RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 FDXACB1Q9BRP7 624 aaPredicted RBP11.84□□□□□ -0.51
LSM4-205ENST00000597776 PHF7Q9BWX1 381 aaPredicted RBP11.84□□□□□ -0.51
LSM4-205ENST00000597776 GCOM2Q9BZD3 368 aaPredicted RBP11.84□□□□□ -0.51
LSM4-205ENST00000597776 SPG21Q9NZD8 308 aa11.84□□□□□ -0.51
LSM4-205ENST00000597776 DDX25Q9UHL0 483 aaKnown RBP11.84□□□□□ -0.51
LSM4-205ENST00000597776 PUF60Q9UHX1 559 aaKnown RBP11.84□□□□□ -0.51
LSM4-205ENST00000597776 CDH22Q9UJ99 828 aa11.84□□□□□ -0.51
LSM4-205ENST00000597776 IGKV6-21A0A0C4DH24 114 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 NT5C1B-RDH14C9J2C7 533 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 EML1O00423 815 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 SP100P23497 879 aaPredicted RBP11.83□□□□□ -0.52
LSM4-205ENST00000597776 KRT17Q04695 432 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 CBX2Q14781 532 aaPredicted RBP11.83□□□□□ -0.52
LSM4-205ENST00000597776 NONOQ15233 471 aaKnown RBP eCLIP11.83□□□□□ -0.52
LSM4-205ENST00000597776 LETM2Q2VYF4 491 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 ANKRD54Q6NXT1 300 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 SYCE2Q6PIF2 218 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 CPLX2Q6PUV4 134 aaKnown RBP11.83□□□□□ -0.52
LSM4-205ENST00000597776 ANO5Q75V66 913 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 TMC7Q7Z402 723 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 RHPN2Q8IUC4 686 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 SLC39A11Q8N1S5 342 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 LPPQ93052 612 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 NLRP4Q96MN2 994 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 TM6SF1Q9BZW5 370 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 S1PR5Q9H228 398 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 NGRNQ9NPE2 291 aaKnown RBP11.83□□□□□ -0.52
LSM4-205ENST00000597776 GJB4Q9NTQ9 266 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 PDRG1Q9NUG6 133 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 DACT1Q9NYF0 836 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 SUCLA2Q9P2R7 463 aaPredicted RBP11.83□□□□□ -0.52
LSM4-205ENST00000597776 VAV3Q9UKW4 847 aa11.83□□□□□ -0.52
LSM4-205ENST00000597776 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
LSM4-205ENST00000597776 TECTAO75443 2155 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 FSD2A1L4K1 749 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 TMEM221A6NGB7 291 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 MEIS3P2A8K0S8 358 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 M0R296 226 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 EOMESO95936 686 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 SRGAP2BP0DMP2 458 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 CA8P35219 290 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 PHKA2P46019 1235 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 DNM2P50570 870 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 NPEPPSP55786 919 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 BCAR1P56945 870 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 NHLH1Q02575 133 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 SCRN1Q12765 414 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 TWF2Q6IBS0 349 aaKnown RBP11.82□□□□□ -0.52
LSM4-205ENST00000597776 GALNT17Q6IS24 598 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 MOXD1Q6UVY6 613 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 TMEM184AQ6ZMB5 413 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 TRIM67Q6ZTA4 783 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 KRT25Q7Z3Z0 450 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 ALYREFQ86V81 257 aaKnown RBP11.82□□□□□ -0.52
LSM4-205ENST00000597776 TMEM173Q86WV6 379 aaPredicted RBP11.82□□□□□ -0.52
LSM4-205ENST00000597776 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
LSM4-205ENST00000597776 MFSD14AQ96MC6 490 aa11.82□□□□□ -0.52
LSM4-205ENST00000597776 WRAP73Q9P2S5 460 aaPredicted RBP11.82□□□□□ -0.52
LSM4-205ENST00000597776 CCDC194A0A1B0GVG4 234 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 C2orf71A6NGG8 1288 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 EPB41L2O43491 1005 aaKnown RBP11.81□□□□□ -0.52
LSM4-205ENST00000597776 ZC3H11AO75152 810 aaKnown RBP eCLIP11.81□□□□□ -0.52
LSM4-205ENST00000597776 MAFO75444 373 aaPredicted RBP11.81□□□□□ -0.52
LSM4-205ENST00000597776 SFPQP23246 707 aaKnown RBP eCLIP11.81□□□□□ -0.52
LSM4-205ENST00000597776 PSMC5P62195 406 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 ZXDAP98168 799 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 PPP2R5CQ13362 524 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 SMC1AQ14683 1233 aaKnown RBP11.81□□□□□ -0.52
LSM4-205ENST00000597776 CATSPER4Q7RTX7 472 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 ZNF410Q86VK4 478 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 MRPL43Q8N983 215 aaKnown RBP11.81□□□□□ -0.52
LSM4-205ENST00000597776 OXER1Q8TDS5 423 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 BCL7CQ8WUZ0 217 aaPredicted RBP11.81□□□□□ -0.52
LSM4-205ENST00000597776 AUTS2Q8WXX7 1259 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 PHF20Q9BVI0 1012 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 MRPL9Q9BYD2 267 aaKnown RBP11.81□□□□□ -0.52
LSM4-205ENST00000597776 SLKQ9H2G2 1235 aaPredicted RBP11.81□□□□□ -0.52
LSM4-205ENST00000597776 KCNMB3Q9NPA1 279 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 CYP26B1Q9NR63 512 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 CHST12Q9NRB3 414 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 BMP2KQ9NSY1 1161 aaPredicted RBP11.81□□□□□ -0.52
LSM4-205ENST00000597776 INPP5FQ9Y2H2 1132 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 HCFC2Q9Y5Z7 792 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 ZNF318Q5VUA4 2279 aa11.81□□□□□ -0.52
LSM4-205ENST00000597776 FAM205CA6NFA0 338 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 B4GALT3O60512 393 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 CLASP2O75122 1294 aaKnown RBP11.8□□□□□ -0.52
LSM4-205ENST00000597776 QARSP47897 775 aaKnown RBP11.8□□□□□ -0.52
LSM4-205ENST00000597776 ALDH7A1P49419 539 aaKnown RBP11.8□□□□□ -0.52
LSM4-205ENST00000597776 CDC42EP1Q00587 391 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 NOMO2Q5JPE7 1267 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 EARS2Q5JPH6 523 aaKnown RBP11.8□□□□□ -0.52
LSM4-205ENST00000597776 GLB1LQ6UWU2 654 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 PIK3AP1Q6ZUJ8 805 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 NEK8Q86SG6 692 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 FAM177A1Q8N128 213 aaPredicted RBP11.8□□□□□ -0.52
LSM4-205ENST00000597776 VPS52Q8N1B4 723 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 TMEM143Q96AN5 459 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 PBXIP1Q96AQ6 731 aa11.8□□□□□ -0.52
LSM4-205ENST00000597776 TMEM169Q96HH4 297 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms