RNA–Protein interactions for RNA: ENST00000602439.5

SFXN2-205, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-205ENST00000602439 NCK2O43639 380 aa16.36■□□□□ 0.21
SFXN2-205ENST00000602439 MUTP22033 750 aa16.36■□□□□ 0.21
SFXN2-205ENST00000602439 TECP42680 631 aa16.36■□□□□ 0.21
SFXN2-205ENST00000602439 NCBP1Q09161 790 aaKnown RBP16.36■□□□□ 0.21
SFXN2-205ENST00000602439 TFDP1Q14186 410 aa16.36■□□□□ 0.21
SFXN2-205ENST00000602439 PCBP1Q15365 356 aaKnown RBP eCLIP16.36■□□□□ 0.21
SFXN2-205ENST00000602439 MCTP1Q6DN14 999 aa16.36■□□□□ 0.21
SFXN2-205ENST00000602439 CATSPER4Q7RTX7 472 aa16.36■□□□□ 0.21
SFXN2-205ENST00000602439 TMEM117Q9H0C3 514 aa16.36■□□□□ 0.21
SFXN2-205ENST00000602439 TMEM60Q9H2L4 133 aa16.36■□□□□ 0.21
SFXN2-205ENST00000602439 SMC3Q9UQE7 1217 aa16.36■□□□□ 0.21
SFXN2-205ENST00000602439 MRPL42Q9Y6G3 142 aaKnown RBP16.36■□□□□ 0.21
SFXN2-205ENST00000602439 CHD7Q9P2D1 2997 aa16.35■□□□□ 0.21
SFXN2-205ENST00000602439 POTEMA6NI47 508 aa16.35■□□□□ 0.21
SFXN2-205ENST00000602439 RBAK-RBAKDNI3L0D1 243 aa16.35■□□□□ 0.21
SFXN2-205ENST00000602439 WNT7AO00755 349 aa16.35■□□□□ 0.21
SFXN2-205ENST00000602439 PHKA2P46019 1235 aa16.35■□□□□ 0.21
SFXN2-205ENST00000602439 RAB27AP51159 221 aa16.35■□□□□ 0.21
SFXN2-205ENST00000602439 TWF2Q6IBS0 349 aaKnown RBP16.35■□□□□ 0.21
SFXN2-205ENST00000602439 FERMT3Q86UX7 667 aa16.35■□□□□ 0.21
SFXN2-205ENST00000602439 ECHDC2Q86YB7 292 aa16.35■□□□□ 0.21
SFXN2-205ENST00000602439 PRPF31Q8WWY3 499 aaKnown RBP16.35■□□□□ 0.21
SFXN2-205ENST00000602439 TMEM143Q96AN5 459 aa16.35■□□□□ 0.21
SFXN2-205ENST00000602439 NACC1Q96RE7 527 aa16.35■□□□□ 0.21
SFXN2-205ENST00000602439 POLR3CQ9BUI4 534 aaPredicted RBP16.35■□□□□ 0.21
SFXN2-205ENST00000602439 COL25A1Q9BXS0 654 aaPredicted RBP16.35■□□□□ 0.21
SFXN2-205ENST00000602439 NSUN3Q9H649 340 aaKnown RBP16.35■□□□□ 0.21
SFXN2-205ENST00000602439 PIN4Q9Y237 131 aaKnown RBP16.35■□□□□ 0.21
SFXN2-205ENST00000602439 CARNS1A5YM72 827 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 SRGAP2CP0DJJ0 459 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 LAG3P18627 525 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 RPA1P27694 616 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 GJB2P29033 226 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 POU5F1BQ06416 359 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 LAMTOR4Q0VGL1 99 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 PDIA5Q14554 519 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 RILPL1Q5EBL4 403 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 FAM102BQ5T8I3 360 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 ZNF579Q8NAF0 562 aaKnown RBP16.34■□□□□ 0.21
SFXN2-205ENST00000602439 RNF169Q8NCN4 708 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 TRAIPQ9BWF2 469 aa16.34■□□□□ 0.21
SFXN2-205ENST00000602439 KIAA1671Q9BY89 1806 aa16.33■□□□□ 0.21
SFXN2-205ENST00000602439 ERLIN2O94905 339 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 FGFR4P22455 802 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 RARRES1P49788 294 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 FXR2P51116 673 aaKnown RBP eCLIP16.33■□□□□ 0.2
SFXN2-205ENST00000602439 UBE3AQ05086 875 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 CATSPER3Q86XQ3 398 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 KSR1Q8IVT5 923 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 LRRC43Q8N309 656 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 RNF149Q8NC42 400 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 MCPH1Q8NEM0 835 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 PGBD4Q96DM1 585 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 MRPL9Q9BYD2 267 aaKnown RBP16.33■□□□□ 0.2
SFXN2-205ENST00000602439 IFT122Q9HBG6 1241 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 BMP2KQ9NSY1 1161 aaPredicted RBP16.33■□□□□ 0.2
SFXN2-205ENST00000602439 DBR1Q9UK59 544 aaKnown RBP16.33■□□□□ 0.2
SFXN2-205ENST00000602439 PLAGL2Q9UPG8 496 aa16.33■□□□□ 0.2
SFXN2-205ENST00000602439 ZBTB39O15060 712 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 GRM6O15303 877 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 CSDE1O75534 798 aaKnown RBP16.32■□□□□ 0.2
SFXN2-205ENST00000602439 LINC00271P0C7V0 271 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 FGFR1P11362 822 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 AXLP30530 894 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 GATMP50440 423 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 PTGDRQ13258 359 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 KLHL23Q8NBE8 558 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 PIGOQ8TEQ8 1089 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 AGPAT5Q9NUQ2 364 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 TYW1Q9NV66 732 aaKnown RBP16.32■□□□□ 0.2
SFXN2-205ENST00000602439 LRWD1Q9UFC0 647 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 PUF60Q9UHX1 559 aaKnown RBP16.32■□□□□ 0.2
SFXN2-205ENST00000602439 TRANK1O15050 2925 aa16.32■□□□□ 0.2
SFXN2-205ENST00000602439 SPATA31C1P0DKV0 1188 aa16.31■□□□□ 0.2
SFXN2-205ENST00000602439 PDCP20941 246 aa16.31■□□□□ 0.2
SFXN2-205ENST00000602439 PPM1AP35813 382 aa16.31■□□□□ 0.2
SFXN2-205ENST00000602439 PRPHP41219 470 aa16.31■□□□□ 0.2
SFXN2-205ENST00000602439 LARP1BQ659C4 914 aaKnown RBP16.31■□□□□ 0.2
SFXN2-205ENST00000602439 PDE12Q6L8Q7 609 aaKnown RBP16.31■□□□□ 0.2
SFXN2-205ENST00000602439 DTHD1Q6ZMT9 781 aa16.31■□□□□ 0.2
SFXN2-205ENST00000602439 THNSL1Q8IYQ7 743 aa16.31■□□□□ 0.2
SFXN2-205ENST00000602439 CNNM3Q8NE01 707 aa16.31■□□□□ 0.2
SFXN2-205ENST00000602439 BACH2Q9BYV9 841 aa16.31■□□□□ 0.2
SFXN2-205ENST00000602439 UBE2ZQ9H832 354 aaPredicted RBP16.31■□□□□ 0.2
SFXN2-205ENST00000602439 ALG13Q9NP73 1137 aaKnown RBP16.31■□□□□ 0.2
SFXN2-205ENST00000602439 FAM105AQ9NUU6 356 aa16.31■□□□□ 0.2
SFXN2-205ENST00000602439 FSD2A1L4K1 749 aa16.3■□□□□ 0.2
SFXN2-205ENST00000602439 ARHGEF35A5YM69 484 aa16.3■□□□□ 0.2
SFXN2-205ENST00000602439 USO1O60763 962 aaKnown RBP16.3■□□□□ 0.2
SFXN2-205ENST00000602439 ZNF623O75123 536 aa16.3■□□□□ 0.2
SFXN2-205ENST00000602439 MED24O75448 989 aa16.3■□□□□ 0.2
SFXN2-205ENST00000602439 CD2BP2O95400 341 aaKnown RBP16.3■□□□□ 0.2
SFXN2-205ENST00000602439 ITGB1P05556 798 aa16.3■□□□□ 0.2
SFXN2-205ENST00000602439 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
SFXN2-205ENST00000602439 PTENP60484 403 aa16.3■□□□□ 0.2
SFXN2-205ENST00000602439 TFF2Q03403 129 aa16.3■□□□□ 0.2
SFXN2-205ENST00000602439 KRT17Q04695 432 aa16.3■□□□□ 0.2
SFXN2-205ENST00000602439 PUS10Q3MIT2 529 aaKnown RBP16.3■□□□□ 0.2
SFXN2-205ENST00000602439 TCEAL5Q5H9L2 206 aa16.3■□□□□ 0.2
SFXN2-205ENST00000602439 KRT79Q5XKE5 535 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms