RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 PIGOQ8TEQ8 1089 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 TMEM143Q96AN5 459 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 NLRP4Q96MN2 994 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 C11orf84Q9BUA3 381 aaPredicted RBP15.53■□□□□ 0.08
CLIP3-205ENST00000592017 UBE2ZQ9H832 354 aaPredicted RBP15.53■□□□□ 0.08
CLIP3-205ENST00000592017 TUFT1Q9NNX1 390 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 C1orf112Q9NSG2 853 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 RWDD3Q9Y3V2 267 aa15.53■□□□□ 0.08
CLIP3-205ENST00000592017 MYH9P35579 1960 aaKnown RBP15.53■□□□□ 0.08
CLIP3-205ENST00000592017 BRWD1Q9NSI6 2320 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 COL4A4P53420 1690 aaPredicted RBP15.52■□□□□ 0.08
CLIP3-205ENST00000592017 CSDE1O75534 798 aaKnown RBP15.52■□□□□ 0.08
CLIP3-205ENST00000592017 LYPLA2O95372 231 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 HSP90AA1P07900 732 aaKnown RBP15.52■□□□□ 0.08
CLIP3-205ENST00000592017 FGFR4P22455 802 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 CCT6AP40227 531 aaKnown RBP15.52■□□□□ 0.08
CLIP3-205ENST00000592017 FXR2P51116 673 aaKnown RBP eCLIP15.52■□□□□ 0.08
CLIP3-205ENST00000592017 CAMK1Q14012 370 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 TIGD5Q53EQ6 642 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 POTEGQ6S5H5 508 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 CATSPER3Q86XQ3 398 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 MTRQ99707 1265 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 PLVAPQ9BX97 442 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 RAB34Q9BZG1 259 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 DHX33Q9H6R0 707 aaKnown RBP15.52■□□□□ 0.08
CLIP3-205ENST00000592017 ALG13Q9NP73 1137 aaKnown RBP15.52■□□□□ 0.08
CLIP3-205ENST00000592017 LRWD1Q9UFC0 647 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 PLAGL2Q9UPG8 496 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 PPME1Q9Y570 386 aa15.52■□□□□ 0.08
CLIP3-205ENST00000592017 A0A087WZ62 844 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 LAD1O00515 517 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 USO1O60763 962 aaKnown RBP15.51■□□□□ 0.07
CLIP3-205ENST00000592017 SPATA31C1P0DKV0 1188 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 FGFR1P11362 822 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 SYT1P21579 422 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 DNAJB1P25685 340 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 RARRES1P49788 294 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 DTHD1Q6ZMT9 781 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 BRAPQ7Z569 592 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 KSR1Q8IVT5 923 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 EXOC8Q8IYI6 725 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 SNX29Q8TEQ0 813 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 PSPC1Q8WXF1 523 aaKnown RBP15.51■□□□□ 0.07
CLIP3-205ENST00000592017 FDXACB1Q9BRP7 624 aaPredicted RBP15.51■□□□□ 0.07
CLIP3-205ENST00000592017 POLR3CQ9BUI4 534 aaPredicted RBP15.51■□□□□ 0.07
CLIP3-205ENST00000592017 GCOM2Q9BZD3 368 aaPredicted RBP15.51■□□□□ 0.07
CLIP3-205ENST00000592017 LMAN2LQ9H0V9 348 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 NSUN3Q9H649 340 aaKnown RBP15.51■□□□□ 0.07
CLIP3-205ENST00000592017 ATP6V0A4Q9HBG4 840 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 ANKEF1Q9NU02 776 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 RNF19AQ9NV58 838 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 TMEM161AQ9NX61 479 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 HCSTQ9UBK5 93 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 COL4A3BPQ9Y5P4 624 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 MYO7AQ13402 2215 aa15.51■□□□□ 0.07
CLIP3-205ENST00000592017 TBKBP1A7MCY6 615 aa15.5■□□□□ 0.07
CLIP3-205ENST00000592017 PP2D1A8MPX8 630 aa15.5■□□□□ 0.07
CLIP3-205ENST00000592017 ITGB1P05556 798 aa15.5■□□□□ 0.07
CLIP3-205ENST00000592017 KCNA5P22460 613 aa15.5■□□□□ 0.07
CLIP3-205ENST00000592017 RPA1P27694 616 aa15.5■□□□□ 0.07
CLIP3-205ENST00000592017 PRPHP41219 470 aa15.5■□□□□ 0.07
CLIP3-205ENST00000592017 ATP2C1P98194 919 aaPredicted RBP15.5■□□□□ 0.07
CLIP3-205ENST00000592017 COL19A1Q14993 1142 aa15.5■□□□□ 0.07
CLIP3-205ENST00000592017 KLHL23Q8NBE8 558 aa15.5■□□□□ 0.07
CLIP3-205ENST00000592017 SPPL3Q8TCT6 385 aa15.5■□□□□ 0.07
CLIP3-205ENST00000592017 TCP11Q8WWU5 503 aa15.5■□□□□ 0.07
CLIP3-205ENST00000592017 ELAC1Q9H777 363 aaKnown RBP15.5■□□□□ 0.07
CLIP3-205ENST00000592017 VWA3AA6NCI4 1184 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 GAS2O43903 313 aaKnown RBP15.49■□□□□ 0.07
CLIP3-205ENST00000592017 DGAT1O75907 488 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 CSPG5O95196 566 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 SRGAP2CP0DJJ0 459 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 CDC42EP1Q00587 391 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 ZRSR1Q15695 479 aaKnown RBP15.49■□□□□ 0.07
CLIP3-205ENST00000592017 IL17AQ16552 155 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 LEXMQ3ZCV2 418 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 KRT79Q5XKE5 535 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 MAEAQ7L5Y9 396 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 ZNF410Q86VK4 478 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 ECHDC2Q86YB7 292 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 IGSF22Q8N9C0 903 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 SPRYD3Q8NCJ5 442 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.49■□□□□ 0.07
CLIP3-205ENST00000592017 PRPF31Q8WWY3 499 aaKnown RBP15.49■□□□□ 0.07
CLIP3-205ENST00000592017 P2RX5Q93086 422 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 NACC1Q96RE7 527 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 XPNPEP1Q9NQW7 623 aa15.49■□□□□ 0.07
CLIP3-205ENST00000592017 TYW1Q9NV66 732 aaKnown RBP15.49■□□□□ 0.07
CLIP3-205ENST00000592017 ARHGEF35A5YM69 484 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 H3BQ06 376 aaPredicted RBP15.48■□□□□ 0.07
CLIP3-205ENST00000592017 STX6O43752 255 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 ZSCAN20P17040 1043 aaPredicted RBP15.48■□□□□ 0.07
CLIP3-205ENST00000592017 SFPQP23246 707 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLIP3-205ENST00000592017 CDC25AP30304 524 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 LAMTOR4Q0VGL1 99 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 HYAL1Q12794 435 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 RESTQ13127 1097 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 NAALADL2Q58DX5 795 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 LRRC55Q6ZSA7 311 aa15.48■□□□□ 0.07
CLIP3-205ENST00000592017 ZNF598Q86UK7 904 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms