RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 MYO7AQ13402 2215 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 FSD2A1L4K1 749 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 FAM205CA6NFA0 338 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 JAK2O60674 1132 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 FGFR4P22455 802 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 YWHABP31946 246 aaKnown RBP17.68■□□□□ 0.42
VRK3-221ENST00000600284 POLGP54098 1239 aaPredicted RBP17.68■□□□□ 0.42
VRK3-221ENST00000600284 NPEPPSP55786 919 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 PLCB3Q01970 1234 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 PLA2G4FQ68DD2 849 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 NCAPH2Q6IBW4 605 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 THNSL1Q8IYQ7 743 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 GJD3Q8N144 294 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 LRRC43Q8N309 656 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 EFHBQ8N7U6 833 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 LLPHQ9BRT6 129 aaKnown RBP17.68■□□□□ 0.42
VRK3-221ENST00000600284 IGFLR1Q9H665 355 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 TLR9Q9NR96 1032 aa17.68■□□□□ 0.42
VRK3-221ENST00000600284 WRAP73Q9P2S5 460 aaPredicted RBP17.68■□□□□ 0.42
VRK3-221ENST00000600284 PUF60Q9UHX1 559 aaKnown RBP17.68■□□□□ 0.42
VRK3-221ENST00000600284 ASAP2O43150 1006 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 CSDE1O75534 798 aaKnown RBP17.67■□□□□ 0.42
VRK3-221ENST00000600284 SLITRK3O94933 977 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 LYPLA2O95372 231 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 IRS1P35568 1242 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 PPM1AP35813 382 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 CALCRLQ16602 461 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 LRRC55Q6ZSA7 311 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 SRGAP1Q7Z6B7 1085 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 TCP11Q8WWU5 503 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 DYDC2Q96IM9 177 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 CDCA3Q99618 268 aaPredicted RBP17.67■□□□□ 0.42
VRK3-221ENST00000600284 HSD17B14Q9BPX1 270 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 MRPL9Q9BYD2 267 aaKnown RBP17.67■□□□□ 0.42
VRK3-221ENST00000600284 IFT122Q9HBG6 1241 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 RGL1Q9NZL6 768 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 COL4A3BPQ9Y5P4 624 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 KIAA1671Q9BY89 1806 aa17.67■□□□□ 0.42
VRK3-221ENST00000600284 CARNS1A5YM72 827 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 ZNF623O75123 536 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 GTF2F1P35269 517 aaKnown RBP eCLIP17.66■□□□□ 0.42
VRK3-221ENST00000600284 PHKA2P46019 1235 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 RAB27AP51159 221 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 ST3GAL1Q11201 340 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 SAFBQ15424 915 aaKnown RBP eCLIP17.66■□□□□ 0.42
VRK3-221ENST00000600284 CLLU1OSQ5K130 101 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 KCNT2Q6UVM3 1135 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 ZNF579Q8NAF0 562 aaKnown RBP17.66■□□□□ 0.42
VRK3-221ENST00000600284 MICAL1Q8TDZ2 1067 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 PRPF31Q8WWY3 499 aaKnown RBP17.66■□□□□ 0.42
VRK3-221ENST00000600284 PSPC1Q8WXF1 523 aaKnown RBP17.66■□□□□ 0.42
VRK3-221ENST00000600284 MRPS27Q92552 414 aaKnown RBP17.66■□□□□ 0.42
VRK3-221ENST00000600284 ZSCAN31Q96LW9 406 aaPredicted RBP17.66■□□□□ 0.42
VRK3-221ENST00000600284 NLRP4Q96MN2 994 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 ZNF558Q96NG5 402 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 MTMR9Q96QG7 549 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 EIF2AK1Q9BQI3 630 aaKnown RBP17.66■□□□□ 0.42
VRK3-221ENST00000600284 TTC12Q9H892 705 aaPredicted RBP17.66■□□□□ 0.42
VRK3-221ENST00000600284 CD320Q9NPF0 282 aa17.66■□□□□ 0.42
VRK3-221ENST00000600284 ATG2AQ2TAZ0 1938 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 PI4K2BG5E9Z4 385 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 FSCN2O14926 492 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 NEMFO60524 1076 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 CSPG5O95196 566 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 ATF7P17544 494 aaPredicted RBP17.65■□□□□ 0.42
VRK3-221ENST00000600284 KRT17Q04695 432 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 DLX2Q07687 328 aaPredicted RBP17.65■□□□□ 0.42
VRK3-221ENST00000600284 CTTNQ14247 550 aaKnown RBP17.65■□□□□ 0.42
VRK3-221ENST00000600284 PCBP1Q15365 356 aaKnown RBP eCLIP17.65■□□□□ 0.42
VRK3-221ENST00000600284 SMAD2Q15796 467 aaKnown RBP17.65■□□□□ 0.42
VRK3-221ENST00000600284 XKR9Q5GH70 373 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 TWF2Q6IBS0 349 aaKnown RBP17.65■□□□□ 0.42
VRK3-221ENST00000600284 CATSPER4Q7RTX7 472 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 ADGRD2Q7Z7M1 963 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 KSR1Q8IVT5 923 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 TPH2Q8IWU9 490 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 RNF169Q8NCN4 708 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 MSLNLQ96KJ4 702 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 TLE6Q9H808 572 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 ANKEF1Q9NU02 776 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 HCSTQ9UBK5 93 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 CD207Q9UJ71 328 aa17.65■□□□□ 0.42
VRK3-221ENST00000600284 PIN4Q9Y237 131 aaKnown RBP17.65■□□□□ 0.42
VRK3-221ENST00000600284 LINC01565O15544 149 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 MBTPS2O43462 519 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 TBX10O75333 385 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 EYA4O95677 639 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 XRCC6P12956 609 aaKnown RBP eCLIP17.64■□□□□ 0.41
VRK3-221ENST00000600284 SSTR3P32745 418 aaPredicted RBP17.64■□□□□ 0.41
VRK3-221ENST00000600284 NRIP1P48552 1158 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 NDUFV1P49821 464 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 ERVFC1P60507 584 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 CYP4A11Q02928 519 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 LAMTOR4Q0VGL1 99 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 SMAD4Q13485 552 aaKnown RBP17.64■□□□□ 0.41
VRK3-221ENST00000600284 EMC2Q15006 297 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 ADHFE1Q8IWW8 467 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 HELQQ8TDG4 1101 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 TMEM143Q96AN5 459 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 MTRQ99707 1265 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms