RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 FAM178BQ8IXR5 827 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 EXOC8Q8IYI6 725 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 GLIS3Q8NEA6 775 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 OR6J1Q8NGC5 347 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 KIFAP3Q92845 792 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 PDLIM2Q96JY6 352 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 FIZ1Q96SL8 496 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 SH2D3AQ9BRG2 576 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 TRIM5Q9C035 493 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 DHX33Q9H6R0 707 aaKnown RBP14.85□□□□□ -0.03
VMP1-217ENST00000593168 ATP6V0A4Q9HBG4 840 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 POLD4Q9HCU8 107 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 ERAP1Q9NZ08 941 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 FAM184BQ9ULE4 1060 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 PHF24Q9UPV7 400 aa14.85□□□□□ -0.03
VMP1-217ENST00000593168 TRIM49BA6NDI0 452 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 A6NJR5 290 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 HBP1O60381 514 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 LGALS2P05162 132 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 ZNF75DP51815 510 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 SPAG1Q07617 926 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 ALCAMQ13740 583 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 PLCB4Q15147 1175 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 MTERF2Q49AM1 385 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 ODR4Q5SWX8 454 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 ANKRD40Q6AI12 368 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 MAEAQ7L5Y9 396 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 RNPC3Q96LT9 517 aaKnown RBP14.84□□□□□ -0.03
VMP1-217ENST00000593168 TSG101Q99816 390 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 DUSP9Q99956 384 aaKnown RBP14.84□□□□□ -0.03
VMP1-217ENST00000593168 NTPCRQ9BSD7 190 aaKnown RBP14.84□□□□□ -0.03
VMP1-217ENST00000593168 FGFBP2Q9BYJ0 223 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 ST6GALNAC4Q9H4F1 302 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 THAP9Q9H5L6 903 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 XPNPEP3Q9NQH7 507 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 XPNPEP1Q9NQW7 623 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 SAMSN1Q9NSI8 373 aaKnown RBP14.84□□□□□ -0.03
VMP1-217ENST00000593168 PCDHB13Q9Y5F0 798 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 UBE4BO95155 1302 aa14.84□□□□□ -0.03
VMP1-217ENST00000593168 ARID2Q68CP9 1835 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 DYNC1LI2O43237 492 aaPredicted RBP14.83□□□□□ -0.04
VMP1-217ENST00000593168 ADCY6O43306 1168 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 MAFO75444 373 aaPredicted RBP14.83□□□□□ -0.04
VMP1-217ENST00000593168 GCNT3O95395 438 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 FGFR1OPO95684 399 aaKnown RBP14.83□□□□□ -0.04
VMP1-217ENST00000593168 PGK1P00558 417 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 CLTBP09497 229 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 MYBP10242 640 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 ATP1A3P13637 1013 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 AKR1A1P14550 325 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 CDK11BP21127 795 aaKnown RBP14.83□□□□□ -0.04
VMP1-217ENST00000593168 PTGS1P23219 599 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 CASP5P51878 434 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 POLGP54098 1239 aaPredicted RBP14.83□□□□□ -0.04
VMP1-217ENST00000593168 FANCCQ00597 558 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 DGKDQ16760 1214 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 FAM102BQ5T8I3 360 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 TRIM50Q86XT4 487 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 SPIRE2Q8WWL2 714 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 SLC7A3Q8WY07 619 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 MRFAP1L1Q96HT8 127 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 STRA6Q9BX79 667 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 SRRTQ9BXP5 876 aaKnown RBP14.83□□□□□ -0.04
VMP1-217ENST00000593168 KCTD10Q9H3F6 313 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 MYH11P35749 1972 aa14.83□□□□□ -0.04
VMP1-217ENST00000593168 TMEM265A0A087WTH1 108 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 LRRC10BA6NIK2 292 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 PDXKO00764 312 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 KIAA0355O15063 1070 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 GAS2O43903 313 aaKnown RBP14.82□□□□□ -0.04
VMP1-217ENST00000593168 PPP1R37O75864 691 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 PRPF6O94906 941 aaKnown RBP14.82□□□□□ -0.04
VMP1-217ENST00000593168 MMP3P08254 477 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 RARBP10826 455 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 NMT1P30419 496 aaKnown RBP14.82□□□□□ -0.04
VMP1-217ENST00000593168 ARL2P36404 184 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 GRIN2CQ14957 1233 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 EMC2Q15006 297 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 KNOP1Q1ED39 458 aaKnown RBP14.82□□□□□ -0.04
VMP1-217ENST00000593168 ZCWPW2Q504Y3 356 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 ZNF484Q5JVG2 852 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.82□□□□□ -0.04
VMP1-217ENST00000593168 CSGALNACT2Q8N6G5 542 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 USP38Q8NB14 1042 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 KCNN1Q92952 543 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 LENG1Q96BZ8 264 aaPredicted RBP14.82□□□□□ -0.04
VMP1-217ENST00000593168 JPH2Q9BR39 696 aaPredicted RBP14.82□□□□□ -0.04
VMP1-217ENST00000593168 C16orf70Q9BSU1 422 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 AP5M1Q9H0R1 490 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 GPRC5CQ9NQ84 441 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 ZNF215Q9UL58 517 aaPredicted RBP14.82□□□□□ -0.04
VMP1-217ENST00000593168 TRAF3IP3Q9Y228 551 aa14.82□□□□□ -0.04
VMP1-217ENST00000593168 IGKV6-21A0A0C4DH24 114 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 A0A1W2PQ45 241 aaPredicted RBP14.81□□□□□ -0.04
VMP1-217ENST00000593168 A0A1W2PQY0 241 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 H3BRB1 525 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 CBFA2T2O43439 604 aa14.81□□□□□ -0.04
VMP1-217ENST00000593168 PQBP1O60828 265 aaKnown RBP14.81□□□□□ -0.04
VMP1-217ENST00000593168 DUSP11O75319 330 aaKnown RBP14.81□□□□□ -0.04
VMP1-217ENST00000593168 SERPINC1P01008 464 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms