RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 FOSL2P15408 326 aa10.66□□□□□ -0.7
LINC00649-212ENST00000601471 SFPQP23246 707 aaKnown RBP eCLIP10.66□□□□□ -0.7
LINC00649-212ENST00000601471 MXD4Q14582 209 aaPredicted RBP10.66□□□□□ -0.7
LINC00649-212ENST00000601471 PTPAQ15257 358 aa10.66□□□□□ -0.7
LINC00649-212ENST00000601471 PCBP1Q15365 356 aaKnown RBP eCLIP10.66□□□□□ -0.7
LINC00649-212ENST00000601471 FAM117BQ6P1L5 589 aa10.66□□□□□ -0.7
LINC00649-212ENST00000601471 HSCBQ8IWL3 235 aa10.66□□□□□ -0.7
LINC00649-212ENST00000601471 CMTR2Q8IYT2 770 aaKnown RBP10.66□□□□□ -0.7
LINC00649-212ENST00000601471 TMEM143Q96AN5 459 aa10.66□□□□□ -0.7
LINC00649-212ENST00000601471 ZNF668Q96K58 619 aaPredicted RBP10.66□□□□□ -0.7
LINC00649-212ENST00000601471 AK8Q96MA6 479 aa10.66□□□□□ -0.7
LINC00649-212ENST00000601471 SAMD11Q96NU1 681 aa10.66□□□□□ -0.7
LINC00649-212ENST00000601471 TGS1Q96RS0 853 aaKnown RBP10.66□□□□□ -0.7
LINC00649-212ENST00000601471 YME1L1Q96TA2 773 aa10.66□□□□□ -0.7
LINC00649-212ENST00000601471 ADAM2Q99965 735 aa10.66□□□□□ -0.7
LINC00649-212ENST00000601471 INO80BQ9C086 356 aaPredicted RBP10.66□□□□□ -0.7
LINC00649-212ENST00000601471 CHST12Q9NRB3 414 aa10.66□□□□□ -0.7
LINC00649-212ENST00000601471 AGPAT5Q9NUQ2 364 aa10.66□□□□□ -0.7
LINC00649-212ENST00000601471 A0A0U1RQF3 1178 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 DENND3A2RUS2 1198 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 C5orf67F2Z3F1 127 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 SLC26A4O43511 780 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 CSDE1O75534 798 aaKnown RBP10.65□□□□□ -0.7
LINC00649-212ENST00000601471 UPP2O95045 317 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 STAG3L1P0CL83 205 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 PDIA4P13667 645 aaKnown RBP10.65□□□□□ -0.7
LINC00649-212ENST00000601471 GLRA2P23416 452 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 CCT6AP40227 531 aaKnown RBP10.65□□□□□ -0.7
LINC00649-212ENST00000601471 PTENP60484 403 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 CAPSQ13938 189 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 CDCA2Q69YH5 1023 aaPredicted RBP10.65□□□□□ -0.7
LINC00649-212ENST00000601471 SRGAP1Q7Z6B7 1085 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 ZNF598Q86UK7 904 aaKnown RBP10.65□□□□□ -0.7
LINC00649-212ENST00000601471 MCPH1Q8NEM0 835 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 ASAP3Q8TDY4 903 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 SNX29Q8TEQ0 813 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 NLRP4Q96MN2 994 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 C17orf80Q9BSJ5 609 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 MINDY3Q9H8M7 445 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.7
LINC00649-212ENST00000601471 DDX19AQ9NUU7 478 aaKnown RBP10.65□□□□□ -0.7
LINC00649-212ENST00000601471 RNF216Q9NWF9 866 aaPredicted RBP10.65□□□□□ -0.7
LINC00649-212ENST00000601471 TMEM161AQ9NX61 479 aa10.65□□□□□ -0.7
LINC00649-212ENST00000601471 MYO9BQ13459 2157 aa10.65□□□□□ -0.71
LINC00649-212ENST00000601471 VWA3AA6NCI4 1184 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 USO1O60763 962 aaKnown RBP10.64□□□□□ -0.71
LINC00649-212ENST00000601471 ATF7P17544 494 aaPredicted RBP10.64□□□□□ -0.71
LINC00649-212ENST00000601471 CYP11B2P19099 503 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 FGFR4P22455 802 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 HOXA11P31270 313 aaPredicted RBP10.64□□□□□ -0.71
LINC00649-212ENST00000601471 PHKA2P46019 1235 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 MBTD1Q05BQ5 628 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 GRB10Q13322 594 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 SF3A1Q15459 793 aaKnown RBP10.64□□□□□ -0.71
LINC00649-212ENST00000601471 AMHR2Q16671 573 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 TMEM119Q4V9L6 283 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 EPC2Q52LR7 807 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 KRT79Q5XKE5 535 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 PADI6Q6TGC4 694 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 KCNK18Q7Z418 384 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 RNF149Q8NC42 400 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 MAFAQ8NHW3 353 aaPredicted RBP10.64□□□□□ -0.71
LINC00649-212ENST00000601471 ARNTL2Q8WYA1 636 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 SCLT1Q96NL6 688 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 PNMA5Q96PV4 448 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 BHMT2Q9H2M3 363 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 ZSCAN16Q9H4T2 348 aaPredicted RBP10.64□□□□□ -0.71
LINC00649-212ENST00000601471 GPRC5CQ9NQ84 441 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 RNF19AQ9NV58 838 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 DACT1Q9NYF0 836 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 LMCD1Q9NZU5 365 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 KIAA1024Q9UPX6 916 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 RWDD3Q9Y3V2 267 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 MTCH2Q9Y6C9 303 aa10.64□□□□□ -0.71
LINC00649-212ENST00000601471 PRRC2BQ5JSZ5 2229 aaKnown RBP10.64□□□□□ -0.71
LINC00649-212ENST00000601471 TRIOO75962 3097 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 A0A087WWV3 80 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 ARHGEF35A5YM69 484 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 TSPAN1O60635 241 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 ZNF623O75123 536 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 EYA4O95677 639 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 ZSCAN20P17040 1043 aaPredicted RBP10.63□□□□□ -0.71
LINC00649-212ENST00000601471 CDC25AP30304 524 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 LONP1P36776 959 aaKnown RBP10.63□□□□□ -0.71
LINC00649-212ENST00000601471 GRIN1Q05586 938 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 TFDP1Q14186 410 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 ECHDC2Q86YB7 292 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 TMEM192Q8IY95 271 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 FIBCD1Q8N539 461 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 LRRC15Q8TF66 581 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 RSPH1Q8WYR4 309 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 BSNDQ8WZ55 320 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 CCDC43Q96MW1 224 aaKnown RBP10.63□□□□□ -0.71
LINC00649-212ENST00000601471 GAS2L1Q99501 681 aaPredicted RBP10.63□□□□□ -0.71
LINC00649-212ENST00000601471 POLR3FQ9H1D9 316 aaPredicted RBP10.63□□□□□ -0.71
LINC00649-212ENST00000601471 CERS4Q9HA82 394 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 FOXD4L1Q9NU39 408 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 MRPL42Q9Y6G3 142 aaKnown RBP10.63□□□□□ -0.71
LINC00649-212ENST00000601471 TTC28Q96AY4 2481 aa10.63□□□□□ -0.71
LINC00649-212ENST00000601471 E9PMD0 336 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms