RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 NAMPTP43490 491 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 SMTNP53814 917 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 PURAQ00577 322 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 MKRN4PQ13434 485 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 MFSD10Q14728 455 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 PPP2R5AQ15172 486 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 GRIK4Q16099 956 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 TPD52L1Q16890 204 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 KIAA0753Q2KHM9 967 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 EDRF1Q3B7T1 1238 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 ZC2HC1CQ53FD0 456 aaPredicted RBP12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 IER5Q5VY09 327 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 HAUS6Q7Z4H7 955 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 TMEM161BQ8NDZ6 487 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 ASAP3Q8TDY4 903 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 TCP11Q8WWU5 503 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 TMEM143Q96AN5 459 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 IFT74Q96LB3 600 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 TSG101Q99816 390 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 KATNAL1Q9BW62 490 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 SPC25Q9HBM1 224 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 XPNPEP3Q9NQH7 507 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 KMT5AQ9NQR1 393 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 TYW1Q9NV66 732 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 ARHGAP28Q9P2N2 729 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 DDX20Q9UHI6 824 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 KCNG1Q9UIX4 513 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 TRAF3IP3Q9Y228 551 aa12.7□□□□□ -0.38
CACNA1A-213ENST00000593267 ADGRA3Q8IWK6 1321 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 H0YCG3 227 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 SLC16A4O15374 487 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 MAGEB2O15479 319 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 PGK1P00558 417 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 ABCD1P33897 745 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 PSEN2P49810 448 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 KCNA1Q09470 495 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 PPFIA1Q13136 1202 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 DRP2Q13474 957 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 NFIL3Q16649 462 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 MTHFD1LQ6UB35 978 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 IRF2BP1Q8IU81 584 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 CSGALNACT2Q8N6G5 542 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 KLHDC9Q8NEP7 349 aa12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 ANP32BQ92688 251 aaKnown RBP12.69□□□□□ -0.38
CACNA1A-213ENST00000593267 NRCAMQ92823 1304 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 RRN3P2A6NIE6 340 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 CCDC169A6NNP5 214 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 TGFB1I1O43294 461 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 CALUO43852 315 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 ZEB2O60315 1214 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 MSCO60682 206 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 ADCY5O95622 1261 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 SMIM10L2AP0DMW4 78 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 SMIM10L2BP0DMW5 78 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 KLRC1P26715 233 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 HOXC8P31273 242 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 DEKP35659 375 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 FXR1P51114 621 aaKnown RBP eCLIP12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 IGBP1P78318 339 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 FANCCQ00597 558 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 PLCB2Q00722 1185 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 SPAG1Q07617 926 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 CAPSQ13938 189 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 MXD4Q14582 209 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 GNASQ5JWF2 1037 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 MARCH8Q5T0T0 291 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 CCSAPQ6IQ19 270 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 EFCAB12Q6NXP0 572 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 MAP4K3Q8IVH8 894 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 KSR1Q8IVT5 923 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 LRRC71Q8N4P6 559 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 RETREG2Q8NC44 543 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 SH3TC2Q8TF17 1288 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 LMBR1Q8WVP7 490 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 PSPC1Q8WXF1 523 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 PDLIM2Q96JY6 352 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 ACCSQ96QU6 501 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 MTG1Q9BT17 334 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 KIFC3Q9BVG8 833 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 SRRTQ9BXP5 876 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 TMEM206Q9H813 350 aa12.68□□□□□ -0.38
CACNA1A-213ENST00000593267 KAT6AQ92794 2004 aa12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 EVPLQ92817 2033 aa12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 PHLPP2Q6ZVD8 1323 aa12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 DENND3A2RUS2 1198 aa12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 MBLAC1A4D2B0 266 aaPredicted RBP12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 KCNJ18B7U540 433 aa12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 FGFR1OPO95684 399 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 CDK11BP21127 795 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 EEF1GP26641 437 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 DNM2P50570 870 aa12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 CLCN3P51790 818 aa12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 ZNF75DP51815 510 aa12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 SNRPFP62306 86 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 ADAM17P78536 824 aa12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 FKBP3Q00688 224 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 KCNJ12Q14500 433 aa12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 HSP90AA4PQ58FG1 418 aa12.67□□□□□ -0.38
CACNA1A-213ENST00000593267 TCP11X2Q5H9J9 407 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms