RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 SH2D3AQ9BRG2 576 aa10.5□□□□□ -0.73
SQSTM1P1-201ENST00000603451 UBE2OQ9C0C9 1292 aaKnown RBP10.5□□□□□ -0.73
SQSTM1P1-201ENST00000603451 POLR3FQ9H1D9 316 aaPredicted RBP10.5□□□□□ -0.73
SQSTM1P1-201ENST00000603451 KBTBD4Q9NVX7 518 aa10.5□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TET1Q8NFU7 2136 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TBCAO75347 108 aaKnown RBP10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 RPS6KA5O75582 802 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 FGBP02675 491 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 SSBP05455 408 aaKnown RBP eCLIP10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 SLFN14P0C7P3 912 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PFKFB1P16118 471 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 GLRA2P23416 452 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 AXLP30530 894 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 SMTNP53814 917 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PTENP60484 403 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 MDM2Q00987 491 aaPredicted RBP10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 DMP1Q13316 513 aaPredicted RBP10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 DRP2Q13474 957 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 CAPSQ13938 189 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 IKBKEQ14164 716 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 FAM187BQ17R55 369 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 SPECC1Q5M775 1068 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 RASIP1Q5U651 963 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 KANK3Q6NY19 840 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PPP4R3CPQ6ZMV5 832 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 GPBP1Q86WP2 473 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ZBTB8OSQ8IWT0 167 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 CEP57L1Q8IYX8 460 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TDHQ8IZJ6 230 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 RNF149Q8NC42 400 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 HERVK_113Q902F9 699 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TMEM143Q96AN5 459 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ZBTB10Q96DT7 871 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 CCDC51Q96ER9 411 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 NLRP4Q96MN2 994 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 SLC9A7Q96T83 725 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 OSMRQ99650 979 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 NTPCRQ9BSD7 190 aaKnown RBP10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 RUSC1Q9BVN2 902 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TRAIPQ9BWF2 469 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 IFT122Q9HBG6 1241 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PARVGQ9HBI0 331 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 CHST12Q9NRB3 414 aa10.49□□□□□ -0.73
SQSTM1P1-201ENST00000603451 A0A087WZ62 844 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 A0A087X0B3 334 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 GOLGA6L22H0YM25 854 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 POLR2DO15514 142 aaKnown RBP10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 HIP1RO75146 1068 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 MAPTP10636 758 aaKnown RBP10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 GHRP10912 638 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PLS3P13797 630 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 GAP43P17677 238 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 SYKP43405 635 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 FAM160A1Q05DH4 1040 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 NCBP1Q09161 790 aaKnown RBP10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 MAPK7Q13164 816 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ALCAMQ13740 583 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 MCM6Q14566 821 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 GPNMBQ14956 572 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TMEM240Q5SV17 173 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 FAM102BQ5T8I3 360 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 DAW1Q8N136 415 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PDILTQ8N807 584 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PHOSPHO2Q8TCD6 241 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TMEM40Q8WWA1 233 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 HVCN1Q96D96 273 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 VWCEQ96DN2 955 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 REEP2Q9BRK0 252 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 FDXACB1Q9BRP7 624 aaPredicted RBP10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ST6GALNAC4Q9H4F1 302 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ERVK-5Q9HDB9 667 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 OLFML3Q9NRN5 406 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 C1orf112Q9NSG2 853 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PRMT7Q9NVM4 692 aaPredicted RBP10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 DACT1Q9NYF0 836 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ARHGAP28Q9P2N2 729 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PADI3Q9ULW8 664 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ZMYM2Q9UBW7 1377 aa10.48□□□□□ -0.73
SQSTM1P1-201ENST00000603451 FRMD3A2A2Y4 597 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 LRRIQ4A6NIV6 560 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ERLIN2O94905 339 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 KRT18P05783 430 aaKnown RBP10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 SKIP12755 728 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 KCNJ6P48051 423 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 RAB27AP51159 221 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 UBE2HP62256 183 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TMEM62Q0P6H9 643 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 MAPK6Q16659 721 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ARSHQ5FYA8 562 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ZNF365Q70YC5 407 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 APBB1IPQ7Z5R6 666 aaPredicted RBP10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 DEFB128Q7Z7B8 93 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 FAM228AQ86W67 206 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ELOA2Q8IYF1 753 aaPredicted RBP10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 FSIP1Q8NA03 581 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 DBF4BQ8NFT6 615 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 DEPTORQ8TB45 409 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ASAP3Q8TDY4 903 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 LRRC15Q8TF66 581 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms