RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 OSBPL7Q9BZF2 842 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 INO80BQ9C086 356 aaPredicted RBP9.26□□□□□ -0.93
VRK3-211ENST00000596445 TNMDQ9H2S6 317 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 GOLPH3LQ9H4A5 285 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 C17orf75Q9HAS0 396 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 MAGEF1Q9HAY2 307 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 IFT122Q9HBG6 1241 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 KBTBD4Q9NVX7 518 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 ODF2LQ9ULJ1 636 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 GINS2Q9Y248 185 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 LAMA3Q16787 3333 aa9.26□□□□□ -0.93
VRK3-211ENST00000596445 NPHP3-ACAD11A0A0J9YXS1 232 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 ACTN4O43707 911 aaKnown RBP9.25□□□□□ -0.93
VRK3-211ENST00000596445 RPS6KA5O75582 802 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 KRT18P05783 430 aaKnown RBP9.25□□□□□ -0.93
VRK3-211ENST00000596445 DARSP14868 501 aaKnown RBP9.25□□□□□ -0.93
VRK3-211ENST00000596445 BMP8BP34820 402 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 NAMPTP43490 491 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 PHKA2P46019 1235 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 EPHB4P54760 987 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 PTENP60484 403 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 DMP1Q13316 513 aaPredicted RBP9.25□□□□□ -0.93
VRK3-211ENST00000596445 CAPSQ13938 189 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 GIT2Q14161 759 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 PPP2R5AQ15172 486 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 LONRF3Q496Y0 759 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 ODR4Q5SWX8 454 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 PSRC1Q6PGN9 363 aaPredicted RBP9.25□□□□□ -0.93
VRK3-211ENST00000596445 FAM43BQ6ZT52 329 aaPredicted RBP9.25□□□□□ -0.93
VRK3-211ENST00000596445 C16orf59Q7L2K0 433 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 SRGAP1Q7Z6B7 1085 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 IFNLR1Q8IU57 520 aaPredicted RBP9.25□□□□□ -0.93
VRK3-211ENST00000596445 CEP57L1Q8IYX8 460 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 TMEM40Q8WWA1 233 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 BSNDQ8WZ55 320 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 SEPT8Q92599 483 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 DDX12PQ92771 950 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 APBB2Q92870 758 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 DNAJC19Q96DA6 116 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 ZNF668Q96K58 619 aaPredicted RBP9.25□□□□□ -0.93
VRK3-211ENST00000596445 GBP4Q96PP9 640 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 REEP2Q9BRK0 252 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 NFKBIZQ9BYH8 718 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 IFIH1Q9BYX4 1025 aaKnown RBP9.25□□□□□ -0.93
VRK3-211ENST00000596445 LRRC27Q9C0I9 530 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 AGO3Q9H9G7 860 aaKnown RBP9.25□□□□□ -0.93
VRK3-211ENST00000596445 POLD4Q9HCU8 107 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 PADI3Q9ULW8 664 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 NOC2LQ9Y3T9 749 aaKnown RBP9.25□□□□□ -0.93
VRK3-211ENST00000596445 MICAL3Q7RTP6 2002 aa9.25□□□□□ -0.93
VRK3-211ENST00000596445 MYMKA6NI61 221 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 LRRIQ4A6NIV6 560 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 SFI1A8K8P3 1242 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 GPR182O15218 404 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 GADD45BO75293 160 aaPredicted RBP9.24□□□□□ -0.93
VRK3-211ENST00000596445 PRPF40AO75400 957 aaKnown RBP9.24□□□□□ -0.93
VRK3-211ENST00000596445 FAM13AO94988 1023 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 ZNF202O95125 648 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 FGBP02675 491 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 ACRP10323 421 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 PLS3P13797 630 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 SFPQP23246 707 aaKnown RBP eCLIP9.24□□□□□ -0.93
VRK3-211ENST00000596445 CD52P31358 61 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 NPTX2P47972 431 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 ZNF131P52739 623 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 PEX3P56589 373 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 UBE2HP62256 183 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 FAM160A1Q05DH4 1040 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 PAK2Q13177 524 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 SNW1Q13573 536 aaKnown RBP9.24□□□□□ -0.93
VRK3-211ENST00000596445 IKBKEQ14164 716 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 PCBP1Q15365 356 aaKnown RBP eCLIP9.24□□□□□ -0.93
VRK3-211ENST00000596445 TMEM240Q5SV17 173 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 CDCA2Q69YH5 1023 aaPredicted RBP9.24□□□□□ -0.93
VRK3-211ENST00000596445 CNNM4Q6P4Q7 775 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 CNKSR3Q6P9H4 555 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 ZNF365Q70YC5 407 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 DYMQ7RTS9 669 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 FAM228AQ86W67 206 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 FMR1NBQ8N0W7 255 aaPredicted RBP9.24□□□□□ -0.93
VRK3-211ENST00000596445 DBF4BQ8NFT6 615 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 STAMQ92783 540 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.24□□□□□ -0.938e-11■■■■□ 20.6
VRK3-211ENST00000596445 UBE2OQ9C0C9 1292 aaKnown RBP9.24□□□□□ -0.93
VRK3-211ENST00000596445 C2orf40Q9H1Z8 148 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 PARVGQ9HBI0 331 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 LARSQ9P2J5 1176 aaKnown RBP9.24□□□□□ -0.93
VRK3-211ENST00000596445 SERTAD1Q9UHV2 236 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 KCNG1Q9UIX4 513 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 ST3GAL5Q9UNP4 418 aa9.24□□□□□ -0.93
VRK3-211ENST00000596445 ABHD14A-ACY1A0A1B0GW23 586 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 EFCAB14O75071 495 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 TBCAO75347 108 aaKnown RBP9.23□□□□□ -0.93
VRK3-211ENST00000596445 CSDE1O75534 798 aaKnown RBP9.23□□□□□ -0.93
VRK3-211ENST00000596445 BAIAP3O94812 1187 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 MYL1P05976 194 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 ACTN1P12814 892 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 GAP43P17677 238 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 EFNA5P52803 228 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 SMTNP53814 917 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms