RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 CCDC65Q8IXS2 484 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 RNF149Q8NC42 400 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 DEPTORQ8TB45 409 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 WNT8BQ93098 351 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 C2orf40Q9H1Z8 148 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 GOLPH3LQ9H4A5 285 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 KBTBD4Q9NVX7 518 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 PHLPP2Q6ZVD8 1323 aa18.47■□□□□ 0.55
USHBP1-210ENST00000600286 LRRIQ4A6NIV6 560 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 CCDC169A6NNP5 214 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 H0YCG3 227 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 GPR182O15218 404 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 GADD45BO75293 160 aaPredicted RBP18.46■□□□□ 0.55
USHBP1-210ENST00000600286 CHRNA1P02708 482 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 PFKMP08237 780 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 IDEP14735 1019 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 PTMSP20962 102 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 ABCD1P33897 745 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 NAMPTP43490 491 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 AFMP43652 599 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 DRP2Q13474 957 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 ARSHQ5FYA8 562 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 KRBA2Q6ZNG9 492 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 SRGAP1Q7Z6B7 1085 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 MYCT1Q8N699 235 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 SLC17A8Q8NDX2 589 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 BADQ92934 168 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 SCLYQ96I15 445 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 PPP1R16BQ96T49 567 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 PARVGQ9HBI0 331 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 GPRC5CQ9NQ84 441 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 TCHHQ07283 1943 aa18.46■□□□□ 0.55
USHBP1-210ENST00000600286 A0A087WZ62 844 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 MYMKA6NI61 221 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 GPR32O75388 356 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 RPS6KA5O75582 802 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 ACTN1P12814 892 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 PLS3P13797 630 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 GAP43P17677 238 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 SCP2P22307 547 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 SFPQP23246 707 aaKnown RBP eCLIP18.45■□□□□ 0.54
USHBP1-210ENST00000600286 GLRA2P23416 452 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 EIF4BP23588 611 aaKnown RBP18.45■□□□□ 0.54
USHBP1-210ENST00000600286 ASIC1P78348 528 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 GIT2Q14161 759 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 FMR1NBQ8N0W7 255 aaPredicted RBP18.45■□□□□ 0.54
USHBP1-210ENST00000600286 SEPT8Q92599 483 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 TIGD1Q96MW7 591 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 OSMRQ99650 979 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 C7orf25Q9BPX7 421 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 REEP2Q9BRK0 252 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 FDXACB1Q9BRP7 624 aaPredicted RBP18.45■□□□□ 0.54
USHBP1-210ENST00000600286 ADAMTS10Q9H324 1103 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 SEL1LQ9UBV2 794 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 WDR81Q562E7 1941 aa18.45■□□□□ 0.54
USHBP1-210ENST00000600286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.44■□□□□ 0.54
USHBP1-210ENST00000600286 NPHP3-ACAD11A0A0J9YXS1 232 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 ACTN4O43707 911 aaKnown RBP18.44■□□□□ 0.54
USHBP1-210ENST00000600286 DARSP14868 501 aaKnown RBP18.44■□□□□ 0.54
USHBP1-210ENST00000600286 EFNA5P52803 228 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 PEX3P56589 373 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 MGAT3Q09327 533 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 PAK2Q13177 524 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 PCBP1Q15365 356 aaKnown RBP eCLIP18.44■□□□□ 0.54
USHBP1-210ENST00000600286 TSHZ1Q6ZSZ6 1077 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 DEFB128Q7Z7B8 93 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 KSR1Q8IVT5 923 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 ASAP3Q8TDY4 903 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 LRRC15Q8TF66 581 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 STAMQ92783 540 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 APBB2Q92870 758 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 PAGE5Q96GU1 130 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 LRCH3Q96II8 777 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 TRIM9Q9C026 710 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 WNT8AQ9H1J5 351 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 POLD4Q9HCU8 107 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 IL23AQ9NPF7 189 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 KMT5AQ9NQR1 393 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 UMODL1Q5DID0 1318 aa18.44■□□□□ 0.54
USHBP1-210ENST00000600286 SFI1A8K8P3 1242 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 GTPBP6O43824 516 aaPredicted RBP18.43■□□□□ 0.54
USHBP1-210ENST00000600286 GHRP10912 638 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 CSF2RAP15509 400 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 PTENP60484 403 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 CACNB1Q02641 598 aaPredicted RBP18.43■□□□□ 0.54
USHBP1-210ENST00000600286 CAPSQ13938 189 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 LRIT3Q3SXY7 679 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 HERC4Q5GLZ8 1057 aaPredicted RBP18.43■□□□□ 0.54
USHBP1-210ENST00000600286 FBXO47Q5MNV8 452 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 CATSPER4Q7RTX7 472 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 ENGASEQ8NFI3 743 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 SPIRE2Q8WWL2 714 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 ZNF668Q96K58 619 aaPredicted RBP18.43■□□□□ 0.54
USHBP1-210ENST00000600286 NFKBIZQ9BYH8 718 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 MTIF3Q9H2K0 278 aaKnown RBP18.43■□□□□ 0.54
USHBP1-210ENST00000600286 LMBRD1Q9NUN5 540 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 PANK4Q9NVE7 773 aa18.43■□□□□ 0.54
USHBP1-210ENST00000600286 PVALEFA0A1B0GWK0 134 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 INO80B-WBP1J3KQ70 363 aa18.42■□□□□ 0.54
USHBP1-210ENST00000600286 K7ERI5 159 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms