RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 DNAJC3Q13217 504 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 RASGEF1CQ8N431 466 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 ZCRB1Q8TBF4 217 aaKnown RBP17.34■□□□□ 0.37
SYDE1-204ENST00000600440 CTNNBL1Q8WYA6 563 aaPredicted RBP17.34■□□□□ 0.37
SYDE1-204ENST00000600440 RAD54LQ92698 747 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 PCMTD2Q9NV79 361 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 WDR35Q9P2L0 1181 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 SCOCQ9UIL1 159 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 GNAZP19086 355 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 ANKLE1Q8NAG6 615 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 SLC44A5Q8NCS7 719 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 TXLNGQ9NUQ3 528 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 NKIRAS1Q9NYS0 192 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 LMCD1Q9NZU5 365 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 E9PMD0 336 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 CETN3O15182 167 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 SPAG7O75391 227 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 ZCCHC18P0CG32 403 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 SCNN1BP51168 640 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 BICDL1Q6ZP65 573 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 NBPF5PQ86XG9 351 aaPredicted RBP17.34■□□□□ 0.37
SYDE1-204ENST00000600440 KIFAP3Q92845 792 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 HES6Q96HZ4 224 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 PWWP2AQ96N64 755 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.34■□□□□ 0.37
SYDE1-204ENST00000600440 BMP2KQ9NSY1 1161 aaPredicted RBP17.34■□□□□ 0.37
SYDE1-204ENST00000600440 BARHL2Q9NY43 387 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 GRHL1Q9NZI5 618 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 ANKIB1Q9P2G1 1089 aa17.34■□□□□ 0.37
SYDE1-204ENST00000600440 KCNA3P22001 575 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 CNGA1P29973 690 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 TNNI2P48788 182 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 TRIM28Q13263 835 aaKnown RBP17.33■□□□□ 0.37
SYDE1-204ENST00000600440 ECM1Q16610 540 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 RASIP1Q5U651 963 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 CCDC137Q6PK04 289 aaKnown RBP17.33■□□□□ 0.37
SYDE1-204ENST00000600440 VSTM1Q6UX27 236 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 TRIM74Q86UV6 250 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 TRIM73Q86UV7 250 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 SEC14L1Q92503 715 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 TBC1D10AQ9BXI6 508 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 NT5C3AQ9H0P0 336 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 SUGT1Q9Y2Z0 365 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 LRRC42Q9Y546 428 aa17.33■□□□□ 0.37
SYDE1-204ENST00000600440 A0A1W2PRG0 241 aa17.33■□□□□ 0.36
SYDE1-204ENST00000600440 M0R2N6 131 aa17.33■□□□□ 0.36
SYDE1-204ENST00000600440 SMAPO00193 183 aa17.33■□□□□ 0.36
SYDE1-204ENST00000600440 NVLO15381 856 aaKnown RBP17.33■□□□□ 0.36
SYDE1-204ENST00000600440 CGB2Q6NT52 195 aa17.33■□□□□ 0.36
SYDE1-204ENST00000600440 LRRC8CQ8TDW0 803 aa17.33■□□□□ 0.36
SYDE1-204ENST00000600440 ARHGEF26Q96DR7 871 aa17.33■□□□□ 0.36
SYDE1-204ENST00000600440 LRRC37BQ96QE4 947 aa17.33■□□□□ 0.36
SYDE1-204ENST00000600440 NAP1L3Q99457 506 aaPredicted RBP17.33■□□□□ 0.36
SYDE1-204ENST00000600440 UBE2OQ9C0C9 1292 aaKnown RBP17.33■□□□□ 0.36
SYDE1-204ENST00000600440 CDC42EP4Q9H3Q1 356 aaKnown RBP17.33■□□□□ 0.36
SYDE1-204ENST00000600440 SLCO1B3Q9NPD5 702 aa17.33■□□□□ 0.36
SYDE1-204ENST00000600440 ABCB11O95342 1321 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 KLRF2D3W0D1 207 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 AFPP02771 609 aaKnown RBP17.32■□□□□ 0.36
SYDE1-204ENST00000600440 RBM26Q5T8P6 1007 aaKnown RBP17.32■□□□□ 0.36
SYDE1-204ENST00000600440 KRT25Q7Z3Z0 450 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 SYCP3Q8IZU3 236 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 KRT35Q92764 455 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 NMRK1Q9NWW6 199 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 STXBP5LQ9Y2K9 1186 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 PCDHB13Q9Y5F0 798 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 USH1CQ9Y6N9 552 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 GJB6O95452 261 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 ZBTB48P10074 688 aaPredicted RBP17.32■□□□□ 0.36
SYDE1-204ENST00000600440 CALCOCO2Q13137 446 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 CTTNQ14247 550 aaKnown RBP17.32■□□□□ 0.36
SYDE1-204ENST00000600440 KYNUQ16719 465 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 ZC2HC1CQ53FD0 456 aaPredicted RBP17.32■□□□□ 0.36
SYDE1-204ENST00000600440 TTC27Q6P3X3 843 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 GBP5Q96PP8 586 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 DENND2DQ9H6A0 471 aaPredicted RBP17.32■□□□□ 0.36
SYDE1-204ENST00000600440 CCDC134Q9H6E4 229 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 PICK1Q9NRD5 415 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 GCNT4Q9P109 453 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 TCRBV7S2A1N4TA0A589 114 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 CLIC2O15247 247 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 ATP9AO75110 1047 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 ETS2P15036 469 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 PON1P27169 355 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 CHRNDQ07001 517 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 ARHGAP44Q17R89 818 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 USP17L2Q6R6M4 530 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 MTHFD1LQ6UB35 978 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 PRUNE1Q86TP1 453 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 PROM2Q8N271 834 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 OCEL1Q9H607 264 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 C6orf50Q9HD87 102 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 DCP1AQ9NPI6 582 aaPredicted RBP17.32■□□□□ 0.36
SYDE1-204ENST00000600440 EMILIN3Q9NT22 766 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 USP40Q9NVE5 1235 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 MAD2L2Q9UI95 211 aa17.32■□□□□ 0.36
SYDE1-204ENST00000600440 NIP7Q9Y221 180 aaKnown RBP eCLIP17.32■□□□□ 0.36
SYDE1-204ENST00000600440 TNS3Q68CZ2 1445 aa17.31■□□□□ 0.36
SYDE1-204ENST00000600440 KIF1AQ12756 1690 aa17.31■□□□□ 0.36
SYDE1-204ENST00000600440 BHMG1C9JSJ3 638 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms