RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 OR6J1Q8NGC5 347 aa13.65□□□□□ -0.22
DNMT1-228ENST00000592705 SALL3Q9BXA9 1300 aa13.65□□□□□ -0.22
DNMT1-228ENST00000592705 MANSC4A6NHS7 340 aaPredicted RBP13.65□□□□□ -0.23
DNMT1-228ENST00000592705 MSH2P43246 934 aa13.65□□□□□ -0.23
DNMT1-228ENST00000592705 MIPOL1Q8TD10 442 aa13.65□□□□□ -0.23
DNMT1-228ENST00000592705 COL3A1P02461 1466 aaPredicted RBP13.65□□□□□ -0.23
DNMT1-228ENST00000592705 NCK2O43639 380 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 JAK3P52333 1124 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 PRAMEF18Q5VWM3 479 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 THEM5Q8N1Q8 247 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.64□□□□□ -0.231e-7■■□□□ 14.2
DNMT1-228ENST00000592705 GIPC1O14908 333 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 SRGAP2CP0DJJ0 459 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 GARSP41250 739 aaKnown RBP13.64□□□□□ -0.23
DNMT1-228ENST00000592705 ANKRD40Q6AI12 368 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 GBP7Q8N8V2 638 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-228ENST00000592705 CEP95Q96GE4 821 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 NUF2Q9BZD4 464 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 TAF1DQ9H5J8 278 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-228ENST00000592705 ZNF233A6NK53 670 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 SRGNP10124 158 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 GYS1P13807 737 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 E2F5Q15329 346 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 DNAJC24Q6P3W2 148 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 SPATA4Q8NEY3 305 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 FUCA2Q9BTY2 467 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 TMEM260Q9NX78 707 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 EXOC1LA0A1B0GW35 172 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 HOXA13P31271 388 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-228ENST00000592705 PHKA2P46019 1235 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 HIBCHQ6NVY1 386 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-228ENST00000592705 TAB3Q8N5C8 712 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-228ENST00000592705 IRX2Q9BZI1 471 aaPredicted RBP13.64□□□□□ -0.23
DNMT1-228ENST00000592705 CPVLQ9H3G5 476 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 IFT122Q9HBG6 1241 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 SNX12Q9UMY4 172 aa13.64□□□□□ -0.23
DNMT1-228ENST00000592705 DDNO94850 711 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-228ENST00000592705 BAG2O95816 211 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 MMEP08473 750 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 GUCY2CP25092 1073 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 SESN3P58005 492 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 DEFB115Q30KQ5 88 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 ZNF449Q6P9G9 518 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 MAD1L1Q9Y6D9 718 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 CCDC85CA6NKD9 419 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 DYNC1LI2O43237 492 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-228ENST00000592705 GPC5P78333 572 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 FAM84BQ96KN1 310 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-228ENST00000592705 ATP6V1G3Q96LB4 118 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 SPATA33Q96N06 139 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 F5H6K3 240 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 MCF2LO15068 1137 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 KLRC3Q07444 240 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 ADCY1Q08828 1119 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 PDIA5Q14554 519 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 PDIA6Q15084 440 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 ERO1BQ86YB8 467 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 TRIM9Q9C026 710 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 Q9H521 79 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 SNX24Q9Y343 169 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 RHOBTB3O94955 611 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 NFKBIAP25963 317 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 GCLCP48506 637 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-228ENST00000592705 MTMR1Q13613 665 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 SURF1Q15526 300 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 ARMCX2Q7L311 632 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 RYBPQ8N488 228 aaPredicted RBP13.63□□□□□ -0.23
DNMT1-228ENST00000592705 SLC44A5Q8NCS7 719 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 TBK1Q9UHD2 729 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 HPS5Q9UPZ3 1129 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 USH1CQ9Y6N9 552 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 SCINQ9Y6U3 715 aa13.63□□□□□ -0.23
DNMT1-228ENST00000592705 DIP2BQ9P265 1576 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 GMNCA6NCL1 334 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 A6NJR5 290 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 PPP2R2AP63151 447 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 TKFCQ3LXA3 575 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 HHIPL2Q6UWX4 724 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 NEDD1Q8NHV4 660 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 DDX23Q9BUQ8 820 aaKnown RBP13.62□□□□□ -0.23
DNMT1-228ENST00000592705 POTEB3A0JP26 581 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 SFI1A8K8P3 1242 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 POTECB2RU33 542 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 KIF3CO14782 793 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 WDR46O15213 610 aaKnown RBP13.62□□□□□ -0.23
DNMT1-228ENST00000592705 TXNP10599 105 aaKnown RBP13.62□□□□□ -0.23
DNMT1-228ENST00000592705 FXR1P51114 621 aaKnown RBP eCLIP13.62□□□□□ -0.236e-7■■■■□ 19.4
DNMT1-228ENST00000592705 PRELPP51888 382 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 POTEBQ6S5H4 581 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.62□□□□□ -0.23
DNMT1-228ENST00000592705 CHP1Q99653 195 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-228ENST00000592705 LRRD1A4D1F6 860 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 MED7O43513 233 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 SEPT6Q14141 434 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 TRIP13Q15645 432 aaPredicted RBP13.62□□□□□ -0.23
DNMT1-228ENST00000592705 RAD9BQ6WBX8 426 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 C7orf25Q9BPX7 421 aa13.62□□□□□ -0.23
DNMT1-228ENST00000592705 CPSF3Q9UKF6 684 aaKnown RBP13.62□□□□□ -0.23
DNMT1-228ENST00000592705 MT-ND3P03897 115 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms