RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 BHMT2Q9H2M3 363 aa16.9■□□□□ 0.3
CXXC1-214ENST00000590901 DDX20Q9UHI6 824 aaKnown RBP16.9■□□□□ 0.3
CXXC1-214ENST00000590901 DOCK1Q14185 1865 aa16.9■□□□□ 0.3
CXXC1-214ENST00000590901 PARP14Q460N5 1801 aa16.9■□□□□ 0.3
CXXC1-214ENST00000590901 SLITRK3O94933 977 aa16.9■□□□□ 0.3
CXXC1-214ENST00000590901 HSPA9P38646 679 aaKnown RBP16.9■□□□□ 0.3
CXXC1-214ENST00000590901 SATB1Q01826 763 aa16.9■□□□□ 0.3
CXXC1-214ENST00000590901 LRIG3Q6UXM1 1119 aa16.9■□□□□ 0.3
CXXC1-214ENST00000590901 SLFN12Q8IYM2 578 aa16.9■□□□□ 0.3
CXXC1-214ENST00000590901 ANKRD13CQ8N6S4 541 aa16.9■□□□□ 0.3
CXXC1-214ENST00000590901 SYTL5Q8TDW5 730 aaPredicted RBP16.9■□□□□ 0.3
CXXC1-214ENST00000590901 DYDC2Q96IM9 177 aa16.9■□□□□ 0.3
CXXC1-214ENST00000590901 PCDHA2Q9Y5H9 948 aa16.9■□□□□ 0.3
CXXC1-214ENST00000590901 TMEM150BA6NC51 233 aa16.89■□□□□ 0.3
CXXC1-214ENST00000590901 IBSPP21815 317 aaPredicted RBP16.89■□□□□ 0.3
CXXC1-214ENST00000590901 KCNA1Q09470 495 aa16.89■□□□□ 0.3
CXXC1-214ENST00000590901 ANKRD20A8PQ5CZ79 823 aa16.89■□□□□ 0.3
CXXC1-214ENST00000590901 LRCH2Q5VUJ6 765 aa16.89■□□□□ 0.3
CXXC1-214ENST00000590901 NSMFQ6X4W1 530 aa16.89■□□□□ 0.3
CXXC1-214ENST00000590901 RNF10Q8N5U6 811 aaKnown RBP16.89■□□□□ 0.3
CXXC1-214ENST00000590901 LPAR1Q92633 364 aa16.89■□□□□ 0.3
CXXC1-214ENST00000590901 CCDC47Q96A33 483 aaKnown RBP16.89■□□□□ 0.3
CXXC1-214ENST00000590901 UNC45AQ9H3U1 944 aa16.89■□□□□ 0.3
CXXC1-214ENST00000590901 MAGEF1Q9HAY2 307 aa16.89■□□□□ 0.3
CXXC1-214ENST00000590901 PLCB1Q9NQ66 1216 aa16.89■□□□□ 0.3
CXXC1-214ENST00000590901 PANK4Q9NVE7 773 aa16.89■□□□□ 0.3
CXXC1-214ENST00000590901 ATP9AO75110 1047 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 RPA1P27694 616 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 AMPD3Q01432 767 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 CRYMQ14894 314 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 C9orf131Q5VYM1 1079 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 FAM228AQ86W67 206 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 TPH2Q8IWU9 490 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 CLMNQ96JQ2 1002 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 KRT12Q99456 494 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 HSD17B14Q9BPX1 270 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 OSBPL7Q9BZF2 842 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 HAUS2Q9NVX0 235 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 TPX2Q9ULW0 747 aaKnown RBP16.89■□□□□ 0.29
CXXC1-214ENST00000590901 SIK3Q9Y2K2 1263 aa16.89■□□□□ 0.29
CXXC1-214ENST00000590901 RBBP6Q7Z6E9 1792 aaKnown RBP16.89■□□□□ 0.29
CXXC1-214ENST00000590901 GRID2IPA4D2P6 1211 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 DNM1LO00429 736 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 BUB1O43683 1085 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 VGLL4Q14135 290 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 CENPPQ6IPU0 288 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 SCLT1Q96NL6 688 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 PICK1Q9NRD5 415 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 DNAH12Q6ZR08 3092 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 EPHB6O15197 1021 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 SORBS3O60504 671 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 MYZAPP0CAP1 466 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 FSTL1Q12841 308 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 TMEM132BQ14DG7 1078 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 TREML2Q5T2D2 321 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 REPS2Q8NFH8 660 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■■■■□ 25.7
CXXC1-214ENST00000590901 FAM20AQ96MK3 541 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 REEP2Q9BRK0 252 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 KCNH7Q9NS40 1196 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 FAM207AQ9NSI2 230 aaPredicted RBP16.88■□□□□ 0.29
CXXC1-214ENST00000590901 BRCA2P51587 3418 aa16.88■□□□□ 0.29
CXXC1-214ENST00000590901 TRAPPC3O43617 180 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 SLC8A1P32418 973 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 HOXD13P35453 343 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 PPP1R2P41236 205 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 IFFO1Q0D2I5 559 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 GIT2Q14161 759 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 HERC4Q5GLZ8 1057 aaPredicted RBP16.87■□□□□ 0.29
CXXC1-214ENST00000590901 APOBEC3FQ8IUX4 373 aaKnown RBP16.87■□□□□ 0.29
CXXC1-214ENST00000590901 KSR1Q8IVT5 923 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 SLC5A5Q92911 643 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 ZNF577Q9BSK1 485 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.87■□□□□ 0.29
CXXC1-214ENST00000590901 SNCAIPQ9Y6H5 919 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 PVALEFA0A1B0GWK0 134 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 TBX3O15119 743 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 BAATQ14032 418 aaPredicted RBP16.87■□□□□ 0.29
CXXC1-214ENST00000590901 SPRED3Q2MJR0 410 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 DCAF15Q66K64 600 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 CNNM4Q6P4Q7 775 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 RRAGAQ7L523 313 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.87■□□□□ 0.29
CXXC1-214ENST00000590901 ATP6V0A4Q9HBG4 840 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 SLC12A6Q9UHW9 1150 aa16.87■□□□□ 0.29
CXXC1-214ENST00000590901 ZNF214Q9UL59 606 aaPredicted RBP16.87■□□□□ 0.29
CXXC1-214ENST00000590901 LRRC53A6NM62 1247 aa16.86■□□□□ 0.29
CXXC1-214ENST00000590901 IPO5O00410 1097 aaKnown RBP16.86■□□□□ 0.29
CXXC1-214ENST00000590901 DHX15O43143 795 aaKnown RBP16.86■□□□□ 0.29
CXXC1-214ENST00000590901 MYCLP12524 364 aaPredicted RBP16.86■□□□□ 0.29
CXXC1-214ENST00000590901 SCTRP47872 440 aa16.86■□□□□ 0.29
CXXC1-214ENST00000590901 CLNS1AP54105 237 aaKnown RBP16.86■□□□□ 0.29
CXXC1-214ENST00000590901 VWA3BQ502W6 1294 aa16.86■□□□□ 0.29
CXXC1-214ENST00000590901 LACTB2Q53H82 288 aaPredicted RBP16.86■□□□□ 0.29
CXXC1-214ENST00000590901 TAX1BP1Q86VP1 789 aa16.86■□□□□ 0.29
CXXC1-214ENST00000590901 CACNA2D3Q8IZS8 1091 aa16.86■□□□□ 0.29
CXXC1-214ENST00000590901 SCFD1Q8WVM8 642 aa16.86■□□□□ 0.29
CXXC1-214ENST00000590901 SEC16BQ96JE7 1060 aa16.86■□□□□ 0.29
CXXC1-214ENST00000590901 MMRN2Q9H8L6 949 aa16.86■□□□□ 0.29
CXXC1-214ENST00000590901 AFG3L2Q9Y4W6 797 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms