RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 SMAP1Q8IYB5 467 aaPredicted RBP17.91■□□□□ 0.46
USHBP1-206ENST00000596436 PRSS33Q8NF86 280 aa17.91■□□□□ 0.46
USHBP1-206ENST00000596436 OSMRQ99650 979 aa17.91■□□□□ 0.46
USHBP1-206ENST00000596436 SMC3Q9UQE7 1217 aa17.91■□□□□ 0.46
USHBP1-206ENST00000596436 K7ELQ4 463 aaPredicted RBP17.9■□□□□ 0.46
USHBP1-206ENST00000596436 PER2O15055 1255 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 CCNT1O60563 726 aaKnown RBP17.9■□□□□ 0.46
USHBP1-206ENST00000596436 PSMD10O75832 226 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 FGFR1P11362 822 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 GCFC2P16383 781 aaKnown RBP17.9■□□□□ 0.46
USHBP1-206ENST00000596436 LAG3P18627 525 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 LRCH2Q5VUJ6 765 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 LRRC55Q6ZSA7 311 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 POTEDQ86YR6 584 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 MRPS27Q92552 414 aaKnown RBP17.9■□□□□ 0.46
USHBP1-206ENST00000596436 SNX21Q969T3 373 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 RIT2Q99578 217 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 TMEM117Q9H0C3 514 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 S1PR5Q9H228 398 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 FOXP1Q9H334 677 aaPredicted RBP17.9■□□□□ 0.46
USHBP1-206ENST00000596436 ATP6V0A4Q9HBG4 840 aa17.9■□□□□ 0.46
USHBP1-206ENST00000596436 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.9■□□□□ 0.46
USHBP1-206ENST00000596436 GAS7O60861 476 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 VTNP04004 478 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 SPOUT1Q5T280 376 aaKnown RBP17.89■□□□□ 0.45
USHBP1-206ENST00000596436 B3GNT9Q6UX72 402 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 THNSL1Q8IYQ7 743 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 ZNF710Q8N1W2 664 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 HAS1Q92839 578 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 CASD1Q96PB1 797 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 TEKT3Q9BXF9 490 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 ADAMTS10Q9H324 1103 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 UNC45AQ9H3U1 944 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 KCNMB3Q9NPA1 279 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 CEP131Q9UPN4 1083 aa17.89■□□□□ 0.45
USHBP1-206ENST00000596436 ZDBF2Q9HCK1 2354 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 MAGEB2O15479 319 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 SIGLEC14Q08ET2 396 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 IER5LQ5T953 404 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 SYCE2Q6PIF2 218 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 NOSTRINQ8IVI9 506 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 FBXL6Q8N531 539 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 MICAL1Q8TDZ2 1067 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 PBXIP1Q96AQ6 731 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 ASIC4Q96FT7 647 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 NAP1L4Q99733 375 aaKnown RBP17.88■□□□□ 0.45
USHBP1-206ENST00000596436 PRRX2Q99811 253 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 KIF3AQ9Y496 699 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 PCDHA10Q9Y5I2 948 aa17.88■□□□□ 0.45
USHBP1-206ENST00000596436 HOXA2O43364 376 aa17.87■□□□□ 0.45
USHBP1-206ENST00000596436 CHMP2AO43633 222 aa17.87■□□□□ 0.45
USHBP1-206ENST00000596436 PSAPP07602 524 aa17.87■□□□□ 0.45
USHBP1-206ENST00000596436 U2AF2P26368 475 aaKnown RBP eCLIP17.87■□□□□ 0.45
USHBP1-206ENST00000596436 ANKRD54Q6NXT1 300 aa17.87■□□□□ 0.45
USHBP1-206ENST00000596436 FAM167AQ96KS9 214 aa17.87■□□□□ 0.45
USHBP1-206ENST00000596436 PPP1R16BQ96T49 567 aa17.87■□□□□ 0.45
USHBP1-206ENST00000596436 NGRNQ9NPE2 291 aaKnown RBP17.87■□□□□ 0.45
USHBP1-206ENST00000596436 VAV3Q9UKW4 847 aa17.87■□□□□ 0.45
USHBP1-206ENST00000596436 HIDE1A8MVS5 230 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 ZNF862O60290 1169 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 SRGAP2BP0DMP2 458 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 HOXB8P17481 243 aaPredicted RBP17.86■□□□□ 0.45
USHBP1-206ENST00000596436 ATP2B1P20020 1258 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 IBSPP21815 317 aaPredicted RBP17.86■□□□□ 0.45
USHBP1-206ENST00000596436 EIF4BP23588 611 aaKnown RBP17.86■□□□□ 0.45
USHBP1-206ENST00000596436 PPM1AP35813 382 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 CLCN3P51790 818 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 PTPN5P54829 565 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 NLRP11P59045 1033 aaKnown RBP17.86■□□□□ 0.45
USHBP1-206ENST00000596436 TCF15Q12870 199 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 UGCGQ16739 394 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 PTPN21Q16825 1174 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 KCNT2Q6UVM3 1135 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 ZNF598Q86UK7 904 aaKnown RBP17.86■□□□□ 0.45
USHBP1-206ENST00000596436 ECHDC2Q86YB7 292 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 CKAP2LQ8IYA6 745 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 LRRC43Q8N309 656 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 METTL13Q8N6R0 699 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 RPGRIP1Q96KN7 1286 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 FAM20AQ96MK3 541 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 PHOX2BQ99453 314 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 TCF25Q9BQ70 676 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 DISC1Q9NRI5 854 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 FOXD4L1Q9NU39 408 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 GABBR1Q9UBS5 961 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 TCEAL9Q9UHQ7 104 aa17.86■□□□□ 0.45
USHBP1-206ENST00000596436 MYO15AQ9UKN7 3530 aa17.85■□□□□ 0.45
USHBP1-206ENST00000596436 WDR64B1ANS9 1081 aa17.85■□□□□ 0.45
USHBP1-206ENST00000596436 EML1O00423 815 aa17.85■□□□□ 0.45
USHBP1-206ENST00000596436 TBX3O15119 743 aa17.85■□□□□ 0.45
USHBP1-206ENST00000596436 GNL2Q13823 731 aaKnown RBP17.85■□□□□ 0.45
USHBP1-206ENST00000596436 NBR1Q14596 966 aa17.85■□□□□ 0.45
USHBP1-206ENST00000596436 CLLU1OSQ5K130 101 aa17.85■□□□□ 0.45
USHBP1-206ENST00000596436 PLPP4Q5VZY2 271 aa17.85■□□□□ 0.45
USHBP1-206ENST00000596436 EFCAB12Q6NXP0 572 aa17.85■□□□□ 0.45
USHBP1-206ENST00000596436 ZNF558Q96NG5 402 aa17.85■□□□□ 0.45
USHBP1-206ENST00000596436 TMEM60Q9H2L4 133 aa17.85■□□□□ 0.45
USHBP1-206ENST00000596436 PUF60Q9UHX1 559 aaKnown RBP17.85■□□□□ 0.45
USHBP1-206ENST00000596436 SAMM50Q9Y512 469 aa17.85■□□□□ 0.45
USHBP1-206ENST00000596436 CFAP54Q96N23 3096 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms