RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 MAEAQ7L5Y9 396 aa15.4■□□□□ 0.06
UPF1-205ENST00000598209 CRIPAKQ8N1N5 446 aa15.4■□□□□ 0.06
UPF1-205ENST00000598209 RNF149Q8NC42 400 aa15.4■□□□□ 0.06
UPF1-205ENST00000598209 MCPH1Q8NEM0 835 aa15.4■□□□□ 0.06
UPF1-205ENST00000598209 ASAP3Q8TDY4 903 aa15.4■□□□□ 0.06
UPF1-205ENST00000598209 ARNTL2Q8WYA1 636 aa15.4■□□□□ 0.06
UPF1-205ENST00000598209 POLR3FQ9H1D9 316 aaPredicted RBP15.4■□□□□ 0.06
UPF1-205ENST00000598209 BHMT2Q9H2M3 363 aa15.4■□□□□ 0.06
UPF1-205ENST00000598209 LRFN2Q9ULH4 789 aa15.4■□□□□ 0.06
UPF1-205ENST00000598209 CDH23Q9H251 3354 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 CHD9Q3L8U1 2897 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 DGKIO75912 1065 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 FOSL2P15408 326 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 TFDP1Q14186 410 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 PTPAQ15257 358 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 ZRSR1Q15695 479 aaKnown RBP15.39■□□□□ 0.05
UPF1-205ENST00000598209 CATSPER4Q7RTX7 472 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 SRGAP1Q7Z6B7 1085 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 AK8Q96MA6 479 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 TGS1Q96RS0 853 aaKnown RBP15.39■□□□□ 0.05
UPF1-205ENST00000598209 GAS2L1Q99501 681 aaPredicted RBP15.39■□□□□ 0.05
UPF1-205ENST00000598209 RC3H2Q9HBD1 1191 aaKnown RBP15.39■□□□□ 0.05
UPF1-205ENST00000598209 GPRC5CQ9NQ84 441 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 DNM3Q9UQ16 869 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 PCDHB7Q9Y5E2 793 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 ADGRA3Q8IWK6 1321 aa15.39■□□□□ 0.05
UPF1-205ENST00000598209 EPOPA6NHQ4 379 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 E9PMD0 336 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 EYA4O95677 639 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 PDIA4P13667 645 aaKnown RBP15.38■□□□□ 0.05
UPF1-205ENST00000598209 CYP11B2P19099 503 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 GLRA2P23416 452 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 PHKA2P46019 1235 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 PTENP60484 403 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 ERVK-21P61565 698 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 FAM189BP81408 668 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 CEBPZQ03701 1054 aaKnown RBP15.38■□□□□ 0.05
UPF1-205ENST00000598209 GRIN1Q05586 938 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 CAPSQ13938 189 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 HYIQ5T013 277 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 FAM102BQ5T8I3 360 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 ZNF689Q96CS4 500 aaPredicted RBP15.38■□□□□ 0.05
UPF1-205ENST00000598209 PNMA5Q96PV4 448 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 MINDY3Q9H8M7 445 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 CHST12Q9NRB3 414 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
UPF1-205ENST00000598209 MTUS1Q9ULD2 1270 aa15.38■□□□□ 0.05
UPF1-205ENST00000598209 CHD7Q9P2D1 2997 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 RFXAPO00287 272 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 LONP1P36776 959 aaKnown RBP15.37■□□□□ 0.05
UPF1-205ENST00000598209 GATMP50440 423 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 POU5F1BQ06416 359 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 GRB10Q13322 594 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 BTG3Q14201 252 aaPredicted RBP15.37■□□□□ 0.05
UPF1-205ENST00000598209 ADGRE1Q14246 886 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 FOXD4L5Q5VV16 416 aaPredicted RBP15.37■□□□□ 0.05
UPF1-205ENST00000598209 KCNK18Q7Z418 384 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 CABP7Q86V35 215 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 FIBCD1Q8N539 461 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 FOXD4L4Q8WXT5 416 aaPredicted RBP15.37■□□□□ 0.05
UPF1-205ENST00000598209 CDK5RAP3Q96JB5 506 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 USP28Q96RU2 1077 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 PLIN2Q99541 437 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 C17orf80Q9BSJ5 609 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 NT5C3AQ9H0P0 336 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 ELAC1Q9H777 363 aaKnown RBP15.37■□□□□ 0.05
UPF1-205ENST00000598209 TMEM161AQ9NX61 479 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 DACT1Q9NYF0 836 aa15.37■□□□□ 0.05
UPF1-205ENST00000598209 PIN4Q9Y237 131 aaKnown RBP15.37■□□□□ 0.05
UPF1-205ENST00000598209 SLC26A4O43511 780 aa15.36■□□□□ 0.05
UPF1-205ENST00000598209 ZSCAN22P10073 491 aaPredicted RBP15.36■□□□□ 0.05
UPF1-205ENST00000598209 IGFBP4P22692 258 aa15.36■□□□□ 0.05
UPF1-205ENST00000598209 MARCKSP29966 332 aaPredicted RBP15.36■□□□□ 0.05
UPF1-205ENST00000598209 UBA7P41226 1012 aa15.36■□□□□ 0.05
UPF1-205ENST00000598209 TMEM119Q4V9L6 283 aa15.36■□□□□ 0.05
UPF1-205ENST00000598209 PAN2Q504Q3 1202 aaKnown RBP15.36■□□□□ 0.05
UPF1-205ENST00000598209 TWF2Q6IBS0 349 aaKnown RBP15.36■□□□□ 0.05
UPF1-205ENST00000598209 ECHDC2Q86YB7 292 aa15.36■□□□□ 0.05
UPF1-205ENST00000598209 IFNLR1Q8IU57 520 aaPredicted RBP15.36■□□□□ 0.05
UPF1-205ENST00000598209 CMTR2Q8IYT2 770 aaKnown RBP15.36■□□□□ 0.05
UPF1-205ENST00000598209 KCTD17Q8N5Z5 321 aa15.36■□□□□ 0.05
UPF1-205ENST00000598209 SAMD11Q96NU1 681 aa15.36■□□□□ 0.05
UPF1-205ENST00000598209 AGPAT5Q9NUQ2 364 aa15.36■□□□□ 0.05
UPF1-205ENST00000598209 A0A0U1RQF3 1178 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 LRRIQ4A6NIV6 560 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 INO80B-WBP1J3KQ70 363 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 ERLIN2O94905 339 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 MBTD1Q05BQ5 628 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 PKP1Q13835 747 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 EPC2Q52LR7 807 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 TMEM192Q8IY95 271 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 FBXO22Q8NEZ5 403 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 MAFAQ8NHW3 353 aaPredicted RBP15.35■□□□□ 0.05
UPF1-205ENST00000598209 GDPD5Q8WTR4 605 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 BSNDQ8WZ55 320 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 CALML4Q96GE6 196 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 ZNF396Q96N95 335 aaPredicted RBP15.35■□□□□ 0.05
UPF1-205ENST00000598209 RUSC1Q9BVN2 902 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 NFKBIZQ9BYH8 718 aa15.35■□□□□ 0.05
UPF1-205ENST00000598209 POLD4Q9HCU8 107 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms