RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 A0A087WZ62 844 aa24.45■■□□□ 1.5
DDX39A-215ENST00000590696 ATF7P17544 494 aaPredicted RBP24.45■■□□□ 1.5
DDX39A-215ENST00000590696 HFE2Q6ZVN8 426 aa24.45■■□□□ 1.5
DDX39A-215ENST00000590696 FDXACB1Q9BRP7 624 aaPredicted RBP24.45■■□□□ 1.5
DDX39A-215ENST00000590696 PHF7Q9BWX1 381 aaPredicted RBP24.45■■□□□ 1.5
DDX39A-215ENST00000590696 NGRNQ9NPE2 291 aaKnown RBP24.45■■□□□ 1.5
DDX39A-215ENST00000590696 CHST12Q9NRB3 414 aa24.45■■□□□ 1.5
DDX39A-215ENST00000590696 HIDE1A8MVS5 230 aa24.44■■□□□ 1.5
DDX39A-215ENST00000590696 SLC37A4O43826 429 aa24.44■■□□□ 1.5
DDX39A-215ENST00000590696 MAFO75444 373 aaPredicted RBP24.44■■□□□ 1.5
DDX39A-215ENST00000590696 PSMC5P62195 406 aa24.44■■□□□ 1.5
DDX39A-215ENST00000590696 KCNC3Q14003 757 aa24.44■■□□□ 1.5
DDX39A-215ENST00000590696 LETM2Q2VYF4 491 aa24.44■■□□□ 1.5
DDX39A-215ENST00000590696 TMEM184AQ6ZMB5 413 aa24.44■■□□□ 1.5
DDX39A-215ENST00000590696 TMC7Q7Z402 723 aa24.44■■□□□ 1.5
DDX39A-215ENST00000590696 EDAQ92838 391 aa24.44■■□□□ 1.5
DDX39A-215ENST00000590696 SUCLA2Q9P2R7 463 aaPredicted RBP24.44■■□□□ 1.5
DDX39A-215ENST00000590696 SRGAP2BP0DMP2 458 aa24.43■■□□□ 1.5
DDX39A-215ENST00000590696 TECP42680 631 aa24.43■■□□□ 1.5
DDX39A-215ENST00000590696 SCRN1Q12765 414 aa24.43■■□□□ 1.5
DDX39A-215ENST00000590696 CBX2Q14781 532 aaPredicted RBP24.43■■□□□ 1.5
DDX39A-215ENST00000590696 LLGL2Q6P1M3 1020 aa24.43■■□□□ 1.5
DDX39A-215ENST00000590696 ANO5Q75V66 913 aa24.43■■□□□ 1.5
DDX39A-215ENST00000590696 RHPN2Q8IUC4 686 aa24.43■■□□□ 1.5
DDX39A-215ENST00000590696 SLC39A11Q8N1S5 342 aa24.43■■□□□ 1.5
DDX39A-215ENST00000590696 SUSD6Q92537 303 aa24.43■■□□□ 1.5
DDX39A-215ENST00000590696 RPGRIP1Q96KN7 1286 aa24.43■■□□□ 1.5
DDX39A-215ENST00000590696 PHF20Q9BVI0 1012 aa24.43■■□□□ 1.5
DDX39A-215ENST00000590696 CCDC194A0A1B0GVG4 234 aa24.42■■□□□ 1.5
DDX39A-215ENST00000590696 EML1O00423 815 aa24.42■■□□□ 1.5
DDX39A-215ENST00000590696 CDKL5O76039 1030 aa24.42■■□□□ 1.5
DDX39A-215ENST00000590696 SFPQP23246 707 aaKnown RBP eCLIP24.42■■□□□ 1.5
DDX39A-215ENST00000590696 PLA2G4FQ68DD2 849 aa24.42■■□□□ 1.5
DDX39A-215ENST00000590696 ANKRD54Q6NXT1 300 aa24.42■■□□□ 1.5
DDX39A-215ENST00000590696 ZNF410Q86VK4 478 aa24.42■■□□□ 1.5
DDX39A-215ENST00000590696 MRPL9Q9BYD2 267 aaKnown RBP24.42■■□□□ 1.5
DDX39A-215ENST00000590696 INO80BQ9C086 356 aaPredicted RBP24.42■■□□□ 1.5
DDX39A-215ENST00000590696 S1PR5Q9H228 398 aa24.42■■□□□ 1.5
DDX39A-215ENST00000590696 SLKQ9H2G2 1235 aaPredicted RBP24.42■■□□□ 1.5
DDX39A-215ENST00000590696 NT5C1B-RDH14C9J2C7 533 aa24.41■■□□□ 1.5
DDX39A-215ENST00000590696 PHKA2P46019 1235 aa24.41■■□□□ 1.5
DDX39A-215ENST00000590696 PPP2R5CQ13362 524 aa24.41■■□□□ 1.5
DDX39A-215ENST00000590696 TWF2Q6IBS0 349 aaKnown RBP24.41■■□□□ 1.5
DDX39A-215ENST00000590696 KSR1Q8IVT5 923 aa24.41■■□□□ 1.5
DDX39A-215ENST00000590696 FAM20AQ96MK3 541 aa24.41■■□□□ 1.5
DDX39A-215ENST00000590696 JPH2Q9BR39 696 aaPredicted RBP24.41■■□□□ 1.5
DDX39A-215ENST00000590696 KCNMB3Q9NPA1 279 aa24.41■■□□□ 1.5
DDX39A-215ENST00000590696 VAV3Q9UKW4 847 aa24.41■■□□□ 1.5
DDX39A-215ENST00000590696 PIN4Q9Y237 131 aaKnown RBP24.41■■□□□ 1.5
DDX39A-215ENST00000590696 DTNBO60941 627 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 QARSP47897 775 aaKnown RBP24.4■■□□□ 1.5
DDX39A-215ENST00000590696 ALDH7A1P49419 539 aaKnown RBP24.4■■□□□ 1.5
DDX39A-215ENST00000590696 BCAR1P56945 870 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 LONRF3Q496Y0 759 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 PPP4R3AQ6IN85 833 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 SYCE2Q6PIF2 218 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 NEK8Q86SG6 692 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 LPPQ93052 612 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 MFSD14AQ96MC6 490 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 NLRP4Q96MN2 994 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 TRAIPQ9BWF2 469 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 APOL5Q9BWW9 433 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 CYP26B1Q9NR63 512 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 GJB4Q9NTQ9 266 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 TRIOO75962 3097 aa24.4■■□□□ 1.5
DDX39A-215ENST00000590696 XBP1P17861 261 aa24.39■■□□□ 1.49
DDX39A-215ENST00000590696 NPEPPSP55786 919 aa24.39■■□□□ 1.49
DDX39A-215ENST00000590696 SMC1AQ14683 1233 aaKnown RBP24.39■■□□□ 1.49
DDX39A-215ENST00000590696 CATSPER4Q7RTX7 472 aa24.39■■□□□ 1.49
DDX39A-215ENST00000590696 MRPL43Q8N983 215 aaKnown RBP24.39■■□□□ 1.49
DDX39A-215ENST00000590696 STK36Q9NRP7 1315 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 C2orf71A6NGG8 1288 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 CCNT1O60563 726 aaKnown RBP24.38■■□□□ 1.49
DDX39A-215ENST00000590696 DKC1O60832 514 aaKnown RBP eCLIP24.38■■□□□ 1.49
DDX39A-215ENST00000590696 P4HBP07237 508 aaKnown RBP24.38■■□□□ 1.49
DDX39A-215ENST00000590696 SKIP12755 728 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 GCFC2P16383 781 aaKnown RBP24.38■■□□□ 1.49
DDX39A-215ENST00000590696 ZXDAP98168 799 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 TRIM67Q6ZTA4 783 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 PIK3AP1Q6ZUJ8 805 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 ZNF579Q8NAF0 562 aaKnown RBP24.38■■□□□ 1.49
DDX39A-215ENST00000590696 OXER1Q8TDS5 423 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 TMEM169Q96HH4 297 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 FBXL18Q96ME1 805 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 KCNH6Q9H252 994 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 FAM105AQ9NUU6 356 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 TPCN1Q9ULQ1 816 aa24.38■■□□□ 1.49
DDX39A-215ENST00000590696 PFKFB2O60825 505 aa24.37■■□□□ 1.49
DDX39A-215ENST00000590696 ZC3H11AO75152 810 aaKnown RBP eCLIP24.37■■□□□ 1.49
DDX39A-215ENST00000590696 HOXB8P17481 243 aaPredicted RBP24.37■■□□□ 1.49
DDX39A-215ENST00000590696 CA8P35219 290 aa24.37■■□□□ 1.49
DDX39A-215ENST00000590696 SLC7A3Q8WY07 619 aa24.37■■□□□ 1.49
DDX39A-215ENST00000590696 HAS1Q92839 578 aa24.37■■□□□ 1.49
DDX39A-215ENST00000590696 CASP10Q92851 521 aa24.37■■□□□ 1.49
DDX39A-215ENST00000590696 CEP170P1Q96L14 293 aa24.37■■□□□ 1.49
DDX39A-215ENST00000590696 IFT122Q9HBG6 1241 aa24.37■■□□□ 1.49
DDX39A-215ENST00000590696 WRAP73Q9P2S5 460 aaPredicted RBP24.37■■□□□ 1.49
DDX39A-215ENST00000590696 COL4A3BPQ9Y5P4 624 aa24.37■■□□□ 1.49
DDX39A-215ENST00000590696 TMEM221A6NGB7 291 aa24.36■■□□□ 1.49
DDX39A-215ENST00000590696 MEIS3P2A8K0S8 358 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms