RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 ACRBPQ8NEB7 543 aa14.27□□□□□ -0.12
SMARCA4-216ENST00000591545 TTC1Q99614 292 aa14.27□□□□□ -0.12
SMARCA4-216ENST00000591545 NUDT12Q9BQG2 462 aa14.27□□□□□ -0.12
SMARCA4-216ENST00000591545 UBE2TQ9NPD8 197 aaPredicted RBP14.27□□□□□ -0.12
SMARCA4-216ENST00000591545 GCNT4Q9P109 453 aa14.27□□□□□ -0.12
SMARCA4-216ENST00000591545 SLC9A2Q9UBY0 812 aa14.27□□□□□ -0.12
SMARCA4-216ENST00000591545 SCOCQ9UIL1 159 aa14.27□□□□□ -0.12
SMARCA4-216ENST00000591545 PCDHA10Q9Y5I2 948 aa14.27□□□□□ -0.12
SMARCA4-216ENST00000591545 LRRN2O75325 713 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 ZBTB17Q13105 803 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 GANCQ8TET4 914 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 HDAC11Q96DB2 347 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 FMO2Q99518 471 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 BARHL2Q9NY43 387 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 LCMT1Q9UIC8 334 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 SOWAHDA6NJG2 315 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 MFAP3LO75121 409 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 SMIM24O75264 130 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 MT-ND3P03897 115 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 GYS1P13807 737 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 SCARA5Q6ZMJ2 495 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 RHOT2Q8IXI1 618 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 PDZD8Q8NEN9 1154 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 ANO9A1A5B4 782 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 VEGFAP15692 232 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 USP11P51784 963 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 TTBK2Q6IQ55 1244 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 DYDC2Q96IM9 177 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 VCPKMTQ9H867 229 aa14.27□□□□□ -0.13
SMARCA4-216ENST00000591545 GTF2A2P52657 109 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 SBK1Q52WX2 424 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 BPIFA3Q9BQP9 254 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 MTMR4Q9NYA4 1195 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 DYNC1LI2O43237 492 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 MOCS3O95396 460 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 FCGRTP55899 365 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 TMED2Q15363 201 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 TCP11X2Q5H9J9 407 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 SKA2Q8WVK7 121 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 TPX2Q9ULW0 747 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 LMNAP02545 664 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 KRT1P04264 644 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 PNMA6AP0CW24 399 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 TTC19Q6DKK2 380 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 MB21D2Q8IYB1 491 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 PAGE5Q96GU1 130 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 NDST4Q9H3R1 872 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 LY9Q9HBG7 655 aa14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 ARHGEF28Q8N1W1 1705 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 SRRM1Q8IYB3 904 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 SAMSN1Q9NSI8 373 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 PACSIN2Q9UNF0 486 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-216ENST00000591545 SPECC1L-ADORA2AF8WAN1 911 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 PODXLO00592 558 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 NDUFB10O96000 172 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 GH1P01241 217 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 STAT5BP51692 787 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 DR1Q01658 176 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 SCN4BQ8IWT1 228 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 CCNYQ8ND76 341 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 ZC3H15Q8WU90 426 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 MXD3Q9BW11 206 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 MRPL4Q9BYD3 311 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 ZMYND12Q9H0C1 365 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 SUDS3Q9H7L9 328 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 TMEM131LA2VDJ0 1609 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 MAP3K7O43318 606 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 RARBP10826 455 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 KYAT1Q16773 422 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 PRAMEF18Q5VWM3 479 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 RNF219Q5W0B1 726 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 FBXO33Q7Z6M2 555 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 FAM133AQ8N9E0 248 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 ZNF579Q8NAF0 562 aaKnown RBP14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 SERPINI1Q99574 410 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 DIP2BQ9P265 1576 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 F8W8V4 182 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 EPHX2P34913 555 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 RCN2Q14257 317 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 PDCD2Q16342 344 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 UNC13DQ70J99 1090 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 NDUFAF2Q8N183 169 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 XXYLT1Q8NBI6 393 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 JPH1Q9HDC5 661 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 POTEMA6NI47 508 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 SFI1A8K8P3 1242 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 DEUP1Q05D60 604 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 SEMA3FQ13275 785 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 ZNF512BQ96KM6 892 aaPredicted RBP14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 ABCB6Q9NP58 842 aa14.25□□□□□ -0.13
SMARCA4-216ENST00000591545 PFASO15067 1338 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 MYOM1P52179 1685 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 MIF4GDA9UHW6 222 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 PRPSAP2O60256 369 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 FTCDO95954 541 aa14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 RECQLP46063 649 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 BAATQ14032 418 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-216ENST00000591545 ZKSCAN8Q15776 578 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms