RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 TOP3AQ13472 1001 aaPredicted RBP3.98□□□□□ -1.77
SGMS1-207ENST00000602619 STAT4Q14765 748 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 EIF4HQ15056 248 aaKnown RBP3.98□□□□□ -1.77
SGMS1-207ENST00000602619 FNDC7Q5VTL7 733 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 PCSK4Q6UW60 755 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 TAX1BP1Q86VP1 789 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 PHYKPLQ8IUZ5 450 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 C1orf210Q8IVY1 113 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 BCL6BQ8N143 479 aaPredicted RBP3.98□□□□□ -1.77
SGMS1-207ENST00000602619 STPG3Q8N7X2 389 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 CALML6Q8TD86 181 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 LARP4BQ92615 738 aaKnown RBP3.98□□□□□ -1.77
SGMS1-207ENST00000602619 SLC5A5Q92911 643 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 USP7Q93009 1102 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 MAML3Q96JK9 1138 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 LRRC37BQ96QE4 947 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 FAM126AQ9BYI3 521 aaPredicted RBP3.98□□□□□ -1.77
SGMS1-207ENST00000602619 SLC4A7Q9Y6M7 1214 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 PHLDB1Q86UU1 1377 aa3.98□□□□□ -1.77
SGMS1-207ENST00000602619 PRAMEF22A3QJZ6 481 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 H0Y858 1186 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 ULK1O75385 1050 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 FBXO21O94952 628 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 CPEP16870 476 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 APEX1P27695 318 aaKnown RBP3.97□□□□□ -1.77
SGMS1-207ENST00000602619 POLD1P28340 1107 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 SESN3P58005 492 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 IL2P60568 153 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 ROM1Q03395 351 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 STRN3Q13033 797 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 MYBPC3Q14896 1274 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 SART3Q15020 963 aaKnown RBP3.97□□□□□ -1.77
SGMS1-207ENST00000602619 ATP13A4Q4VNC1 1196 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 TTC38Q5R3I4 469 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 RNF219Q5W0B1 726 aaPredicted RBP3.97□□□□□ -1.77
SGMS1-207ENST00000602619 LRSAM1Q6UWE0 723 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 Q6ZUG5 572 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 NECAB2Q7Z6G3 386 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 C11orf74Q86VG3 221 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 RASSF3Q86WH2 238 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 PASD1Q8IV76 773 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 FUKQ8N0W3 1084 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 UBR7Q8N806 425 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 HIPK4Q8NE63 616 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 IL17DQ8TAD2 202 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 GPR101Q96P66 508 aaPredicted RBP3.97□□□□□ -1.77
SGMS1-207ENST00000602619 TACO1Q9BSH4 297 aaKnown RBP3.97□□□□□ -1.77
SGMS1-207ENST00000602619 ZDHHC5Q9C0B5 715 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 WNT8AQ9H1J5 351 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 TOMM22Q9NS69 142 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 UCKL1Q9NWZ5 548 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 ATP8A1Q9Y2Q0 1164 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 DMRT1Q9Y5R6 373 aa3.97□□□□□ -1.77
SGMS1-207ENST00000602619 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.96□□□□□ -1.78
SGMS1-207ENST00000602619 ACO1P21399 889 aaKnown RBP3.96□□□□□ -1.78
SGMS1-207ENST00000602619 CSF2RBP32927 897 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 LSP1P33241 339 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 ID4P47928 161 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 GLRBP48167 497 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 RGS3P49796 1198 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 DDB1Q16531 1140 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 PHF19Q5T6S3 580 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 BROXQ5VW32 411 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 TRIM68Q6AZZ1 485 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 SLFN12LQ6IEE8 588 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 KIAA1841Q6NSI8 718 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 RALYLQ86SE5 291 aaKnown RBP3.96□□□□□ -1.78
SGMS1-207ENST00000602619 SPATS2Q86XZ4 545 aaKnown RBP3.96□□□□□ -1.78
SGMS1-207ENST00000602619 C7orf31Q8N865 590 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 CLRN3Q8NCR9 226 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 CACTINQ8WUQ7 758 aaKnown RBP3.96□□□□□ -1.78
SGMS1-207ENST00000602619 GPATCH3Q96I76 525 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 ZNF496Q96IT1 587 aaPredicted RBP3.96□□□□□ -1.78
SGMS1-207ENST00000602619 PLEKHG4BQ96PX9 1271 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 ORAI2Q96SN7 254 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 MMRN2Q9H8L6 949 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 PCDH12Q9NPG4 1184 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 MCM8Q9UJA3 840 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 DENND2AQ9ULE3 1009 aa3.96□□□□□ -1.78
SGMS1-207ENST00000602619 A0A0A6YYJ9 748 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 PFKMP08237 780 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 MANFP55145 182 aaKnown RBP3.95□□□□□ -1.78
SGMS1-207ENST00000602619 BCAR1P56945 870 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 ERVK-21P61565 698 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 SLC6A3Q01959 620 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 MAP3K12Q12852 859 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 FAPQ12884 760 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 CSRP2Q16527 193 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 PTPROQ16827 1216 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 CT47A1Q5JQC4 288 aaPredicted RBP3.95□□□□□ -1.78
SGMS1-207ENST00000602619 GRAMD4Q6IC98 578 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 LHFPL2Q6ZUX7 228 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 ZNF627Q7L945 461 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 BMP8AQ7Z5Y6 402 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 MRGPRGQ86SM5 289 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 DDX42Q86XP3 938 aaKnown RBP eCLIP3.95□□□□□ -1.78
SGMS1-207ENST00000602619 SLC41A1Q8IVJ1 513 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 PPP1R14CQ8TAE6 165 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 ZCRB1Q8TBF4 217 aaKnown RBP3.95□□□□□ -1.78
SGMS1-207ENST00000602619 RTF1Q92541 710 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms