RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 FBXL18Q96ME1 805 aa20.24■□□□□ 0.83
CHMP2A-208ENST00000601220 SPG21Q9NZD8 308 aa20.24■□□□□ 0.83
CHMP2A-208ENST00000601220 SEPT9Q9UHD8 586 aaPredicted RBP20.24■□□□□ 0.83
CHMP2A-208ENST00000601220 A0A087WZ62 844 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 CPLX1O14810 134 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 PPM1AP35813 382 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 INF2Q27J81 1249 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 BMP8AQ7Z5Y6 402 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 ABI1Q8IZP0 508 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 FDXACB1Q9BRP7 624 aaPredicted RBP20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 GCOM2Q9BZD3 368 aaPredicted RBP20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 KCNH6Q9H252 994 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 KCNMB3Q9NPA1 279 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 DACT1Q9NYF0 836 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 DDX25Q9UHL0 483 aaKnown RBP20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 VAV3Q9UKW4 847 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 KCNJ14Q9UNX9 436 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 TRIOO75962 3097 aa20.23■□□□□ 0.83
CHMP2A-208ENST00000601220 TECTAO75443 2155 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 DDX11L8A8MPP1 907 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 TECP42680 631 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 PHKA2P46019 1235 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 ZXDAP98168 799 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 KRT17Q04695 432 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 STK3Q13188 491 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 NONOQ15233 471 aaKnown RBP eCLIP20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 TRIM67Q6ZTA4 783 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 ZNF410Q86VK4 478 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 MRPL43Q8N983 215 aaKnown RBP20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 RPGRIP1Q96KN7 1286 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 MFSD14AQ96MC6 490 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 SCLT1Q96NL6 688 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 PHF20Q9BVI0 1012 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 ENTPD7Q9NQZ7 604 aa20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 SUCLA2Q9P2R7 463 aaPredicted RBP20.22■□□□□ 0.83
CHMP2A-208ENST00000601220 WDR81Q562E7 1941 aa20.21■□□□□ 0.83
CHMP2A-208ENST00000601220 C2orf71A6NGG8 1288 aa20.21■□□□□ 0.83
CHMP2A-208ENST00000601220 PSMC5P62195 406 aa20.21■□□□□ 0.83
CHMP2A-208ENST00000601220 SCRN1Q12765 414 aa20.21■□□□□ 0.83
CHMP2A-208ENST00000601220 PPP2R5CQ13362 524 aa20.21■□□□□ 0.83
CHMP2A-208ENST00000601220 KRT25Q7Z3Z0 450 aa20.21■□□□□ 0.83
CHMP2A-208ENST00000601220 KSR1Q8IVT5 923 aa20.21■□□□□ 0.83
CHMP2A-208ENST00000601220 ZNF579Q8NAF0 562 aaKnown RBP20.21■□□□□ 0.83
CHMP2A-208ENST00000601220 IFT122Q9HBG6 1241 aa20.21■□□□□ 0.83
CHMP2A-208ENST00000601220 PDRG1Q9NUG6 133 aa20.21■□□□□ 0.83
CHMP2A-208ENST00000601220 WRAP73Q9P2S5 460 aaPredicted RBP20.21■□□□□ 0.83
CHMP2A-208ENST00000601220 MEIS3P2A8K0S8 358 aa20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 NT5C1B-RDH14C9J2C7 533 aa20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 DNM2P50570 870 aa20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 BCAR1P56945 870 aa20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 NHLH1Q02575 133 aa20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 PPP4R3AQ6IN85 833 aa20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 LLGL2Q6P1M3 1020 aa20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 TMC7Q7Z402 723 aa20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 TMEM173Q86WV6 379 aaPredicted RBP20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 RHPN2Q8IUC4 686 aa20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 HAS1Q92839 578 aa20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 PIEZO1Q92508 2521 aa20.2■□□□□ 0.82
CHMP2A-208ENST00000601220 TMEM221A6NGB7 291 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 M0R296 226 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 CLASP2O75122 1294 aaKnown RBP20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 ZNF623O75123 536 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 HOXB8P17481 243 aaPredicted RBP20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 SFPQP23246 707 aaKnown RBP eCLIP20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 NPEPPSP55786 919 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 LETM2Q2VYF4 491 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 PLA2G4FQ68DD2 849 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 ALYREFQ86V81 257 aaKnown RBP20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 OXER1Q8TDS5 423 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 LPPQ93052 612 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 FAM20AQ96MK3 541 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 MRPL9Q9BYD2 267 aaKnown RBP20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 CYP26B1Q9NR63 512 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 GJB4Q9NTQ9 266 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 HCFC2Q9Y5Z7 792 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 ZNF318Q5VUA4 2279 aa20.19■□□□□ 0.82
CHMP2A-208ENST00000601220 DTNBO60941 627 aa20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 OFD1O75665 1012 aa20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 SRGAP2BP0DMP2 458 aa20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 QARSP47897 775 aaKnown RBP20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 SMC1AQ14683 1233 aaKnown RBP20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 EARS2Q5JPH6 523 aaKnown RBP20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 CPLX2Q6PUV4 134 aaKnown RBP20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 APOL5Q9BWW9 433 aa20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 INO80BQ9C086 356 aaPredicted RBP20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 DHX33Q9H6R0 707 aaKnown RBP20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 FAM105AQ9NUU6 356 aa20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 CDH22Q9UJ99 828 aa20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 TPCN1Q9ULQ1 816 aa20.18■□□□□ 0.82
CHMP2A-208ENST00000601220 PFKFB2O60825 505 aa20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 CTDNEP1O95476 244 aa20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 ALDH7A1P49419 539 aaKnown RBP20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 LONRF3Q496Y0 759 aa20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 TWF2Q6IBS0 349 aaKnown RBP20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 NEK8Q86SG6 692 aa20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 BCL7CQ8WUZ0 217 aaPredicted RBP20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 RSPH1Q8WYR4 309 aa20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 CASP10Q92851 521 aa20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 ASIC4Q96FT7 647 aa20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 ZBP1Q9H171 429 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms