RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TRIP11Q15643 1979 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 ODR4Q5SWX8 454 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 FAM43BQ6ZT52 329 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 SLC24A5Q71RS6 500 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 BRAPQ7Z569 592 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 EXOC8Q8IYI6 725 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 ERMNQ8TAM6 284 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 ASAP3Q8TDY4 903 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 GDPD5Q8WTR4 605 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 NACC1Q96RE7 527 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 ATP6V0A4Q9HBG4 840 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 C1orf112Q9NSG2 853 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 MTMR6Q9Y217 621 aa12.24□□□□□ -0.45
SHKBP1-206ENST00000595523 BDP1A6H8Y1 2624 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 USO1O60763 962 aaKnown RBP12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 SRGAP2CP0DJJ0 459 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 ATF7P17544 494 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 POU3F3P20264 500 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 MUTP22033 750 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 GLRA2P23416 452 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 ARL2P36404 184 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 CAPSQ13938 189 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 EPC2Q52LR7 807 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 HAUS3Q68CZ6 603 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 FAM173BQ6P4H8 233 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 DTHD1Q6ZMT9 781 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 KCNK18Q7Z418 384 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 SNX29Q8TEQ0 813 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 TCP11Q8WWU5 503 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 GPRC5CQ9NQ84 441 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 RNF19AQ9NV58 838 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 KIAA1024Q9UPX6 916 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 MTCH2Q9Y6C9 303 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 TCHHQ07283 1943 aa12.23□□□□□ -0.45
SHKBP1-206ENST00000595523 VWA3AA6NCI4 1184 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 STAG3L1P0CL83 205 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 FGFR1P11362 822 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 IBSPP21815 317 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 IGFBP4P22692 258 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 SFPQP23246 707 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 GRIN1Q05586 938 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 BTG3Q14201 252 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 FAM102BQ5T8I3 360 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 ARL6IP4Q66PJ3 421 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 ZNF598Q86UK7 904 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 TMEM192Q8IY95 271 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 CMTR2Q8IYT2 770 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 FIBCD1Q8N539 461 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 RNF149Q8NC42 400 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 FBXO22Q8NEZ5 403 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 CLP1Q92989 425 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 RAB34Q9BZG1 259 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 POLR3FQ9H1D9 316 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 DDX19AQ9NUU7 478 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 TMEM161AQ9NX61 479 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 HCSTQ9UBK5 93 aa12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 MRPL42Q9Y6G3 142 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-206ENST00000595523 A0A0U1RQF3 1178 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 E9PMD0 336 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 ASAP2O43150 1006 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 STX6O43752 255 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 ZSCAN20P17040 1043 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 HOXA11P31270 313 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 PTENP60484 403 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 MBTD1Q05BQ5 628 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 MXD4Q14582 209 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 PTPAQ15257 358 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 SF3A1Q15459 793 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 AMHR2Q16671 573 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 PAN2Q504Q3 1202 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 HYIQ5T013 277 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 PADI6Q6TGC4 694 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 MAEAQ7L5Y9 396 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 CATSPER4Q7RTX7 472 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 SRGAP1Q7Z6B7 1085 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 ECHDC2Q86YB7 292 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 HSCBQ8IWL3 235 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 BSNDQ8WZ55 320 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 CCDC43Q96MW1 224 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 SAMD11Q96NU1 681 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 PNMA5Q96PV4 448 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 TRAIPQ9BWF2 469 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 INO80BQ9C086 356 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 BHMT2Q9H2M3 363 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 ELAC1Q9H777 363 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 PRDM6Q9NQX0 595 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 CHST12Q9NRB3 414 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 AGPAT5Q9NUQ2 364 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 LRFN2Q9ULH4 789 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 PIN4Q9Y237 131 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 PCDHB7Q9Y5E2 793 aa12.21□□□□□ -0.45
SHKBP1-206ENST00000595523 ARHGEF35A5YM69 484 aa12.2□□□□□ -0.46
SHKBP1-206ENST00000595523 C5orf67F2Z3F1 127 aa12.2□□□□□ -0.46
SHKBP1-206ENST00000595523 H3BNC9 293 aa12.2□□□□□ -0.46
SHKBP1-206ENST00000595523 CYP11B2P19099 503 aa12.2□□□□□ -0.46
SHKBP1-206ENST00000595523 BMPR1AP36894 532 aa12.2□□□□□ -0.46
SHKBP1-206ENST00000595523 PHKA2P46019 1235 aa12.2□□□□□ -0.46
SHKBP1-206ENST00000595523 POU5F1BQ06416 359 aa12.2□□□□□ -0.46
SHKBP1-206ENST00000595523 CCDC85BQ15834 202 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms