RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 PCDHB13Q9Y5F0 798 aa16.67■□□□□ 0.26
VRK3-218ENST00000600031 ZBTB42B2RXF5 422 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 PDXKO00764 312 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 SLC16A4O15374 487 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 ARHGAP6O43182 974 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 FGFR1OPO95684 399 aaKnown RBP16.66■□□□□ 0.26
VRK3-218ENST00000600031 NPTX2P47972 431 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 SLC26A2P50443 739 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 SP3Q02447 781 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 GABPB1Q06547 395 aaPredicted RBP16.66■□□□□ 0.26
VRK3-218ENST00000600031 EDRF1Q3B7T1 1238 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 PPP4R3CPQ6ZMV5 832 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 STXBP4Q6ZWJ1 553 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 FAM114A1Q8IWE2 563 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 ANKRD20A12PQ8NF67 263 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 TMEM143Q96AN5 459 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 LENG1Q96BZ8 264 aaPredicted RBP16.66■□□□□ 0.26
VRK3-218ENST00000600031 POLR3FQ9H1D9 316 aaPredicted RBP16.66■□□□□ 0.26
VRK3-218ENST00000600031 RNPEPQ9H4A4 650 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 TYW1Q9NV66 732 aaKnown RBP16.66■□□□□ 0.26
VRK3-218ENST00000600031 RNF186Q9NXI6 227 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 GNEQ9Y223 722 aaKnown RBP16.66■□□□□ 0.26
VRK3-218ENST00000600031 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.66■□□□□ 0.26
VRK3-218ENST00000600031 UBE4BO95155 1302 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 XRCC5P13010 732 aaKnown RBP16.66■□□□□ 0.26
VRK3-218ENST00000600031 MAP2K2P36507 400 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 FLT3LGP49771 235 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 NCKAP1LP55160 1127 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 HAUS6Q7Z4H7 955 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 ZC3H3Q8IXZ2 948 aaKnown RBP16.66■□□□□ 0.26
VRK3-218ENST00000600031 SLC7A3Q8WY07 619 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 KIFC3Q9BVG8 833 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 ERAP1Q9NZ08 941 aa16.66■□□□□ 0.26
VRK3-218ENST00000600031 GOLGA6L9A6NEM1 432 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 CCDC169A6NNP5 214 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 N4BP3O15049 544 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 DYNC1LI2O43237 492 aaPredicted RBP16.65■□□□□ 0.26
VRK3-218ENST00000600031 CALUO43852 315 aaPredicted RBP16.65■□□□□ 0.26
VRK3-218ENST00000600031 PPFIA4O75335 1185 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 MMP3P08254 477 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 ZNF286BP0CG31 522 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 RFC5P40937 340 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 PRKCZQ05513 592 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 TBX2Q13207 712 aaPredicted RBP16.65■□□□□ 0.26
VRK3-218ENST00000600031 DMP1Q13316 513 aaPredicted RBP16.65■□□□□ 0.26
VRK3-218ENST00000600031 FILIP1LQ4L180 1135 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 TUBGCP2Q9BSJ2 902 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 C16orf70Q9BSU1 422 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 CFHR5Q9BXR6 569 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 ST6GALNAC4Q9H4F1 302 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 C17orf75Q9HAS0 396 aa16.65■□□□□ 0.26
VRK3-218ENST00000600031 CLIC2O15247 247 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 NR2F2P24468 414 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 MTIF2P46199 727 aaKnown RBP16.64■□□□□ 0.25
VRK3-218ENST00000600031 RTP1P59025 263 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 GTF2BQ00403 316 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 ADAM9Q13443 819 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 FBXO38Q6PIJ6 1188 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 KRT222Q8N1A0 295 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 TMEM161BQ8NDZ6 487 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 SPIRE2Q8WWL2 714 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 CEP63Q96MT8 703 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 NTPCRQ9BSD7 190 aaKnown RBP16.64■□□□□ 0.25
VRK3-218ENST00000600031 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.64■□□□□ 0.25
VRK3-218ENST00000600031 TRPC6Q9Y210 931 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 V9GYY5 206 aaPredicted RBP16.64■□□□□ 0.25
VRK3-218ENST00000600031 CENPFP49454 3210 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 HBP1O60381 514 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 MAFO75444 373 aaPredicted RBP16.64■□□□□ 0.25
VRK3-218ENST00000600031 HOXD8P13378 290 aaPredicted RBP16.64■□□□□ 0.25
VRK3-218ENST00000600031 ARL2P36404 184 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 SMTNP53814 917 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 ALCAMQ13740 583 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 REXO1L1PQ8IX06 675 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 TRAPPC12Q8WVT3 735 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 TRIB2Q92519 343 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 KMT5AQ9NQR1 393 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 FAM53CQ9NYF3 392 aa16.64■□□□□ 0.25
VRK3-218ENST00000600031 ADGRA3Q8IWK6 1321 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 NR3C1P04150 777 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 PBX1P40424 430 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 IRX5P78411 483 aaPredicted RBP16.63■□□□□ 0.25
VRK3-218ENST00000600031 TBC1D8BQ0IIM8 1120 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 DRP2Q13474 957 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 TRIM65Q6PJ69 517 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 TRPV1Q8NER1 839 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 ASAP3Q8TDY4 903 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 GBP3Q9H0R5 595 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 DNAI1Q9UI46 699 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 PPME1Q9Y570 386 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 CETN3O15182 167 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 STX10O60499 249 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 GLRA2P23416 452 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 DGKDQ16760 1214 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 MIIPQ5JXC2 388 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 TLK2Q86UE8 772 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 TMEM139Q8IV31 216 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 SYCP3Q8IZU3 236 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 SLC17A8Q8NDX2 589 aa16.63■□□□□ 0.25
VRK3-218ENST00000600031 IFT74Q96LB3 600 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms