RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	KIZ	Q2M2Z5	673 aa		24.31	■■□□□ 1.48
LTBP4-227	ENST00000600026	C1orf186	Q6ZWK4	172 aa		24.31	■■□□□ 1.48
LTBP4-227	ENST00000600026	RHPN2	Q8IUC4	686 aa		24.31	■■□□□ 1.48
LTBP4-227	ENST00000600026	GRAMD1C	Q8IYS0	662 aa		24.31	■■□□□ 1.48
LTBP4-227	ENST00000600026	ZNF668	Q96K58	619 aa	Predicted RBP	24.31	■■□□□ 1.48
LTBP4-227	ENST00000600026	OSBPL7	Q9BZF2	842 aa		24.31	■■□□□ 1.48
LTBP4-227	ENST00000600026	POLR3F	Q9H1D9	316 aa	Predicted RBP	24.31	■■□□□ 1.48
LTBP4-227	ENST00000600026	GINS2	Q9Y248	185 aa		24.31	■■□□□ 1.48
LTBP4-227	ENST00000600026	COL4A3BP	Q9Y5P4	624 aa		24.31	■■□□□ 1.48
LTBP4-227	ENST00000600026	ARL2	P36404	184 aa		24.3	■■□□□ 1.48
LTBP4-227	ENST00000600026	PPIG	Q13427	754 aa	Known RBP eCLIP	24.3	■■□□□ 1.48
LTBP4-227	ENST00000600026	FAM102B	Q5T8I3	360 aa		24.3	■■□□□ 1.48
LTBP4-227	ENST00000600026	DEFB128	Q7Z7B8	93 aa		24.3	■■□□□ 1.48
LTBP4-227	ENST00000600026	KSR1	Q8IVT5	923 aa		24.3	■■□□□ 1.48
LTBP4-227	ENST00000600026	ASAP3	Q8TDY4	903 aa		24.3	■■□□□ 1.48
LTBP4-227	ENST00000600026	PRPF31	Q8WWY3	499 aa	Known RBP	24.3	■■□□□ 1.48
LTBP4-227	ENST00000600026	VWCE	Q96DN2	955 aa		24.3	■■□□□ 1.48
LTBP4-227	ENST00000600026	OSMR	Q99650	979 aa		24.3	■■□□□ 1.48
LTBP4-227	ENST00000600026	C7orf25	Q9BPX7	421 aa		24.3	■■□□□ 1.48
LTBP4-227	ENST00000600026	CDHR5	Q9HBB8	845 aa		24.3	■■□□□ 1.48
LTBP4-227	ENST00000600026	MYMK	A6NI61	221 aa		24.29	■■□□□ 1.48
LTBP4-227	ENST00000600026	SMC2	O95347	1197 aa		24.29	■■□□□ 1.48
LTBP4-227	ENST00000600026	FBXO47	Q5MNV8	452 aa		24.29	■■□□□ 1.48
LTBP4-227	ENST00000600026	CHRDL2	Q6WN34	429 aa		24.29	■■□□□ 1.48
LTBP4-227	ENST00000600026	NLRP4	Q96MN2	994 aa		24.29	■■□□□ 1.48
LTBP4-227	ENST00000600026	TIPIN	Q9BVW5	301 aa		24.29	■■□□□ 1.48
LTBP4-227	ENST00000600026	TRIM9	Q9C026	710 aa		24.29	■■□□□ 1.48
LTBP4-227	ENST00000600026	ADAMTS10	Q9H324	1103 aa		24.29	■■□□□ 1.48
LTBP4-227	ENST00000600026	IL23A	Q9NPF7	189 aa		24.29	■■□□□ 1.48
LTBP4-227	ENST00000600026	CXCL10	P02778	98 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	ACR	P10323	421 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	GHR	P10912	638 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	GUCY2C	P25092	1073 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	CRYBB1	P53674	252 aa	Predicted RBP	24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	EPHB4	P54760	987 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	LAMTOR4	Q0VGL1	99 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	PNOC	Q13519	176 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	LPIN1	Q14693	890 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	ARSH	Q5FYA8	562 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	ZNF710	Q8N1W2	664 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	NLRP7	Q8WX94	980 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	DDX12P	Q92771	950 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	SCLT1	Q96NL6	688 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	GDF15	Q99988	308 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	BLZF1	Q9H2G9	400 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	POLD4	Q9HCU8	107 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026	TMEM63C	Q9P1W3	806 aa		24.28	■■□□□ 1.48
LTBP4-227	ENST00000600026		A0A087WZ62	844 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	NPHP3-ACAD11	A0A0J9YXS1	232 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	ASAP2	O43150	1006 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	HIP1R	O75146	1068 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	PRR29	P0C7W0	189 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	GLRA2	P23416	452 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	ASIC1	P78348	528 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	CDC42EP1	Q00587	391 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	RAD51AP2	Q09MP3	1159 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	CUL4B	Q13620	913 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	CAPS	Q13938	189 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	MXD4	Q14582	209 aa	Predicted RBP	24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	CNNM4	Q6P4Q7	775 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	DYM	Q7RTS9	669 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	ZNF410	Q86VK4	478 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	TMEM40	Q8WWA1	233 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	CCDC47	Q96A33	483 aa	Known RBP	24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	FDXACB1	Q9BRP7	624 aa	Predicted RBP	24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	MICAL3	Q7RTP6	2002 aa		24.27	■■□□□ 1.48
LTBP4-227	ENST00000600026	LETM1	O95202	739 aa	Predicted RBP	24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	PFKM	P08237	780 aa		24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	CACNB1	Q02641	598 aa	Predicted RBP	24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	DPYD	Q12882	1025 aa		24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	MAPK7	Q13164	816 aa		24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	RPUSD2	Q8IZ73	545 aa	Known RBP	24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	DAW1	Q8N136	415 aa		24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	BSND	Q8WZ55	320 aa		24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	KIFAP3	Q92845	792 aa		24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	SMARCE1	Q969G3	411 aa		24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	ODF2L	Q9ULJ1	636 aa		24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	SQOR	Q9Y6N5	450 aa		24.26	■■□□□ 1.47
LTBP4-227	ENST00000600026	TBCA	O75347	108 aa	Known RBP	24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	SRGAP2C	P0DJJ0	459 aa		24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	IDE	P14735	1019 aa		24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	CASP1	P29466	404 aa		24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	GIT2	Q14161	759 aa		24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	PSRC1	Q6PGN9	363 aa	Predicted RBP	24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	TSHZ1	Q6ZSZ6	1077 aa		24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	C16orf59	Q7L2K0	433 aa		24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	CCDC65	Q8IXS2	484 aa		24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	RNF149	Q8NC42	400 aa		24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	DRC1	Q96MC2	740 aa		24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	REEP2	Q9BRK0	252 aa		24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	GCOM2	Q9BZD3	368 aa	Predicted RBP	24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	AGO3	Q9H9G7	860 aa	Known RBP	24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	NOC2L	Q9Y3T9	749 aa	Known RBP	24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	CEP290	O15078	2479 aa		24.25	■■□□□ 1.47
LTBP4-227	ENST00000600026	TRIOBP	Q9H2D6	2365 aa		24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	FAM13A	O94988	1023 aa		24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	DARS	P14868	501 aa	Known RBP	24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	CD52	P31358	61 aa		24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	TFDP1	Q14186	410 aa		24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	TCTN1	Q2MV58	587 aa		24.24	■■□□□ 1.47

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms