RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 FKBP3Q00688 224 aaKnown RBP14.53□□□□□ -0.08
VRK3-205ENST00000593919 TBX2Q13207 712 aaPredicted RBP14.53□□□□□ -0.08
VRK3-205ENST00000593919 EDRF1Q3B7T1 1238 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 SPECC1LQ69YQ0 1117 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 TLK2Q86UE8 772 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 CCDC112Q8NEF3 446 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 ANKRD20A12PQ8NF67 263 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 TMEM143Q96AN5 459 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 C16orf70Q9BSU1 422 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 IKZF4Q9H2S9 585 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 RNPEPQ9H4A4 650 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 TYW1Q9NV66 732 aaKnown RBP14.53□□□□□ -0.08
VRK3-205ENST00000593919 MAGEC2Q9UBF1 373 aaPredicted RBP14.53□□□□□ -0.08
VRK3-205ENST00000593919 TRAF3IP3Q9Y228 551 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 PAXBP1Q9Y5B6 917 aa14.53□□□□□ -0.08
VRK3-205ENST00000593919 DYNC1LI2O43237 492 aaPredicted RBP14.52□□□□□ -0.09
VRK3-205ENST00000593919 HBP1O60381 514 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 KCNJ6P48051 423 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 RTP1P59025 263 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 TBC1D8BQ0IIM8 1120 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 ALCAMQ13740 583 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 HSP90AA2PQ14568 343 aaPredicted RBP14.52□□□□□ -0.09
VRK3-205ENST00000593919 DGKDQ16760 1214 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 HAUS6Q7Z4H7 955 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 FAM114A1Q8IWE2 563 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 KIFC3Q9BVG8 833 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 ZMYND15Q9H091 742 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 ST6GALNAC4Q9H4F1 302 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 TAB2Q9NYJ8 693 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 PPME1Q9Y570 386 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 SIP14410 1827 aa14.52□□□□□ -0.09
VRK3-205ENST00000593919 CCDC169A6NNP5 214 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 TGFB1I1O43294 461 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 MAFO75444 373 aaPredicted RBP14.51□□□□□ -0.09
VRK3-205ENST00000593919 FGFR1OPO95684 399 aaKnown RBP14.51□□□□□ -0.09
VRK3-205ENST00000593919 COPB1P53618 953 aaKnown RBP14.51□□□□□ -0.09
VRK3-205ENST00000593919 SMTNP53814 917 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 ADKP55263 362 aaKnown RBP14.51□□□□□ -0.09
VRK3-205ENST00000593919 NR1I3Q14994 352 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 ZC3H3Q8IXZ2 948 aaKnown RBP14.51□□□□□ -0.09
VRK3-205ENST00000593919 TMEM161BQ8NDZ6 487 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 TRPV1Q8NER1 839 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 CD99L2Q8TCZ2 262 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 TRAPPC12Q8WVT3 735 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 VPS16Q9H269 839 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 TMX1Q9H3N1 280 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 FAM184BQ9ULE4 1060 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 ADGRA3Q8IWK6 1321 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 A6NJR5 290 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 H3BRB1 525 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 TEX33O43247 280 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 RRP9O43818 475 aaKnown RBP14.51□□□□□ -0.09
VRK3-205ENST00000593919 CALUO43852 315 aaPredicted RBP14.51□□□□□ -0.09
VRK3-205ENST00000593919 CYBAP13498 195 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 NR2F2P24468 414 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 IRX5P78411 483 aaPredicted RBP14.51□□□□□ -0.09
VRK3-205ENST00000593919 GTF2BQ00403 316 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 MFSD14CQ5VZR4 134 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 SLC17A8Q8NDX2 589 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 SPIRE2Q8WWL2 714 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 IFT74Q96LB3 600 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 CEP63Q96MT8 703 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 NTPCRQ9BSD7 190 aaKnown RBP14.51□□□□□ -0.09
VRK3-205ENST00000593919 TUT1Q9H6E5 874 aaKnown RBP14.51□□□□□ -0.09
VRK3-205ENST00000593919 KMT5AQ9NQR1 393 aa14.51□□□□□ -0.09
VRK3-205ENST00000593919 ZNF215Q9UL58 517 aaPredicted RBP14.51□□□□□ -0.09
VRK3-205ENST00000593919 TRIP12Q14669 1992 aaPredicted RBP14.5□□□□□ -0.09
VRK3-205ENST00000593919 GPR25O00155 361 aa14.5□□□□□ -0.09
VRK3-205ENST00000593919 N4BP3O15049 544 aa14.5□□□□□ -0.09
VRK3-205ENST00000593919 AKR1A1P14550 325 aa14.5□□□□□ -0.09
VRK3-205ENST00000593919 ARL2P36404 184 aa14.5□□□□□ -0.09
VRK3-205ENST00000593919 ADAM9Q13443 819 aa14.5□□□□□ -0.09
VRK3-205ENST00000593919 DRP2Q13474 957 aa14.5□□□□□ -0.09
VRK3-205ENST00000593919 GLIPR1L2Q4G1C9 344 aa14.5□□□□□ -0.09
VRK3-205ENST00000593919 FILIP1LQ4L180 1135 aa14.5□□□□□ -0.09
VRK3-205ENST00000593919 ASAP3Q8TDY4 903 aa14.5□□□□□ -0.09
VRK3-205ENST00000593919 TUBGCP2Q9BSJ2 902 aa14.5□□□□□ -0.09
VRK3-205ENST00000593919 GBP3Q9H0R5 595 aa14.5□□□□□ -0.09
VRK3-205ENST00000593919 CLIC2O15247 247 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 NR3C1P04150 777 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 INSRRP14616 1297 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 GLRA2P23416 452 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 MTIF2P46199 727 aaKnown RBP14.49□□□□□ -0.09
VRK3-205ENST00000593919 TRIM32Q13049 653 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 HS2ST1Q7LGA3 356 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 TMEM139Q8IV31 216 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 SYCP3Q8IZU3 236 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 TC2NQ8N9U0 490 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 SRRDQ9UH36 339 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 IGKV6-21A0A0C4DH24 114 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 DENND3A2RUS2 1198 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 CETN3O15182 167 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 GAS2O43903 313 aaKnown RBP14.49□□□□□ -0.09
VRK3-205ENST00000593919 IGBP1P78318 339 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 ZNF710Q8N1W2 664 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 LRRC71Q8N4P6 559 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 ZBTB10Q96DT7 871 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 ACCSQ96QU6 501 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 BAG1Q99933 345 aaPredicted RBP14.49□□□□□ -0.09
VRK3-205ENST00000593919 TMEM206Q9H813 350 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms