RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 BEND4Q6ZU67 534 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 TMEM179Q6ZVK1 233 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 C16orf86Q6ZW13 317 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 EEPD1Q7L9B9 569 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 U2AF1L4Q8WU68 220 aaKnown RBP8.93□□□□□ -0.98
VMP1-213ENST00000591877 TRIB2Q92519 343 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 RPAP3Q9H6T3 665 aaPredicted RBP8.93□□□□□ -0.98
VMP1-213ENST00000591877 CNNM2Q9H8M5 875 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 EPB41L4AQ9HCS5 686 aaPredicted RBP8.93□□□□□ -0.98
VMP1-213ENST00000591877 PAK6Q9NQU5 681 aaPredicted RBP8.93□□□□□ -0.98
VMP1-213ENST00000591877 BTBD7Q9P203 1132 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 RABGAP1Q9Y3P9 1069 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 TTC41PQ6P2S7 1318 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 FRMPD3Q5JV73 1810 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 ZNFX1Q9P2E3 1918 aaKnown RBP8.93□□□□□ -0.98
VMP1-213ENST00000591877 MYH4Q9Y623 1939 aa8.93□□□□□ -0.98
VMP1-213ENST00000591877 ESYT3A0FGR9 886 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 SLC22A31A6NKX4 558 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 DDX3YO15523 660 aaKnown RBP8.92□□□□□ -0.98
VMP1-213ENST00000591877 DNAJC6O75061 913 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 ECEL1O95672 775 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 HMGCRP04035 888 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 PLCG1P19174 1290 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 CYP2B6P20813 491 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 LONRF2Q1L5Z9 754 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 SBK1Q52WX2 424 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 ZC3H12AQ5D1E8 599 aaKnown RBP8.92□□□□□ -0.98
VMP1-213ENST00000591877 C6orf15Q6UXA7 325 aaPredicted RBP8.92□□□□□ -0.98
VMP1-213ENST00000591877 GPR142Q7Z601 462 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 ATG4CQ96DT6 458 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 DEFB118Q96PH6 123 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 SEC62Q99442 399 aaKnown RBP8.92□□□□□ -0.98
VMP1-213ENST00000591877 SPC25Q9HBM1 224 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 TMX2Q9Y320 296 aa8.92□□□□□ -0.98
VMP1-213ENST00000591877 ROBO3Q96MS0 1386 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 UPK3BL1B0FP48 263 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 UPK3BL2E5RIL1 263 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 GPAA1O43292 621 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 ZFYP08048 801 aaPredicted RBP8.91□□□□□ -0.98
VMP1-213ENST00000591877 SLFN14P0C7P3 912 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 MX1P20591 662 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 MAPK4P31152 587 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 CCNFP41002 786 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 ICA1Q05084 483 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 RING1Q06587 406 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 SQSTM1Q13501 440 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 HDAC1Q13547 482 aaPredicted RBP8.91□□□□□ -0.98
VMP1-213ENST00000591877 CCL14Q16627 93 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 ZC3H12BQ5HYM0 836 aaKnown RBP8.91□□□□□ -0.98
VMP1-213ENST00000591877 MAP3K21Q5TCX8 1036 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 PLEKHH3Q7Z736 793 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 POU5F2Q8N7G0 328 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 CCDC17Q96LX7 622 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 MFSD14AQ96MC6 490 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.91□□□□□ -0.98
VMP1-213ENST00000591877 VCPKMTQ9H867 229 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 KANSL2Q9H9L4 492 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 ARPP21Q9UBL0 812 aaPredicted RBP8.91□□□□□ -0.98
VMP1-213ENST00000591877 PCDHGC5Q9Y5F6 944 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 CORINQ9Y5Q5 1042 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 ZNF236Q9UL36 1845 aa8.91□□□□□ -0.98
VMP1-213ENST00000591877 RPTORQ8N122 1335 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 LOC100289279A0A1B0GTE1 492 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 ERC2O15083 957 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 FOXP2O15409 715 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 SART1O43290 800 aaKnown RBP8.9□□□□□ -0.98
VMP1-213ENST00000591877 GLRX3O76003 335 aaKnown RBP8.9□□□□□ -0.98
VMP1-213ENST00000591877 CTSBP07858 339 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 ACRP10323 421 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 EEF2P13639 858 aaKnown RBP8.9□□□□□ -0.98
VMP1-213ENST00000591877 COG2Q14746 738 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 ANKRD45Q5TZF3 282 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 UNC5AQ6ZN44 842 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 FILIP1Q7Z7B0 1213 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 IFNL3Q8IZI9 196 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 SPICE1Q8N0Z3 855 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 STK11IPQ8N1F8 1099 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 UBASH3BQ8TF42 649 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 SOCS4Q8WXH5 440 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 KLHDC7BQ96G42 594 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 FLRT1Q9NZU1 646 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 STAP2Q9UGK3 403 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 ZMYM5Q9UJ78 669 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 COL4A3BPQ9Y5P4 624 aa8.9□□□□□ -0.98
VMP1-213ENST00000591877 IGKV6D-41A0A0C4DH26 115 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 H0YGN5 161 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 FARP2O94887 1054 aaPredicted RBP8.89□□□□□ -0.99
VMP1-213ENST00000591877 TFRCP02786 760 aaKnown RBP8.89□□□□□ -0.99
VMP1-213ENST00000591877 RGS2P41220 211 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 CACNB2Q08289 660 aaPredicted RBP8.89□□□□□ -0.99
VMP1-213ENST00000591877 SSRP1Q08945 709 aaKnown RBP8.89□□□□□ -0.99
VMP1-213ENST00000591877 MRM1Q6IN84 353 aaKnown RBP8.89□□□□□ -0.99
VMP1-213ENST00000591877 VHLLQ6RSH7 139 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 AMOTL1Q8IY63 956 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 NPLOC4Q8TAT6 608 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 DIS3LQ8TF46 1054 aaKnown RBP8.89□□□□□ -0.99
VMP1-213ENST00000591877 LPAR1Q92633 364 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 GCC1Q96CN9 775 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 ASIC4Q96FT7 647 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 FSD1Q9BTV5 496 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms