RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 NHLH1Q02575 133 aa25.47■■□□□ 1.67
SSBP4-203ENST00000593641 DRP2Q13474 957 aa25.47■■□□□ 1.67
SSBP4-203ENST00000593641 KCNC3Q14003 757 aa25.47■■□□□ 1.67
SSBP4-203ENST00000593641 ZNF598Q86UK7 904 aaKnown RBP25.47■■□□□ 1.67
SSBP4-203ENST00000593641 ZSWIM6Q9HCJ5 1215 aa25.47■■□□□ 1.67
SSBP4-203ENST00000593641 EPB41L2O43491 1005 aaKnown RBP25.46■■□□□ 1.67
SSBP4-203ENST00000593641 HOXB8P17481 243 aaPredicted RBP25.46■■□□□ 1.67
SSBP4-203ENST00000593641 ALDH7A1P49419 539 aaKnown RBP25.46■■□□□ 1.67
SSBP4-203ENST00000593641 ZXDAP98168 799 aa25.46■■□□□ 1.67
SSBP4-203ENST00000593641 SMC1AQ14683 1233 aaKnown RBP25.46■■□□□ 1.67
SSBP4-203ENST00000593641 BMS1Q14692 1282 aaKnown RBP25.46■■□□□ 1.67
SSBP4-203ENST00000593641 GALNT17Q6IS24 598 aa25.46■■□□□ 1.67
SSBP4-203ENST00000593641 MOXD1Q6UVY6 613 aa25.46■■□□□ 1.67
SSBP4-203ENST00000593641 BMP8AQ7Z5Y6 402 aa25.46■■□□□ 1.67
SSBP4-203ENST00000593641 FAM177A1Q8N128 213 aaPredicted RBP25.46■■□□□ 1.67
SSBP4-203ENST00000593641 SLC39A11Q8N1S5 342 aa25.46■■□□□ 1.67
SSBP4-203ENST00000593641 RSPH1Q8WYR4 309 aa25.46■■□□□ 1.67
SSBP4-203ENST00000593641 CASP10Q92851 521 aa25.46■■□□□ 1.67
SSBP4-203ENST00000593641 PBXIP1Q96AQ6 731 aa25.46■■□□□ 1.67
SSBP4-203ENST00000593641 ZNF274Q96GC6 653 aaPredicted RBP25.46■■□□□ 1.67
SSBP4-203ENST00000593641 CHST12Q9NRB3 414 aa25.46■■□□□ 1.67
SSBP4-203ENST00000593641 CSDE1O75534 798 aaKnown RBP25.45■■□□□ 1.66
SSBP4-203ENST00000593641 CA8P35219 290 aa25.45■■□□□ 1.66
SSBP4-203ENST00000593641 NONOQ15233 471 aaKnown RBP eCLIP25.45■■□□□ 1.66
SSBP4-203ENST00000593641 TWF2Q6IBS0 349 aaKnown RBP25.45■■□□□ 1.66
SSBP4-203ENST00000593641 SUGP1Q8IWZ8 645 aaKnown RBP25.45■■□□□ 1.66
SSBP4-203ENST00000593641 DAGLBQ8NCG7 672 aa25.45■■□□□ 1.66
SSBP4-203ENST00000593641 APOL5Q9BWW9 433 aa25.45■■□□□ 1.66
SSBP4-203ENST00000593641 INO80BQ9C086 356 aaPredicted RBP25.45■■□□□ 1.66
SSBP4-203ENST00000593641 DDX25Q9UHL0 483 aaKnown RBP25.45■■□□□ 1.66
SSBP4-203ENST00000593641 A0A087WZ62 844 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 IGKV6-21A0A0C4DH24 114 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 TMEM150BA6NC51 233 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 M0R2N6 131 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 SYCE2Q6PIF2 218 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 B3GNT9Q6UX72 402 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 ZNF410Q86VK4 478 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 RHPN2Q8IUC4 686 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 ETNPPLQ8TBG4 499 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 TMEM169Q96HH4 297 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 JPH2Q9BR39 696 aaPredicted RBP25.44■■□□□ 1.66
SSBP4-203ENST00000593641 SH2D3AQ9BRG2 576 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 FDXACB1Q9BRP7 624 aaPredicted RBP25.44■■□□□ 1.66
SSBP4-203ENST00000593641 S1PR5Q9H228 398 aa25.44■■□□□ 1.66
SSBP4-203ENST00000593641 DDX11L8A8MPP1 907 aa25.43■■□□□ 1.66
SSBP4-203ENST00000593641 SKIP12755 728 aa25.43■■□□□ 1.66
SSBP4-203ENST00000593641 PHKA2P46019 1235 aa25.43■■□□□ 1.66
SSBP4-203ENST00000593641 BCAR1P56945 870 aa25.43■■□□□ 1.66
SSBP4-203ENST00000593641 PSMC5P62195 406 aa25.43■■□□□ 1.66
SSBP4-203ENST00000593641 STK3Q13188 491 aa25.43■■□□□ 1.66
SSBP4-203ENST00000593641 TPRNQ4KMQ1 711 aa25.43■■□□□ 1.66
SSBP4-203ENST00000593641 KRT25Q7Z3Z0 450 aa25.43■■□□□ 1.66
SSBP4-203ENST00000593641 MBOAT7Q96N66 472 aa25.43■■□□□ 1.66
SSBP4-203ENST00000593641 CEP89Q96ST8 783 aa25.43■■□□□ 1.66
SSBP4-203ENST00000593641 SUCLA2Q9P2R7 463 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-203ENST00000593641 PIN4Q9Y237 131 aaKnown RBP25.43■■□□□ 1.66
SSBP4-203ENST00000593641 MYO10Q9HD67 2058 aa25.42■■□□□ 1.66
SSBP4-203ENST00000593641 CARNS1A5YM72 827 aa25.42■■□□□ 1.66
SSBP4-203ENST00000593641 STBD1O95210 358 aa25.42■■□□□ 1.66
SSBP4-203ENST00000593641 MRE11P49959 708 aa25.42■■□□□ 1.66
SSBP4-203ENST00000593641 SIGLEC14Q08ET2 396 aa25.42■■□□□ 1.66
SSBP4-203ENST00000593641 INF2Q27J81 1249 aa25.42■■□□□ 1.66
SSBP4-203ENST00000593641 MRPL43Q8N983 215 aaKnown RBP25.42■■□□□ 1.66
SSBP4-203ENST00000593641 NLRP4Q96MN2 994 aa25.42■■□□□ 1.66
SSBP4-203ENST00000593641 TRAIPQ9BWF2 469 aa25.42■■□□□ 1.66
SSBP4-203ENST00000593641 HCFC2Q9Y5Z7 792 aa25.42■■□□□ 1.66
SSBP4-203ENST00000593641 C2orf71A6NGG8 1288 aa25.41■■□□□ 1.66
SSBP4-203ENST00000593641 NT5C1B-RDH14C9J2C7 533 aa25.41■■□□□ 1.66
SSBP4-203ENST00000593641 ZC3H11AO75152 810 aaKnown RBP eCLIP25.41■■□□□ 1.66
SSBP4-203ENST00000593641 MAFO75444 373 aaPredicted RBP25.41■■□□□ 1.66
SSBP4-203ENST00000593641 NPY5RQ15761 445 aa25.41■■□□□ 1.66
SSBP4-203ENST00000593641 LETM2Q2VYF4 491 aa25.41■■□□□ 1.66
SSBP4-203ENST00000593641 CES5AQ6NT32 575 aa25.41■■□□□ 1.66
SSBP4-203ENST00000593641 CATSPER4Q7RTX7 472 aa25.41■■□□□ 1.66
SSBP4-203ENST00000593641 ZBTB33Q86T24 672 aa25.41■■□□□ 1.66
SSBP4-203ENST00000593641 TMEM87AQ8NBN3 555 aa25.41■■□□□ 1.66
SSBP4-203ENST00000593641 AIFM3Q96NN9 605 aa25.41■■□□□ 1.66
SSBP4-203ENST00000593641 LARP6Q9BRS8 491 aaKnown RBP25.41■■□□□ 1.66
SSBP4-203ENST00000593641 TM6SF1Q9BZW5 370 aa25.41■■□□□ 1.66
SSBP4-203ENST00000593641 NR2E1Q9Y466 385 aa25.41■■□□□ 1.66
SSBP4-203ENST00000593641 CCDC194A0A1B0GVG4 234 aa25.4■■□□□ 1.66
SSBP4-203ENST00000593641 DKC1O60832 514 aaKnown RBP eCLIP25.4■■□□□ 1.66
SSBP4-203ENST00000593641 CDKL5O76039 1030 aa25.4■■□□□ 1.66
SSBP4-203ENST00000593641 RAB27AP51159 221 aa25.4■■□□□ 1.66
SSBP4-203ENST00000593641 PTPN21Q16825 1174 aa25.4■■□□□ 1.66
SSBP4-203ENST00000593641 PLA2G4FQ68DD2 849 aa25.4■■□□□ 1.66
SSBP4-203ENST00000593641 GLB1LQ6UWU2 654 aa25.4■■□□□ 1.66
SSBP4-203ENST00000593641 SLKQ9H2G2 1235 aaPredicted RBP25.4■■□□□ 1.66
SSBP4-203ENST00000593641 TSHZ2Q9NRE2 1034 aa25.4■■□□□ 1.66
SSBP4-203ENST00000593641 FAM105AQ9NUU6 356 aa25.4■■□□□ 1.66
SSBP4-203ENST00000593641 KMT2EQ8IZD2 1858 aa25.39■■□□□ 1.66
SSBP4-203ENST00000593641 SLC37A4O43826 429 aa25.39■■□□□ 1.66
SSBP4-203ENST00000593641 SP100P23497 879 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-203ENST00000593641 QARSP47897 775 aaKnown RBP25.39■■□□□ 1.66
SSBP4-203ENST00000593641 ITIH3Q06033 890 aa25.39■■□□□ 1.66
SSBP4-203ENST00000593641 ANO5Q75V66 913 aa25.39■■□□□ 1.66
SSBP4-203ENST00000593641 SLC7A3Q8WY07 619 aa25.39■■□□□ 1.66
SSBP4-203ENST00000593641 LPPQ93052 612 aa25.39■■□□□ 1.66
SSBP4-203ENST00000593641 NECTIN4Q96NY8 510 aa25.39■■□□□ 1.66
SSBP4-203ENST00000593641 PRRX2Q99811 253 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms