q6 453 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 MTMR9Q96QG7 549 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 TMEM60Q9H2L4 133 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 IFT122Q9HBG6 1241 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 CHST12Q9NRB3 414 aa18.29■□□□□ 0.52
TUBE1-206ENST00000603722 SH2B1Q9NRF2 756 aaPredicted RBP18.29■□□□□ 0.52
TUBE1-206ENST00000603722 LINC01565O15544 149 aa18.28■□□□□ 0.52
TUBE1-206ENST00000603722 SRGAP2CP0DJJ0 459 aa18.28■□□□□ 0.52
TUBE1-206ENST00000603722 LTBRP36941 435 aa18.28■□□□□ 0.52
TUBE1-206ENST00000603722 PBX3P40426 434 aa18.28■□□□□ 0.52
TUBE1-206ENST00000603722 HMGN5P82970 282 aaKnown RBP18.28■□□□□ 0.52
TUBE1-206ENST00000603722 UBE3AQ05086 875 aa18.28■□□□□ 0.52
TUBE1-206ENST00000603722 DLX2Q07687 328 aaPredicted RBP18.28■□□□□ 0.52
TUBE1-206ENST00000603722 LAMTOR4Q0VGL1 99 aa18.28■□□□□ 0.52
TUBE1-206ENST00000603722 CLUL1Q15846 466 aa18.28■□□□□ 0.52
TUBE1-206ENST00000603722 CSPP1Q1MSJ5 1256 aa18.28■□□□□ 0.52
TUBE1-206ENST00000603722 PUS10Q3MIT2 529 aaKnown RBP18.28■□□□□ 0.52
TUBE1-206ENST00000603722 HELQQ8TDG4 1101 aa18.28■□□□□ 0.52
TUBE1-206ENST00000603722 MTRQ99707 1265 aa18.28■□□□□ 0.52
TUBE1-206ENST00000603722 HSD17B14Q9BPX1 270 aa18.28■□□□□ 0.52
TUBE1-206ENST00000603722 GRXCR2A6NFK2 248 aa18.27■□□□□ 0.52
TUBE1-206ENST00000603722 POTEMA6NI47 508 aa18.27■□□□□ 0.52
TUBE1-206ENST00000603722 GAS2O43903 313 aaKnown RBP18.27■□□□□ 0.52
TUBE1-206ENST00000603722 TBX10O75333 385 aa18.27■□□□□ 0.52
TUBE1-206ENST00000603722 EOMESO95936 686 aa18.27■□□□□ 0.52
TUBE1-206ENST00000603722 PHKA2P46019 1235 aa18.27■□□□□ 0.52
TUBE1-206ENST00000603722 RBM25P49756 843 aaKnown RBP18.27■□□□□ 0.52
TUBE1-206ENST00000603722 LONRF3Q496Y0 759 aa18.27■□□□□ 0.52
TUBE1-206ENST00000603722 RBM23Q86U06 439 aaKnown RBP18.27■□□□□ 0.52
TUBE1-206ENST00000603722 MICAL1Q8TDZ2 1067 aa18.27■□□□□ 0.52
TUBE1-206ENST00000603722 TCP11Q8WWU5 503 aa18.27■□□□□ 0.52
TUBE1-206ENST00000603722 ZNF558Q96NG5 402 aa18.27■□□□□ 0.52
TUBE1-206ENST00000603722 TLR9Q9NR96 1032 aa18.27■□□□□ 0.52
TUBE1-206ENST00000603722 AGPAT5Q9NUQ2 364 aa18.27■□□□□ 0.52
TUBE1-206ENST00000603722 NLRC5Q86WI3 1866 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 LYPLA2O95372 231 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 NRIP1P48552 1158 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 NDUFV1P49821 464 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 GNL2Q13823 731 aaKnown RBP18.26■□□□□ 0.51
TUBE1-206ENST00000603722 KCNT2Q6UVM3 1135 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 FERMT3Q86UX7 667 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 RNF149Q8NC42 400 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 FBXO18Q8NFZ0 1043 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 LPPQ93052 612 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 CCDC43Q96MW1 224 aaKnown RBP18.26■□□□□ 0.51
TUBE1-206ENST00000603722 TRAIPQ9BWF2 469 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 FOXP1Q9H334 677 aaPredicted RBP18.26■□□□□ 0.51
TUBE1-206ENST00000603722 MINDY3Q9H8M7 445 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 XPNPEP1Q9NQW7 623 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 FAM105AQ9NUU6 356 aa18.26■□□□□ 0.51
TUBE1-206ENST00000603722 ERVFC1P60507 584 aa18.25■□□□□ 0.51
TUBE1-206ENST00000603722 PLCB3Q01970 1234 aa18.25■□□□□ 0.51
TUBE1-206ENST00000603722 ZNF174Q15697 407 aa18.25■□□□□ 0.51
TUBE1-206ENST00000603722 SRGAP1Q7Z6B7 1085 aa18.25■□□□□ 0.51
TUBE1-206ENST00000603722 FAM178BQ8IXR5 827 aa18.25■□□□□ 0.51
TUBE1-206ENST00000603722 PIGOQ8TEQ8 1089 aa18.25■□□□□ 0.51
TUBE1-206ENST00000603722 MRPL9Q9BYD2 267 aaKnown RBP18.25■□□□□ 0.51
TUBE1-206ENST00000603722 CD320Q9NPF0 282 aa18.25■□□□□ 0.51
TUBE1-206ENST00000603722 ANKEF1Q9NU02 776 aa18.25■□□□□ 0.51
TUBE1-206ENST00000603722 FAM50BQ9Y247 325 aa18.25■□□□□ 0.51
TUBE1-206ENST00000603722 MYH9P35579 1960 aaKnown RBP18.24■□□□□ 0.51
TUBE1-206ENST00000603722 A0A087WWV3 80 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 MEIS3P2A8K0S8 358 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 OR52Z1P0C646 297 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 SKIP12755 728 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 PPM1AP35813 382 aa18.24■□□□□ 0.51
TUBE1-206ENST00000603722 RARRES1P49788 294 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms