RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 ST13P5Q8NFI4 369 aaPredicted RBP17.6■□□□□ 0.41
LIG1-214ENST00000597146 MYADMQ96S97 322 aa17.6■□□□□ 0.41
LIG1-214ENST00000597146 AGO4Q9HCK5 861 aaKnown RBP17.6■□□□□ 0.41
LIG1-214ENST00000597146 CDV3Q9UKY7 258 aaKnown RBP17.6■□□□□ 0.41
LIG1-214ENST00000597146 DOCK6Q96HP0 2047 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 hCG_1642624A0A1W2PR95 340 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 NLRP11P59045 1033 aaKnown RBP17.59■□□□□ 0.41
LIG1-214ENST00000597146 FAM160B1Q5W0V3 765 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 PDXDC2PQ6P474 469 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 ABHD15Q6UXT9 468 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 C15orf39Q6ZRI6 1047 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 CATIPQ7Z7H3 387 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 PJA1Q8NG27 643 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 PGBD1Q96JS3 809 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 KLHL5Q96PQ7 755 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 ZNF302Q9NR11 478 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 TAF6LQ9Y6J9 622 aa17.59■□□□□ 0.41
LIG1-214ENST00000597146 CLUHO75153 1309 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 A0A0U1RQF3 1178 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 B4GALT3O60512 393 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 ADRB1P08588 477 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 CNPP09543 421 aaKnown RBP17.58■□□□□ 0.4
LIG1-214ENST00000597146 MYBP10242 640 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 KLRC2P26717 231 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 TRDNQ13061 729 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 NONOQ15233 471 aaKnown RBP eCLIP17.58■□□□□ 0.4
LIG1-214ENST00000597146 LONRF3Q496Y0 759 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 LPPQ93052 612 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 ADAMTS10Q9H324 1103 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 MAN1C1Q9NR34 630 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 EPS15L1Q9UBC2 864 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 AKT3Q9Y243 479 aa17.58■□□□□ 0.4
LIG1-214ENST00000597146 MTCL1Q9Y4B5 1905 aaKnown RBP17.58■□□□□ 0.4
LIG1-214ENST00000597146 SDHBP21912 280 aa17.57■□□□□ 0.4
LIG1-214ENST00000597146 EIF4BP23588 611 aaKnown RBP17.57■□□□□ 0.4
LIG1-214ENST00000597146 KIF5BP33176 963 aa17.57■□□□□ 0.4
LIG1-214ENST00000597146 SWSAP1Q6NVH7 229 aa17.57■□□□□ 0.4
LIG1-214ENST00000597146 DCLRE1AQ6PJP8 1040 aa17.57■□□□□ 0.4
LIG1-214ENST00000597146 LRRC71Q8N4P6 559 aa17.57■□□□□ 0.4
LIG1-214ENST00000597146 CTCFLQ8NI51 663 aaPredicted RBP17.57■□□□□ 0.4
LIG1-214ENST00000597146 NRDE2Q9H7Z3 1164 aa17.57■□□□□ 0.4
LIG1-214ENST00000597146 WDR6Q9NNW5 1121 aaKnown RBP17.57■□□□□ 0.4
LIG1-214ENST00000597146 DNAJB4Q9UDY4 337 aa17.57■□□□□ 0.4
LIG1-214ENST00000597146 USP18Q9UMW8 372 aa17.57■□□□□ 0.4
LIG1-214ENST00000597146 INPP5FQ9Y2H2 1132 aa17.57■□□□□ 0.4
LIG1-214ENST00000597146 SPTLC1O15269 473 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 NEFLP07196 543 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 GALTP07902 379 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 SLC11A1P49279 550 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 ANTXR2P58335 489 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 LMNB2Q03252 620 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 CKAP2LQ8IYA6 745 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 ZNF654Q8IZM8 581 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 SRBD1Q8N5C6 995 aaKnown RBP17.56■□□□□ 0.4
LIG1-214ENST00000597146 RTKNQ9BST9 563 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 EMILIN2Q9BXX0 1053 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 GBP3Q9H0R5 595 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 TBC1D13Q9NVG8 400 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 SPATA6Q9NWH7 488 aaPredicted RBP17.56■□□□□ 0.4
LIG1-214ENST00000597146 SMG5Q9UPR3 1016 aaKnown RBP17.56■□□□□ 0.4
LIG1-214ENST00000597146 FRYQ5TBA9 3013 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 CEP295Q9C0D2 2601 aa17.56■□□□□ 0.4
LIG1-214ENST00000597146 CCDC195A0A1B0GUA6 201 aa17.55■□□□□ 0.4
LIG1-214ENST00000597146 MEIS3P2A8K0S8 358 aa17.55■□□□□ 0.4
LIG1-214ENST00000597146 PRR5-ARHGAP8B1AHC4 643 aa17.55■□□□□ 0.4
LIG1-214ENST00000597146 CSDE1O75534 798 aaKnown RBP17.55■□□□□ 0.4
LIG1-214ENST00000597146 CYP21A2P08686 494 aa17.55■□□□□ 0.4
LIG1-214ENST00000597146 RXRAP19793 462 aa17.55■□□□□ 0.4
LIG1-214ENST00000597146 ARHGAP8P85298 464 aa17.55■□□□□ 0.4
LIG1-214ENST00000597146 SART3Q15020 963 aaKnown RBP17.55■□□□□ 0.4
LIG1-214ENST00000597146 CEP55Q53EZ4 464 aa17.55■□□□□ 0.4
LIG1-214ENST00000597146 LINC01465Q8N7H1 131 aa17.55■□□□□ 0.4
LIG1-214ENST00000597146 CMASQ8NFW8 434 aaPredicted RBP17.55■□□□□ 0.4
LIG1-214ENST00000597146 BBXQ8WY36 941 aaPredicted RBP17.55■□□□□ 0.4
LIG1-214ENST00000597146 STAMQ92783 540 aa17.55■□□□□ 0.4
LIG1-214ENST00000597146 CHAMP1Q96JM3 812 aa17.55■□□□□ 0.4
LIG1-214ENST00000597146 MAP7D2Q96T17 732 aa17.55■□□□□ 0.4
LIG1-214ENST00000597146 INPPL1O15357 1258 aa17.54■□□□□ 0.4
LIG1-214ENST00000597146 RFPL2O75678 378 aa17.54■□□□□ 0.4
LIG1-214ENST00000597146 EFCAB12Q6NXP0 572 aa17.54■□□□□ 0.4
LIG1-214ENST00000597146 MIS18BP1Q6P0N0 1132 aa17.54■□□□□ 0.4
LIG1-214ENST00000597146 GET4Q7L5D6 327 aaPredicted RBP17.54■□□□□ 0.4
LIG1-214ENST00000597146 RALYLQ86SE5 291 aaKnown RBP17.54■□□□□ 0.4
LIG1-214ENST00000597146 GPR161Q8N6U8 529 aaKnown RBP17.54■□□□□ 0.4
LIG1-214ENST00000597146 SCLT1Q96NL6 688 aa17.54■□□□□ 0.4
LIG1-214ENST00000597146 PARD6AQ9NPB6 346 aa17.54■□□□□ 0.4
LIG1-214ENST00000597146 C2CD2LO14523 706 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 LAMTOR5O43504 91 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 LILRB3O75022 631 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 DDAH1O94760 285 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 DARSP14868 501 aaKnown RBP17.53■□□□□ 0.4
LIG1-214ENST00000597146 TGM1P22735 817 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 SMARCA1P28370 1054 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 PHKA2P46019 1235 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 GPC3P51654 580 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 CSTF1Q05048 431 aaKnown RBP17.53■□□□□ 0.4
LIG1-214ENST00000597146 RNASELQ05823 741 aaKnown RBP17.53■□□□□ 0.4
LIG1-214ENST00000597146 HTR4Q13639 388 aa17.53■□□□□ 0.4
LIG1-214ENST00000597146 COL9A2Q14055 689 aaPredicted RBP17.53■□□□□ 0.4
LIG1-214ENST00000597146 ZNF528Q3MIS6 628 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms