RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 FOXD4L5Q5VV16 416 aaPredicted RBP24.35■■□□□ 1.49
HOMER3-206ENST00000594439 NPAS4Q8IUM7 802 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 RNF149Q8NC42 400 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 FOXD4L4Q8WXT5 416 aaPredicted RBP24.35■■□□□ 1.49
HOMER3-206ENST00000594439 CDX2Q99626 313 aaPredicted RBP24.35■■□□□ 1.49
HOMER3-206ENST00000594439 GPRC5CQ9NQ84 441 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 C1orf112Q9NSG2 853 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 DNM3Q9UQ16 869 aa24.35■■□□□ 1.49
HOMER3-206ENST00000594439 MORC2Q9Y6X9 1032 aaPredicted RBP24.35■■□□□ 1.49
HOMER3-206ENST00000594439 F13A1P00488 732 aa24.34■■□□□ 1.49
HOMER3-206ENST00000594439 SFPQP23246 707 aaKnown RBP eCLIP24.34■■□□□ 1.49
HOMER3-206ENST00000594439 MARCKSP29966 332 aaPredicted RBP24.34■■□□□ 1.49
HOMER3-206ENST00000594439 SARSP49591 514 aaKnown RBP24.34■■□□□ 1.49
HOMER3-206ENST00000594439 CAPSQ13938 189 aa24.34■■□□□ 1.49
HOMER3-206ENST00000594439 MAEAQ7L5Y9 396 aa24.34■■□□□ 1.49
HOMER3-206ENST00000594439 SPRED2Q7Z698 418 aa24.34■■□□□ 1.49
HOMER3-206ENST00000594439 SRGAP1Q7Z6B7 1085 aa24.34■■□□□ 1.49
HOMER3-206ENST00000594439 CABP7Q86V35 215 aa24.34■■□□□ 1.49
HOMER3-206ENST00000594439 YME1L1Q96TA2 773 aa24.34■■□□□ 1.49
HOMER3-206ENST00000594439 MINDY3Q9H8M7 445 aa24.34■■□□□ 1.49
HOMER3-206ENST00000594439 RC3H2Q9HBD1 1191 aaKnown RBP24.34■■□□□ 1.49
HOMER3-206ENST00000594439 FBXO2Q9UK22 296 aaPredicted RBP24.34■■□□□ 1.49
HOMER3-206ENST00000594439 LINC01553A4QN01 128 aa24.33■■□□□ 1.49
HOMER3-206ENST00000594439 SLC26A4O43511 780 aa24.33■■□□□ 1.49
HOMER3-206ENST00000594439 NASPP49321 788 aaPredicted RBP24.33■■□□□ 1.49
HOMER3-206ENST00000594439 PTENP60484 403 aa24.33■■□□□ 1.49
HOMER3-206ENST00000594439 FAM189BP81408 668 aa24.33■■□□□ 1.49
HOMER3-206ENST00000594439 POU5F1BQ06416 359 aa24.33■■□□□ 1.49
HOMER3-206ENST00000594439 SLC39A14Q15043 492 aa24.33■■□□□ 1.49
HOMER3-206ENST00000594439 ZRSR1Q15695 479 aaKnown RBP24.33■■□□□ 1.49
HOMER3-206ENST00000594439 TMEM119Q4V9L6 283 aa24.33■■□□□ 1.49
HOMER3-206ENST00000594439 SLC24A5Q71RS6 500 aa24.33■■□□□ 1.49
HOMER3-206ENST00000594439 IFNLR1Q8IU57 520 aaPredicted RBP24.33■■□□□ 1.49
HOMER3-206ENST00000594439 KCTD17Q8N5Z5 321 aa24.33■■□□□ 1.49
HOMER3-206ENST00000594439 NT5C3AQ9H0P0 336 aa24.33■■□□□ 1.49
HOMER3-206ENST00000594439 SRPRBQ9Y5M8 271 aaKnown RBP24.33■■□□□ 1.49
HOMER3-206ENST00000594439 DGKIO75912 1065 aa24.32■■□□□ 1.48
HOMER3-206ENST00000594439 STAG3L1P0CL83 205 aa24.32■■□□□ 1.48
HOMER3-206ENST00000594439 ZSCAN20P17040 1043 aaPredicted RBP24.32■■□□□ 1.48
HOMER3-206ENST00000594439 PHKA2P46019 1235 aa24.32■■□□□ 1.48
HOMER3-206ENST00000594439 TFDP1Q14186 410 aa24.32■■□□□ 1.48
HOMER3-206ENST00000594439 FAM102BQ5T8I3 360 aa24.32■■□□□ 1.48
HOMER3-206ENST00000594439 CATSPER4Q7RTX7 472 aa24.32■■□□□ 1.48
HOMER3-206ENST00000594439 MYLIPQ8WY64 445 aa24.32■■□□□ 1.48
HOMER3-206ENST00000594439 ZNF689Q96CS4 500 aaPredicted RBP24.32■■□□□ 1.48
HOMER3-206ENST00000594439 PLIN2Q99541 437 aa24.32■■□□□ 1.48
HOMER3-206ENST00000594439 PRDM12Q9H4Q4 367 aa24.32■■□□□ 1.48
HOMER3-206ENST00000594439 CHST12Q9NRB3 414 aa24.32■■□□□ 1.48
HOMER3-206ENST00000594439 CHD9Q3L8U1 2897 aa24.32■■□□□ 1.48
HOMER3-206ENST00000594439 UBA7P41226 1012 aa24.31■■□□□ 1.48
HOMER3-206ENST00000594439 BECN1Q14457 450 aa24.31■■□□□ 1.48
HOMER3-206ENST00000594439 ZNF396Q96N95 335 aaPredicted RBP24.31■■□□□ 1.48
HOMER3-206ENST00000594439 CSRNP2Q9H175 543 aa24.31■■□□□ 1.48
HOMER3-206ENST00000594439 CERS4Q9HA82 394 aa24.31■■□□□ 1.48
HOMER3-206ENST00000594439 USP49Q70CQ1 688 aa24.3■■□□□ 1.48
HOMER3-206ENST00000594439 BSNDQ8WZ55 320 aa24.3■■□□□ 1.48
HOMER3-206ENST00000594439 CDK5RAP3Q96JB5 506 aa24.3■■□□□ 1.48
HOMER3-206ENST00000594439 NFKBIZQ9BYH8 718 aa24.3■■□□□ 1.48
HOMER3-206ENST00000594439 TFIP11Q9UBB9 837 aaKnown RBP24.3■■□□□ 1.48
HOMER3-206ENST00000594439 LRFN2Q9ULH4 789 aa24.3■■□□□ 1.48
HOMER3-206ENST00000594439 NLRC5Q86WI3 1866 aa24.3■■□□□ 1.48
HOMER3-206ENST00000594439 IBSPP21815 317 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-206ENST00000594439 ERVK-21P61565 698 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 RINT1Q6NUQ1 792 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 C1orf186Q6ZWK4 172 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 LINC00301Q8NCQ3 95 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 LRRC15Q8TF66 581 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 CALML4Q96GE6 196 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 CLIC6Q96NY7 704 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 TGS1Q96RS0 853 aaKnown RBP24.29■■□□□ 1.48
HOMER3-206ENST00000594439 RUSC1Q9BVN2 902 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 CCSER1Q9C0I3 900 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 ELAC1Q9H777 363 aaKnown RBP24.29■■□□□ 1.48
HOMER3-206ENST00000594439 POLD4Q9HCU8 107 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 AGPAT5Q9NUQ2 364 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 TMEM161AQ9NX61 479 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 DACT1Q9NYF0 836 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 PIN4Q9Y237 131 aaKnown RBP24.29■■□□□ 1.48
HOMER3-206ENST00000594439 STXBP5LQ9Y2K9 1186 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 PCDHB7Q9Y5E2 793 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 FNDC1Q4ZHG4 1894 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-206ENST00000594439 ADGRA3Q8IWK6 1321 aa24.29■■□□□ 1.48
HOMER3-206ENST00000594439 EPOPA6NHQ4 379 aa24.28■■□□□ 1.48
HOMER3-206ENST00000594439 GATMP50440 423 aa24.28■■□□□ 1.48
HOMER3-206ENST00000594439 MBTD1Q05BQ5 628 aa24.28■■□□□ 1.48
HOMER3-206ENST00000594439 KARSQ15046 597 aaKnown RBP24.28■■□□□ 1.48
HOMER3-206ENST00000594439 STK38Q15208 465 aa24.28■■□□□ 1.48
HOMER3-206ENST00000594439 SPECC1Q5M775 1068 aa24.28■■□□□ 1.48
HOMER3-206ENST00000594439 ECHDC2Q86YB7 292 aa24.28■■□□□ 1.48
HOMER3-206ENST00000594439 SYT2Q8N9I0 419 aaPredicted RBP24.28■■□□□ 1.48
HOMER3-206ENST00000594439 ARNTL2Q8WYA1 636 aa24.28■■□□□ 1.48
HOMER3-206ENST00000594439 EPSTI1Q96J88 318 aa24.28■■□□□ 1.48
HOMER3-206ENST00000594439 TRAIPQ9BWF2 469 aa24.28■■□□□ 1.48
HOMER3-206ENST00000594439 RNF216Q9NWF9 866 aaPredicted RBP24.28■■□□□ 1.48
HOMER3-206ENST00000594439 ZDHHC9Q9Y397 364 aa24.28■■□□□ 1.48
HOMER3-206ENST00000594439 RALGAPA2Q2PPJ7 1873 aa24.28■■□□□ 1.48
HOMER3-206ENST00000594439 A0A0U1RQF3 1178 aa24.27■■□□□ 1.48
HOMER3-206ENST00000594439 LRRIQ4A6NIV6 560 aa24.27■■□□□ 1.48
HOMER3-206ENST00000594439 BRD1O95696 1058 aa24.27■■□□□ 1.48
HOMER3-206ENST00000594439 PLA2G4BP0C869 781 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms