RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 FAM43BQ6ZT52 329 aaPredicted RBP15.92■□□□□ 0.14
LIG1-208ENST00000595758 FAM228AQ86W67 206 aa15.92■□□□□ 0.14
LIG1-208ENST00000595758 LRRC15Q8TF66 581 aa15.92■□□□□ 0.14
LIG1-208ENST00000595758 KIFAP3Q92845 792 aa15.92■□□□□ 0.14
LIG1-208ENST00000595758 FTHL17Q9BXU8 183 aa15.92■□□□□ 0.14
LIG1-208ENST00000595758 IFT122Q9HBG6 1241 aa15.92■□□□□ 0.14
LIG1-208ENST00000595758 POLD4Q9HCU8 107 aa15.92■□□□□ 0.14
LIG1-208ENST00000595758 CHMP5Q9NZZ3 219 aa15.92■□□□□ 0.14
LIG1-208ENST00000595758 STK17AQ9UEE5 414 aa15.92■□□□□ 0.14
LIG1-208ENST00000595758 ATP2A2P16615 1042 aaKnown RBP15.91■□□□□ 0.14
LIG1-208ENST00000595758 GUCY2CP25092 1073 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 STAT6P42226 847 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 PHKA2P46019 1235 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 POU5F1BQ06416 359 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 CAPSQ13938 189 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 DHX8Q14562 1220 aaKnown RBP15.91■□□□□ 0.14
LIG1-208ENST00000595758 MCM6Q14566 821 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 SRGAP1Q7Z6B7 1085 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 GPBP1Q86WP2 473 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 LARP4BQ92615 738 aaKnown RBP15.91■□□□□ 0.14
LIG1-208ENST00000595758 TIPINQ9BVW5 301 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 TMX1Q9H3N1 280 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 FAM13BQ9NYF5 915 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 KCND2Q9NZV8 630 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 SIP14410 1827 aa15.91■□□□□ 0.14
LIG1-208ENST00000595758 A0A087X0B3 334 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.9■□□□□ 0.14
LIG1-208ENST00000595758 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.9■□□□□ 0.14
LIG1-208ENST00000595758 ENPP3O14638 875 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 HIP1RO75146 1068 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 AMHP03971 560 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 FGFR4P22455 802 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 SFPQP23246 707 aaKnown RBP eCLIP15.9■□□□□ 0.14
LIG1-208ENST00000595758 PTENP60484 403 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 RAD51AP2Q09MP3 1159 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 PPP2R5AQ15172 486 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 ARSHQ5FYA8 562 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 RESP18Q5W5W9 173 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.9■□□□□ 0.14
LIG1-208ENST00000595758 PDILTQ8N807 584 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 PHOSPHO2Q8TCD6 241 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 IFT74Q96LB3 600 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 DRC1Q96MC2 740 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 IPO9Q96P70 1041 aaKnown RBP15.9■□□□□ 0.14
LIG1-208ENST00000595758 SLC9A7Q96T83 725 aa15.9■□□□□ 0.14
LIG1-208ENST00000595758 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.89■□□□□ 0.13
LIG1-208ENST00000595758 DENND3A2RUS2 1198 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 LRRIQ4A6NIV6 560 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 GRXCR1A8MXD5 290 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 KRT18P05783 430 aaKnown RBP15.89■□□□□ 0.13
LIG1-208ENST00000595758 DEFB103AP81534 67 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 NAALADL2Q58DX5 795 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 ADALQ6DHV7 355 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 FAM109BQ6ICB4 259 aaPredicted RBP15.89■□□□□ 0.13
LIG1-208ENST00000595758 SV2BQ7L1I2 683 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 CATSPER4Q7RTX7 472 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 RTN4RL1Q86UN2 441 aaPredicted RBP15.89■□□□□ 0.13
LIG1-208ENST00000595758 IFNLR1Q8IU57 520 aaPredicted RBP15.89■□□□□ 0.13
LIG1-208ENST00000595758 BSNDQ8WZ55 320 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 NFKBIZQ9BYH8 718 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 TSPYL2Q9H2G4 693 aaPredicted RBP15.89■□□□□ 0.13
LIG1-208ENST00000595758 MINDY3Q9H8M7 445 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 GDPD2Q9HCC8 539 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 LOXHD1Q8IVV2 1947 aa15.89■□□□□ 0.13
LIG1-208ENST00000595758 NPHP3-ACAD11A0A0J9YXS1 232 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 INO80B-WBP1J3KQ70 363 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 ZSCAN20P17040 1043 aaPredicted RBP15.88■□□□□ 0.13
LIG1-208ENST00000595758 CMA1P23946 247 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 NAMPTP43490 491 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 SMAD3P84022 425 aaKnown RBP15.88■□□□□ 0.13
LIG1-208ENST00000595758 MAPK7Q13164 816 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 HERC6Q8IVU3 1022 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 ZBTB8OSQ8IWT0 167 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 MYOCDQ8IZQ8 938 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 DAW1Q8N136 415 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 IQUBQ8NA54 791 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 DEPTORQ8TB45 409 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 LINC01599Q8WXQ3 324 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 ADAM2Q99965 735 aa15.88■□□□□ 0.13
LIG1-208ENST00000595758 SFI1A8K8P3 1242 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 MGEA5O60502 916 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 PEX3P56589 373 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 MBTD1Q05BQ5 628 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 DMP1Q13316 513 aaPredicted RBP15.87■□□□□ 0.13
LIG1-208ENST00000595758 DSC3Q14574 896 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 PCBP1Q15365 356 aaKnown RBP eCLIP15.87■□□□□ 0.13
LIG1-208ENST00000595758 E2F4Q16254 413 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 CDCA2Q69YH5 1023 aaPredicted RBP15.87■□□□□ 0.13
LIG1-208ENST00000595758 TMCO2Q7Z6W1 182 aaPredicted RBP15.87■□□□□ 0.13
LIG1-208ENST00000595758 DHX58Q96C10 678 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 REEP2Q9BRK0 252 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 ZBED2Q9BTP6 218 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 C2orf40Q9H1Z8 148 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 CUEDC2Q9H467 287 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 C17orf75Q9HAS0 396 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 CHST12Q9NRB3 414 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 RGS18Q9NS28 235 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 C1orf112Q9NSG2 853 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 KCNG1Q9UIX4 513 aa15.87■□□□□ 0.13
LIG1-208ENST00000595758 KCNH3Q9ULD8 1083 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms